Submission Results
Sequence Name: Not Available
GenBank Accession Number: VYSA01000001.1
GenInfo (GI) Number: 0000000000
Download Results: VYSA01000001.1.PHASTER.zip
gi|00000000|ref|VYSA01000001.1| Microbacterium rhizomatis strain JCM 30598 Scaffold1, whole genome 1811712, gc%: 68.50%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 16.9Kb | incomplete | 50 | 21 | 32076-49019 info_outline | PHAGE_Strept_phiBT1_NC_004664(3) | 66.64% | Show info_outline |
Region DNA
>1 32076-49019 ATGACAGATATCAAGGGCGGCTATCAGCGGCCGACAGCATCGAGCTACGTCAGCAGTTCG TGGGAAGACCACAAAGACCGGCCGACACCGTCGACCGAGCCAGGCACCGATTACGGAGTC GCGTACGGCACGACGCTGTACGCGCCCGAAGATTTCGAGGTGATCGGAGTCGATCACAGC AATGACGGCCCCGAGGGGCGCCGTCTGAGCCTGCTGCTCGGCGACGGCTCGCCGACGAGC TCGATTCACCTCTCTGAGATCTGGGTGAGCGAAGGGCAGCGGGGCAAGCGTGGCGACGCG GTCGGAAAGACTGGCGCGTCGGCGTGGGGCTCGGACTGGGGTGTCGGCGCGCACGTGCAC CAGACGCTCTGGGAGAACATGCCGATCCGTTTCGGCACCTGGGCGACGATCGACTTCGAG GCGCGGGTCGGCGACGACAACGACGGTGCCACGCTGTTCGATCAGACTGTCGCGCTCGAG CAGGCGTTCCTGAACGCGGCTCAGGGCGAATCGCTGGTCGTCGACGGGATCTTCGTCGAA ACACTCCCGGACGGTTCCGAGGGCAAGACGAAGGCCGCGATCAAGCGCTACCAGACGTAC CTCAAGGGGCGCGGCTGGTATGACGGCGAGATCGACGGCTACTGGGGCGGGCAGACGCAG GCCGGCCACGAGAAGCGCTATCCGGAGTGGGTCGCCGAGACGACCCCGGCCCCGAATCCG AGCTATCACACGGCGACGGTCGCGGATCTCGCCGAGCTCGAGTACGTCAACGGCTTGCAG AAGATCGCGCACCTGTACGGGTACGGGGCGAATCAGGCGCAGGAATCCTGGATGGACAAC CGCTGGGGTGGCGGATCGCAAAGCGGACTTCAGGCGTTCCTCGATCAGAATCACGGCGGG TCGCTCGCGACCTGGCTGCGCTCGAGGTGGGGCTACTCGGATAACGACGATCTCTGGGGG CCGAACATGCGGGCCGCTGCTGTCCGCGCCGAGCACGAGAACTTCCTGGCCCTGTGAGAA CAGCCTTCCGGCACGCGCCCGCCCGTCGTCGCGCGGGTGGGCGCATGCTCCCGGCGCTCG CCGGTATCGCCGCGGGCATCGCACTGTGTCTCGCATTCGCTCCCCTGTTCATTCAGGTGT GCCTGAGCATCTGGGGGTGATCGGGTGTCTGAGCCTGTGCTGATCGCGGTTCTGACGCTG TCGGGTGTGGCGCTGACCGCGCTCGGGGCTGTGCTCGGTCACCTGCTGTCGTCGCGCACG CAGAAGCGTGCCGCATCCATCCAGGCCGAGGCGAACAAGTCGACGGCCGATAACGCGCTG ATCGATCAGTTGCAGGAGGAGCTCGGCCGGTATCGCGACGCGACCGACAAGCGACTCGAT CGCCTCGAGACGGAGAACCGCGGCTACCGCGCGTTCCTCGGCGTGCAGCGCGACCACATG GCGGCGCACGGTGTGCCGCTCCCGGAGTGGCCTGACGGCCTGCCCCGGTAACGATTCGAG AGGGGACATCATGCGAGACTTCTTCGCCCGTCTGGCGGGCTGGTTCACTGAGACGCGACG GGCCGCGATTCAGGCGTTCGTCGCGTCGATCATCACTGTGCTGGTGATGCTGGGGGCGAC GACCGCGGATCAGGGTACGGCGTTGGCGGCGCTCGTCGCATCGCTACTGCTCGCCGCGCA GGGCCTGATCGGCCTCGCGCTGCTGCGTCCGTCCGACTGGTACACGTGGCTCAATGAGAC GGGCCGAGGTGTGGTGTACGCGCTAGGCCTGGCGATCGGTGGCGCGGGTGTCGCGTTCAA CTTGTTCACCCCGGAGACATCGGGCGTCATCGTGCAGGTTGCTACCGCCGTCGCGTCGAT CCTGGTCGCCGCTGTGCAGATGATGAACGTCGGCACGATCGCAGACGCTGGCTCGTCGAT CGTTCCTGCTCAGGCCGATCGTCATGCGGTGCTCGCGTCCGTCGCCGAGAAATACGGCTA CGTGATCGCGCCAAAGCTCGCCGACGCCGATGCGGCCACGCTGTCAGCGGATCTCGCCGT GCGCGGCTGGGCGGTCGGTGTGTACGCGCCAGAGGTCGCACCGCTCGAGTCGCTGCGACC GATCACTGACCTGAATATCGGCCGCGTCGACATCCTTGATGTCTTCGCGGATCTGCTGTC ATTCCGCGGCACACGATTCGACCTAATTCTGTCGACCGTGCCGCTCACGCGCGAGATCCT CGACGCGCTCGGCCCGTACACGGTCACGTCGGAGTACCCGGGGGACCGGGTTCGCTTCAT CGGGGCGACGTCGTGAGCCCGCTCGAGATCCGGAAGCTCGCGCTGGCTATGGCGATCGAG ACCCCGCACAATGAGCGGGGGAACACGACGTACGTCGAGGCAGCGAAAGAGTTCGAGAGG TACCTGCGGGGCGACGAGGCGATATCGGCCCACCGCGAGGCGACTCCGGGCCGCGTCGTG CTCTACACGCTGACGGCGCAGGATGCTGCGGCGATCGGGGAGCTCGACCCGCACACGAAT CAGCATCGCGTGGGCGACGTGCTCCCGATGCTGATCGTCCGCGTCTGGTCGGTCGGCGTG AACGGTCAGGTGTTCCTCGATGGTCCGCGCACCCTGTGGGTGACGTCGCGTCCTGAGGGC GACGGTCCGGGTACGTGGGCCTGGCCGGGCCGGGTCTGAGCGCGGCGCTCGCGGGCGCTG TCACGTTCGCTGTGATCCCGGACACACCGCGCATCGTGCCGTCCCCTGTCGCGGTGAGTG TGCAGCAGCCCGAGGTCGCGGTGTCTCGCGTTGAGCGGATGAGTCGAGATCGCTACTGAC TGCGGGCGGCTTTGAGGCGTTGCTTGGCATCTCGTTCGATGAGGACGGGTATGAAGTCGC GGACCTTGGATTCGCTGAATGACGCTCGTGCGGCCTCGACTGCGTCGGCCACGCTCTGAG GCGAGGCGTCGGGGAACCGCTCGCGCAGGCGTTCGGTTATCTCGACGATCGCTTTCGCCT CATCGGCGACCTTGTCTTCTGACATGGTGTTCCCCTTCGCACAGTCGGGTTAGTGCGCGC AGACTCTACTCTCTCAGGGTGAACGGCCTGTCGAGGGGCTGAAATTCGAACGGGGGCCGG GGTGCCTCATCATGCCGAGAAGCTGAGCCCGGGTGAGTACGCGCGTCTGTTGGCGATCGT GTGCCCGCCCGAGTCGGTGTGTTGGCTGTGCCGTGGCACCCTCGGCCCGATCCGCCATGA TCTCGGTGGCAGGCATCGGCTCGGCCCGTCCCTCGACCACGTGGTGCCAGCTTCGAAGGG TGGCACGTGGGACCTGTCCAATCTTCGGCCTGCTCACCAATGCTGCAACTCGGCCCGCCG CGATCGACCGCCGTCCATCCCGCGCGGCGTCCGCTCGTCGAGGTGGGCGAACGCGGGTCG ACGTGGCACCTGACCGCCCGGGCGGGATCAACACATTTTTTGCGGGCCCCCCACCCCTCT TCACCCGCGGGTCACCAAAATATCTCTCTCCCCGGTTCGTTCGTTCGATGTAGGGCCGTG TAGGGCGCACGTGCCGCGCTGGCGGTAGATACGGGTGTCGGCCGCGCCGTGGCACGTGGT CGATTCCTGACCGCTCAGAGAGGCGGAGAGCGGAGGGCGCGTGTCCGACAAGAAGCCGCT CCCGCCGCACGGTACTCGTGCGAGATACCGCGCTAAATGCGGGTGCGACAAGTGCCGGAA GTGGAAGGCCGATGACACCGCGAAGTATCGAGCAGCGAAAGCTAAGCGGGAGGGGAGGGC GCCCGCTGTCGAGCCCCCGGAGCGGGCGCGCCCTACATCCCCTCCGCGCCCTACAGATTC TAGAGCGACCACGGCGCGCCGACCAGATGCCGGCGATGCTCTTGCGCAGCTGATCGAGGA GGCGCTGTGGGCGGCGAGGGGCGACGCTGCGACCGCATCGGTGCTCGCCGCGGGTTGGAT TCGCGACGCGGGGTATCGGGTCGTTGTCGACGGGCCGGTCGAGTCGGCAGTGCGGGCGCA GCTGGGGGAGCCGAACGGAGACGCGGAGGCGACGCGGTTCGCGATGGTGTTCACCGCCGC CCGCATCCTCGACGACCCGAACACCAACGCTCGCAGCATCAAGCCGGCGATCGAGGCTAT GCGATTCGCGCTCGCTGACGCTGAGGGAGACGGGGGCGCCAACGATGCCGCCGCAGTCAT GGACGCGATCCGGGATGCCGCCCGGGGTGGAGACGGTTCCGCGGTGGGCAACGCCGCGTA ACCCTGCACGAGAGACGCGCGGGGCTGAGGTCGTCGGAGTTATGCGCGTGCTCGGTCAGG AGCCGATGCCGTGGCAGCGGGAGATTCTCGACACGGCGTTCGAGGTCGATTCGTTCGGGC TGCTCTGGTACCGCGAGATTGTCATCATCATCCCGAGGCAGTCGGGTAAGACGACGATCA TCATCCCGTGGGGTGTGCATCGGGCGCTCATGTGGCCCGAGCGGCAGTACATCTTGTATA TCGCGCAGACATACGCGAAGGCGCTCGAGAAGCTGCAAGAGGAGCAGCACTACCGGATCA AGCGATCGCCGATCGGGAAGCTGTTGCAGCCGTCCCGCAGTGGGACGACGCTCCGGGCGA CGAACGGCAATCATCACATGCTGTTCAGGAACGGGTCGAAGTGGTCGATTGACGCGGCGA CCGAATCGGCTGGGCATGGTTCGACGCTCGGGCTCGGCATCGGTGACGAGTTGTTCGCTC AGAAGGATGACCGGCTCGAGCAGGCGATCTCACCCGCGATGATCGCGGTACCCGACGCGC AACGACTGTGGATCTCGACGGCCGGGTACTCCGCGCGGAAGTCGCCGTTCCTGTTCAACA AACGGGAGCAGGGCCACGCCCGCACCGAGCTACTCCGCGCCGACCCTCGGCTGCTGAACG ACGGCCGGTATCGGTCGCTGTTCATCGAATACTCGGCCCCCCTTGACGCCGACCCGGACG ACCCGATGACGTACTGGGGTTGCATGCCTGCGCTCGGGTTCACGCAGACAATCGCGAACG TCATCTCGGAGCGCGAGAACCTGAAAGACGGATTCTTCCGCCCGTATCTGAACTGGTGGT CTGACGATCTGTCGGTCGAGTGGAAGATCCCGAAGGCCCGGTGGGAGGCGGTCGCCGATC CAGATTCGGCGGCGACGCGGCCCGAGGTCGTGTACGTGATCGACATTTCACCCGACTCGG CGTGGGCATCGATCGGTGTTGCCGCCGCTCGCGACGACGGCGCGATTCATCTCGAGGTGC TCGCCGACGCGCCGCGCGTCATCGACTATGACGACCCCGAGGGCGACTGGATTATCGACG GGCACGCGGGCGCCGACCTTCCCGGCATCCTCGCTCTCGTCAAAGAGGCTGACGGCCCCG TGTACGTCGAGCTCAAGACGGCCGGGTTCCTGATTCCGAAGCTGCGAGAGCACGGCATCG ACGCGCGGCTTATGGCGGATACCGACATAGCTGCGGCCGGTCCTGGCCTGCTCGACGCGG TCGTGACCCGTGCGGTACGGCACACCGGGCAGGACGAGATCACCGACGCGCTGAAAGAGG CCGCGGTGCAGAAGTTCGGCGACGGGTGGCGGTGGACCCGAAGCAAGTCAATGCGCCCTA TCTCGGCGCTGGTCACGGTGACATACGCGCGGCAGATGCTCGCGACGTTGTTCCCGGATC TCGCATACGACCCGGTCGCCGCGTTCCGCAACGCGAACGGAATCAAGAAGGAGGCGTCAT GACCGAACGTAGGAAGCCGCTCGAGGTGGTCGCGGCGGCTTTCGTGGCCGTCGTCGCGTT CCTCGCCGCCGAGTGGCAGGACGTGCTCGAGGTCGTGGGGATGTTGCTGATAGTGGTGGG CATCGGCCTGTGGTCGCTGTCGGCCGGTCTGATCGCCGCGGGCCTGGCGCTTCTGCTGGT CGTGTACCCGGCGATCCCTCGGCGGTGGCGGCGATGAGCGTGTTTTCGCGCCCCGAGACT CGCGATCTGTCGGCCGAGGATGTGTGGGGGCCGTCGTGGCAATCGCTCGGGCGTGGTGCT GCGCGCCGGCAGGCGGCGGCGTACGCGGCGATTCGGTATATCGCGGATCAATGGGCGCAG TCGACGGTCACAGTGACCGAGACGCGCAAGGGGGAGCGCGAGCCGGTGGCGACACCGCTC ATCCTCTCTGACCCGTCCCCGACGATGAGCCGCTGGGATTCGAAAATCCAGATGGTGACC GAGCTCAAGTCGCGCGGGAACGCCTACGCCGTGGTCGACTCCGCACGTCGGTACTGCCAG TGGATCCCGAAAGACTTCGTGACAGTCGACGACTCGAATCCGTTGCTCCCGATCTATCGG CTGCTCGGGCGCGAGGTGACGCTGGTAAAGCAGGGCGGGATCCTGCTGCACGTGCGGGAG CAGACGCGCGCCGGTTCAGTCGAGGGGCTGTCGCCGATCGAGGAATTCGCGGCGTCGTTC GAGTGGGCGGATCTCGCCCGGCAGTACGGGCGCCGATGGTTCAAACAGTCGGCGATGCCG CCCGCCATTCTCCAAGCCAAGGGGGCGAAGGGCGGGCAGAACCTCGCTGAGGCCCGCGAC GACTTCATTCGTGCGGCGAGCGAGGGTAAGCCGGTCGCTCTCCCGGGCGAGTGGGACTAC AAGCCGATCATGATCCCGCCCGAGCAGGCGCAGTTCCTGCAGACGATCGAGGCGTCGGCG ACCGAGATCGCGATCATCTACGGGGTGCCGCCCGAAAAGGTCGGCGGTAAGTCGGGGTCA TCGCGCACGTACTCGAATCTCGAGATGGATCAGAGGTCGTTCCGGATCGAGACGCTCGGC GGGATCTCGGGGCGCGCAGAGGCCGCGCAGACAGACATCCTCAAGCCCGACCAGGAAGTG ACGTACGACCTATCGCGTCTCGAGCGGCCGTCGCTGCTCGAGTTCATGCGCGCATATACG GAGCAGCTACGAAACGGCACGATCACGCTGCCCGAAGCACGCCGCGATCTCGGTCGGCGA GGGCTCACGACTGACGAGATCGACGACTGGCAGAAGCACTACGCGACGACCAAGAGCGAG TCGGAATCGCTCGCTCAGTCGATCTCGACATCCATCACAGAGGGGGCATGACCATGTCAG GAGCAGTTATCGAACGGCGCGTCATCGACCGGCCGGTCGAGTTCCGCGCCGCGCCGGAAG GCTCGTCGAGCCCTGGGATTTTGGGCGGCTACGCAGCCGTGTTCGATCAGATCTCGCGGG ATCTCGGCGGGTGGTTCGAGGAGATCGCGCCTGGCGCGTTCGGCGCGCCGATCGAAGGCG GCGCGCTCGACCTGAAACTGCACACGCGGGTGATCGCTCGCGCTGAGCACGACAGCCGAC TGCTGCTCGGTACGACGAACGCGGGAACACTGCGGCTGTTCATCGACGACATCGGTCTGC GGTTCGAGATCGATTTGCCGAACACGAACGCCGGCCGCGACGTCGCCGAGCTCGCTGAGC GCGGCGATTACGTATTCGCATCGTTCGCGTTCTCGGCGCTCGAGGCGGACTACCGCGAGG ACGCAGACGGCCGGTTCATCCGCACGGTGCTGCGCGCAACGCTCCACGACGTCGCGCCCG TCGCCGATCCGGCCTACTGGGGCGCGTCCGCGCAGATGCAGCGCGCGTTCGATCTCGAGG CCGCGCGCGCATCCCTTTCCCCCGCACCGGCTGAGCCCGGTGAGCGGGAAGCCACGGTCC GATCGGCCGCGGCAACCATGACTCGCGAGACGCATCCCGCGCTCGTGAACCGACCCCGCA AGCGCGGGATCTGAGAAAGGAGATCCGGATGACCAGCATCCAGGAACGAATCAAGTCCCT CGCCGAGGAGCAGAAGCGGGCGTGGGAGACGGAGGGTAAGCCGCTCGCCGACATCGCCGC CGAGCGCGCGCTGACCGGTGAGGAGCACGAGAAGTTCGAGCGTCTGACGCGCGACTTCGA CAGCTTCGACGACCGGATCACGCTGCTCGTGCAGCAGCGTGATCTCGAGCAGCGGGCGAT GCAGTTCGCGGGCGAGCTGCTCGGGAACCGTTCGGCGTTCGGCCCCGCGGCCGATCTCGC CGACTTCGCGCAGAACATCCGCAAGATCCTCGGCGGCGAGGAGCGGGGCCTCGAGTACGT CCCGACGCCTGAGGAGGTGCGCTCGTTCTCGGAGTCCCGGGCGCTCTCCGTGGGCACCGC GTCGGCGGGTGGGAACGCGGTGGGGGCATCGTTCCTCGCGCGGCTCATCGAGCCCCTGCG GCAGTTCTCCGGGATCTACGCGGCGGGTGCTTACGTGTTCGTCACGGAGAAGGGTGAGTC GGTCACGCTCCCGCGTCTCACGTCGTTCGGTGCCGCGGCGGCGGCGACCGAGGGAACGCA GATCGGTGGCACCGACCCGACCTTCGGGCAGATCGCGTTCGGCACCAAGAAGTACGGCGA GTACGTCGGGATCTCGAACGAGCTCATTCTGGATGCGCTGTTCGACATCGAGGGTTTCGC GACCCGGCTCGTCGGCGAGAACATCGCCGTCCTGCTCGGTCAGGATCTCGTGACCGGAAC GGGAACGGCGCAGCCCGCGGGTATCGCGACGGTCACGACTCTCGGTGTGACCGGTGGGGC CGGGGTCGCGGGTGCGCCGTCGTGGGACAACCTGATTGACCTTCAGGAATCGGTGCTCGC GCCGTACCAGGCGAACGCGGCTTGGGTTGCGTCCAACTCCGCGGTTGCGGGTATCCGCAA GCTGAAGGACGGCTCGGGTCGCTACCTGTGGGAGCCGAACGGTCAGACCGGAGCGCCCGC GCAGCTGCTCGGCGCGCCCGTGTTCCGCGACCCGTTCGTCGCGTCGACCGGGCTCGGTGC GAAGTCGATGTTCTACGGCGACTTCTCCCGCTACTGGGTGCGCGTCGTCGGTGGCGTGCG TGTCGAGCGTTCCGACCAGGCACTGTTCGGCTCGGACCAGACCGCGTTCCGTGGTGTGCT CCGCGCGGATGGTCGTCTCATGGACCCGTCGGCGGTCAAGCACTTCATCGGGAACGCGGC ATGACCCCCGCGAAGGTGGCGGATGCCGCCGCGCTCGAGGCCGAGGCGAAGGCCGCGGCC GAGGCGTCGGCCGCGTCGGATGCCGCCGCAGCCGAGGTCGAGGCGGTCGAGCCCGAGGGC GTGACTGTCGTGATGGTCATCGGCATCTCGGGCCTGCGCGACGGTGAGCCGTGGCCCGCG CCCGGCGAGTCGATCGTGCTGCCCGCCGACGAGGCCGCGCTGTACATCGCGAACGGGTAC GCGAAGCTGCCCGCCGACGAGAAGTAGCAACGGATTCGCCGAGAGGGGCCGCACCTATTC GGGTGGTGGCCCCTCTCGGCGTTTCAAGGAGGGGGATCGCATGGCATCGAATTGGCCGTT GGGCGCTGCGGATCTGCGGAAGGCGCTCGACTATCAGGTCGGGCAGGATGATGCCGGCGA GCTCACGCTGTACATGTCGGCCGCGTGCGAACGCATCGACAAGAAGACGGGGCGTCGCTC TGAGCCGACCCGACACGAGGTCGACGGGAAAGTTCCCGTCGTTTTCCTGCTCGCGGCGCG CAAGCTCGCGAAACTGTGGTGGACCCAGGACAAGCGGACGAACCGCACCGGTCGTCAGAC TGGTGACGAGATCGATCCGAGCGAGGGTGTCGGCGGTGTGGATCTCCCGCGCGTGGTCGC TGGGATGCTCGCTGACTACCCTGATCGGCTCTACCCGGTTGAGACGCCGTGAGCACGATC AGCGCGTCGACCGCGGCATACACGGCCCGGGCGGGGTTGCTCGCCGCTGTGCGGGCCGCG CTCGCCGACGAGACGAAGGTCGACATCGACGCCGGGTTCCTCGGTCAGCCGGGGCATAAC GACTGGGTCGCGATGGGCGAAACGATCGGGGTCGACGTCGACCCGAAGACGGTCGGCCCG CGACGGCAGCGTGACGAGACGATAACGCTCACATTGAACGTCGGCGCATTCAAGCCGGGG CACACCGAGGCCGCCGTCGTCGCCGCATTCACGCGGGCTGACGACCTGTTGCGCCTCATC TCGACGTACGTGTCGGCAGGCGAGAACACGGAACTGGGCGGCGTCGTCGCATGGTGCCTG CCGGGGTCTGCCGACTGGGTGGGCGCCGAGATCGACGGCGGCTTTCAGGTGGAGATCGCC GCGACATTCATCTGCGCGCATCGCGTGCGGGCCGCATAGAGAAGGGGACAAAGGGGATAT GGCGAAGTTCAAGAATGTGAGCCCGCTCGGCGCGCTCGACATCGACGTGCTGGGTCTGAG GGGCGTCAAGTCCGGCGAGGAGTTCGAGGTGCCTGACGAACTGGCGAGCATGTTCGTCGG GCAGGTCGGCACGTTCGAGGGTGTCGAGGTACCCCCCGCCGTGGTGGCCGAGTGGGACGC GTACATGTCGGATGGCGAGGCCGTCGAACCGGTCGCGATCGCCGAGCCGGATCAGTCGAA GACGCGCAAGAAGGGAGCGGGCGAATGACGCAGCAGCTTGATTTCTCGGTGGGCATGGGC AAAGAGACGACGTACGGGAGCCCCTCCGCGGTTACTCGATTCTTCGAGTCTGAGGCCAAA GCAAAGTACGACGTCAAGACCATCAAAGGCTCGGGGCTGCGGCCCACGAAGGGTGTCGCC CGGACGTCGCGGCAGTCGATCTCCGGATTCGAGGGGTCGACCGACATCGAGCTCGATGCT CCGACGCGCGGGCTCGGGTTCCTGCTGAACGCCGTGATGGGAGCCGTCACTAACACGCTC GTTTCGACCGGGCTGTACCAGCAGGTGCACACCCTTTCGACGACTGACCCTGTCGCGTCG TACGCGATCCAGGAAGCGCTACCGCCGATCGGGGGCGGGGCTTCGAACGTGCACACGTTC CGGGGATGCGTGTTCGATTCGCTCGAGATCAGCGCGAAAGAGGGCGCGTACCTTTCGGTG AAGCTGTCGGCAACGATCCTCAAGATGCTGACGACGGGTGCGACGGCGGCGTCGTACCCG TCTGACGACACCCTGTTCTCGTTCGTGCACGGCTCGATCCAGGTTGGCGGGTCGCTCACG GAGCCGGGGGCGACGACACTCGCCGTGGGCGACGCGATCCCCGCCGTGAACATCTCCGAC TTCTCCTTGAAGGTGGCACGCAACCTCGACAAGAAGGGATGGAACCTCGGCGGTGCAGGG CTGCGCTCGCGCCCACCCGTGCTCGGCAAGCCCGAGATCACGGGAAAGATCACCGCTGAG TACACCGACAATGTGCTGCGTGATGCGTACCTCGCTCAGACGCCGCTCGTTCTCATCCTG ACATTCACGAGCGGGTCGAACGTGCTTCAGATCGCGATGCCAGCGATCAAGCTCAAGGGC GAGGTGCCGACGTCGAACGGTGGTGACGTGATCACGCAGTCGATCGACTTCGAGGCGTTC GACAACGGCACCGCGTCGCAGCCGATCTTCATCGTGTACCGCACTGCGGACACGACGCCG TAGGCGGGTCGGGTCGTGCAGCACAGGGTGACGGCGGATCTCGCCGTAGATCAGGACAAG CTGCGGAAACGGCTCGACGCAGTCAAGGAGTTCAGCCCGGCGCTCATGCGCGGGACGCGA AAGCTGCTGCGCACCACTGGCGACGAGGTAATCGCCGAACAGTCGGCGATCCTCGACGGG CCGTTGCCCCGCGGCATCCGGGCCGCGGGGAAACGAGTCGTGATCCGACGCAACAAGAAG ACGGGCAAGCTCGGGCTTCGCACCCTGAACGCATATCGCGAGCAGGATGTGCGCTCGAGC GGCCGGTCGACCGGGCTGCGTAAGGGAATCAAGGCCGGGCTGCGCACGCGCGTCGTGCTC GGCAAGACCCGCACCGAGGTTCGCGTGCAGACGACCGGCGCCCGTGAGAACGGGTCCGCG TTCTGGCAGTCCAAGAAGTTCCGGCACCGCGTGTTCGGCCGCGACGAGTTCGTGTACCAG CAGGGACAGCCGTACTTCTGGGGACCGGCGTACCGCGGTGCGGCCGGGATGGTGCGGCGC ATCGACGACATCGCAGACCAGGCATTCAAGCAGATCCCGCTCGAGTGAGCGGCCCACAAT CACAGAGAGGGGGAGTCATGGCGACTCTCAAAGTCGGCGGTCGCGAACTGGTCGCAAAGC CGCTCAGCAAGGCGCGGGTGTCCGACATCATCGAGCTTCAGCGGCAGTCGGGCATCAAAG AGATCTCGAGCATCCGGGAAGCGGTCGAAGAGGCTGACATTCTCGGCAACGTAATCTTGT CATTCCTCACGCAGCACAACGCGGGATTTCGCGTGAAGTGGGATGACCTGATTGACGGGC CGCTCGAGGATCTCGGGGAGTACCTGCCCGACCCGGAACCCGAGGGCGAGGGTAAGGAAG ACGCAAACCCTCCGCAGGCCGAAACGGCCGCGGACGACGCGGCCGACGTGGAGGCGTCGA CCCCCGAGTAGGTCGGCTCGAGGCGACCGAGGGCAGCGTCGCCGAGCAGGTTCGGAATCG CATCCTCACGATCAGTCACGCGCAGTACTGGCCGGGGATAACGCCTTTCAACGTGGGCGA TCTGCCCTACGACTTGTGGGTGTCGTACGCACTTTCGTGCGACGAGCAGATCGCACGAGA GAAGGAATACGCGGACGAGGTCCGCCGAGCTAGGAGGTAAGACGTGGCCGGTTCGGCGAA GGATTTCATTCTCAATCTGGTAGTCGACAACTCCGACGCCGACAAGGGCTGGGACAGCTT CGAGAAGTCCGCGAAGGGCGCTGCGTCGGCCGTGGCGGCGGCGTGGGGTGCGGCGGGTGT CGCTGACGTCATCGGCGGCGCTCTCGACTCGGGCGCGTCCAACGCGAAGGTGTCGGCGAG CCTCGGTCTGACCGCCGAGGAATCGGCCCGCATGGGCAAGGTGTCGGGGGATCTGTTCGC GCAGAACTACGGCGAGGCGTCGGACATCTCCGAGGCGGTCGAGTCCGTGGTGAGCTCGAT CGGCGGAATGCGGAACGCAAGCGCCCCAGATATCCAGGCGATGACGGCCGACGTCATCAA CTTCTCGAAGGCGTTCGAGCAGGACGTGGGTCGATCGGCTCAGATCGCCGGGCAGATGGT GACGCAGGGCCTCGCGGTCGACGCTGGGCAGGCGCTCGATCTGCTCACCCTGTCGATGCA GAAAGTGCCGAAGGAACTGCGCGGGGATCTCCTCGACGCAGTCGACGAATACGGCGGCAT GTTCAATCAGATGGGCATCAGCGGCGAGCAGTCGATGTCGATGCTGGTCGCCGCGTCGCA GAAAGGCATGTACGGGATCGACAAGACCGGCGACGCGATCAAGGAGTTCGCGATCCGGGC GACCGATATGTCGTCCGCGACGCAGGGCGTGTACGACATGCTGGGTCTCAATTCGCAGGA GTACGCGAACATGCTGCTGGCGGGCGGCGAGGTATCGGCCGACGCGTTCAATACGATCGT GCTCGGCCTCGAGCGGATCGACGACCCGGCTACCCGGGCGAACGCCGCAATCACCCTCTT TGGGACACCGCTCGAGGATCTCGGGGTCGACGGAATCCCGAAGTTCCTCGGTTCGCTGCA TGGCGTCACGGGCGGGCTCGGCGATGTCGACGGCGCAACGAAGGCTATGGGCGACACCCT CAACGACACGGCGCAGAACCGAATCGACACCATGAAACGCGGCGTCGAGGGTTGGATGCG CTCAATGGTCGAGGCGGGTGGGCCTCTCGGCGAGCTCACGGCCGGAGCAATGGCGTTCGG CCCCGGCATCGCGCAGGCCGGGTCACTGCTCGCGGGCGTCACGGGACTGCTGTCGCTGTT CCGCGGTGCGACGATCTTCGGCACCGCGGCGACGATCGCGAACACGGCTGCGCAGACCGC GAACAATGTCGCGTGGCTTGCCTCCCCGGTGACATGGATCATCATCGCGATCATCGCCGC GATCGGTCTGCTCGTGGCCGCGGGGATCTGGCTGTGGCAGAACTGGGACGGCGTCACGAA GTGGATCGGTGAGGCGTGGTCAAACCTGATGGGTGCCTTCGAGAACGGCGGGCGTCAGAT CTCGGACTTCTTCGGCGGGATCCCCGACGCGATCGGGTCAGCGTTCGAGTTCGCCGGAAA CGGCATCATGCAGATCGGTCACGGGGTCGCGACCGCGTTCGCGTGGCTGTGGAACAACAC GGTTGGCGCGATCAACTTCGAGGTTCCCGGGTGGGTGCCGTTCATCGGAGGGCAGCGGGT CAGCTTTCCACAGATCGTCGTTCCCGCGCTCGCGGCGGGTGGGATCGCGCTCGGCCCGAC GCTGGCCCTGATCGGTGAGGCTGGTCCCGAGGCAGTCGTACCGCTGTCGCGGGCTGGCGA TTACGGGCTGGGTGGAGGCGGTGACGTCGTCGTGCCGGTGAATTTCTCGATCGACGGGCG GACCATTCTCGAGGCGGTCATTCGCGCGGCTCGCAAGCGGAGGTAGCAATGCAGACGGCA CCGGTTGGATTCGATGCGGCGATCGCGGCACGTTCGATCGACACGCTCACGGTGGAGGCT GCCGCGGCGACGTCGGGTGTCGACGTCGCCGCGGCGACCGGTTGGGGTGAGCGGATCACG GTTGACCGGCAGATGTCGGGCGAGCTCCCCGAGGAGGCGTCCGATGTTGTCGGGAGTGTG TCGACGACGCTCACGATCGAGGGTGACGCGTACGCGCCCGGTGCGCCGTCGCCGATGCGA GATGCCGAGGCATGGCTCAATTCCGCGTCGAGCGTGAAGGCCGGGTACGGCGGGATCAAG GTTCCCGTGTTCACGGGGCGTGTCGCCGATCTCGATGCGTCGGAAGGATCAGGTGCGCTG ACGCTGACTGCGCGGGACTCGAGCGAACGCCTGACCGCTCCCGTTCTGTTACGCCCGTAT GGAAGCTACGGGCGTCGATCGGCGACTGGCGCAGCGTTCCGGCATCCGACGAACACGCAG GCTGTCGTGACATCGATCCTGCACACGAACGGTATCCGGATGACGCCGGCACCGCGCGCC GGGTGTGAACTGTCCGTGCCCGGGGTGGGCGGCTGGCTCGCGGATGTCGGATGGACGGCC CCTCTCGGCCAGTCGAACGTGACGTCGCCGTGGCTCGTCCCTGGTCGATTCGGGTCGATG CCGGATTCGTCAGCCGAGATCATCCGCGGGTACTTCGCGACTCGACGTGCGTTCTCCGGA TCCGTGACGATGGTCGAGGCTTTCGTGCTGTTCGCCTCTGGCATGTCGCAGGAGCTTCTG AGGATCCAGTCCTACGTGGGTGCAGCCGTGACGCTCGAGGTCGCGTCGGGTTCCCTGAGC GTCGTGTGGCGCCCGGATCCCTCGACGTCTTCCGTTGTCGCGTCCGCATCGATCGCGAAC GGGTGGCATCACGTCGCCTTCGAGGTCGTTCCCCGCGCCTATGTGCAGGTGTGGGTCGAC GGGGTATCGGTCCTGTCGACGACGTCAGTGTGGGCGGGCGCGCTCCCGACGACCGACATC GACTGTGTGATCTGGTCGCCGGGTGCGATGCAGGGTGTCGCCGCGCACTGGAACGCGGGC GCGTACAACGCGGTGCCGACGCCGTCGATTATGACGTTCACGCCGGATGCTGATCTATCG ACTGGTGCTCTCGATCTCATGAGCATCCCCGATGTTGACGGGCGCGCATCGTGGGAGGTG TTGCAGGAGATCGCTCAGGCCGAGCTCGGCATGGTCGGGTTCTCAGAGGCGGGTCGATTC TTCTTCAAGTCGCGGGCGGATCTCGCGGCGAACACGTCGCCTGTCGCGACGTGGGGCATC GACCTGATCGACGACATTCACGCATCGGTGTCGATGGACAGCGTCTTTACTCGGGCGACA GCGAAGGTGAAACGGGTCGTCGGTGTCGACTCGGGTCGTGGCACGGTCGATGTCGTGCCG TCGCTGATCGCGGATTCGGTGCTCTCGGTCCCGGTCGGCACGTCGTCGGTGATCGTGTCG GCATCGCAGCCGAACGTGGTCGACGGGCAGCAGGTGGCGATCATCACGGCGACCGGGGCG GCGCTGAATGTGCCGGTCGGGATGGTGCTCTGTTACGGCGAGAACGGCCTGTCTCGGTAC ACGGGCGGGCAGGTGACGGCGTGGATCACCAACGTGGGTATCAAGTCGTGGCGAGTCACG TTCCGCAACGACAGCGCCTTCCAGCTTTACGCCGCGTGGCCCGCTGATTTCGTATCGGCA GGGACGCAGTTCGGACTCAAGGCAGGGGATCCGGGGTTCTGGATCAACGGGTACACCTAC GACCCGTCGAACGCGCTTGACGAGGTCGTGGACCGGTCGAACGCGGGCGGAGTGGGGTCG TGGGGGATCCGGTTGCACCAATTCTCCGACAGCGTTTGGAGGCAGGATGCCGTGCCTGCG CGGGCGTTCCTCGACGCGATGCTCGCCGACACGGCGCAGCCCCGCGCGCAGATCGCCGAT GTGACCGTGCCCGCGGATCCGCGGTGGCAGATCGGCGACCCTGTGCGGGTGACGGATTGG CGGGGCCGCGTGCCCGGGTTCGTGGCGCGTATCACCGCGATCAAGCTCACGATTGACCGG GCCGTCGAGAACGGAATGACCGGGGTCTATGGGCTGCGGCAGATCCCGGGAGCAATACCG CGCGTCACGTCGGGGCCGGCCGACCGTTCGGTGTCGGCCGGGTCGACCGCGGCTTTCACG GTGGCGGCGACCGGCGCGGCGGGGTACCGGTGGCAGGTGCTCGTGCCGGGCGGATCTGGG TGGGTCGATATCGCGGGTGCGACGTCGGCGACGTACACGACCCCCGCAACCGTGCCCGCA GACTCGGGCAAGCAATACCGGTGCAACGTGACGAACGCGACCGGCGACGACTGGACCGGC GCGGCGACGCTCACGGTCACATGA
Region Details
| Region | 1 |
| Region Length | 16.9Kb |
| Completeness(score) | incomplete(50) |
| Specific Keyword | terminase,portal,head,tail |
| Region Position | 32076-49019 |
| # tRNA | 0 |
| # Total Proteins | 21 |
| # Phage Hit Proteins | 11 |
| # Hypothetical Proteins | 9 |
| Phage + Hypothetical Protein % | 95.2% |
| # Bacterial Proteins | 1 |
| Attachment Site | no |
| # Phage Species | 9 |
| Most Common Phage Name(hit genes count) | PHAGE_Strept_phiBT1_NC_004664(3) PHAGE_Strept_TG1_NC_018853(3) PHAGE_Strept_phiC31_NC_001978(3) PHAGE_Rhizob_16_3_NC_011103(2) PHAGE_Gordon_Gustav_NC_042088(2) PHAGE_Mycoba_Littlee_NC_042322(1) PHAGE_Mycoba_Bongo_NC_041970(1) PHAGE_Strept_NootNoot_NC_042009(1) PHAGE_Escher_vB_EcoM_Alf5_NC_031082(1) PHAGE_Entero_SfV_NC_003444(1) PHAGE_Arthro_Kitkat_NC_031254(1) PHAGE_Strept_Jay2Jay_NC_029098(1) PHAGE_Mycoba_PegLeg_NC_021299(1) PHAGE_Escher_vB_EcoM_VpaE1_NC_027337(1) PHAGE_Mycoba_Baka_NC_042316(1) PHAGE_Gordon_Mahdia_NC_042089(1) PHAGE_Mycoba_Redno2_NC_022066(1) PHAGE_Mycoba_Omega_NC_004688(1) PHAGE_Microb_Eleri_NC_042109(1) PHAGE_Entero_IME_EFm1_NC_024356(1) PHAGE_Gordon_Attis_NC_041883(1) PHAGE_Gordon_McGonagall_NC_030912(1) PHAGE_Strept_Samisti12_NC_042012(1) PHAGE_Gordon_Sour_NC_042132(1) PHAGE_Prochl_P_HM1_NC_015280(1) PHAGE_Mycoba_Ariel_NC_028876(1) PHAGE_Strept_Peebs_NC_042011(1) PHAGE_Microb_Min1_NC_009603(1) PHAGE_Coryne_phi674_NC_042355(1) PHAGE_Strept_Paradiddles_NC_042010(1) PHAGE_Coryne_phi673_NC_042354(1) PHAGE_Gordon_SoilAssassin_NC_031251(1) |
| First Most Common Phage # | 3 |
| First Most Common Phage % | 14.28% |
| GC % | 66.64% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|VYSA01000001.1| Microbacterium rhizomatis strain JCM 30598 Scaffold1, whole genome 1811712, gc%: 68.50%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 21 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 32076..33092 | PHAGE_Microb_Eleri_NC_042109: hypothetical protein; F6B43_00205; phage(gi100023) | 2.09e-07 | Showinfo_outline |
| 2 | 33240..33566 | PHAGE_Microb_Min1_NC_009603: hypothetical protein; F6B43_00210; phage(gi149882842) | 2.77e-38 | Showinfo_outline |
| 3 | 33586..34371 | hypothetical protein; F6B43_00215 | 0.0 | Showinfo_outline |
| 4 | 34497..34754 | PHAGE_Gordon_Attis_NC_041883: hypothetical protein; F6B43_00220; phage(gi100019) | 2.38e-12 | Showinfo_outline |
| 5 | complement(34888..35100) | hypothetical protein; F6B43_00225 | 0.0 | Showinfo_outline |
| 6 | 35218..35508 | PHAGE_Strept_Jay2Jay_NC_029098: terminase associated HNH endonuclease; F6B43_00230; phage(gi985760306) | 2.64e-09 | Showinfo_outline |
| 7 | 36016..36336 | hypothetical protein; F6B43_00235 | 0.0 | Showinfo_outline |
| 8 | 36260..37837 | PHAGE_Mycoba_Bongo_NC_041970: hypothetical protein; F6B43_00240; phage(gi100014) | 6.91e-25 | Showinfo_outline |
| 9 | 37834..38052 | hypothetical protein; F6B43_00245 | 0.0 | Showinfo_outline |
| 10 | 38049..39206 | PHAGE_Mycoba_Ariel_NC_028876: portal protein; F6B43_00250; phage(gi971751162) | 4.32e-25 | Showinfo_outline |
| 11 | 39203..39889 | PHAGE_Strept_phiC31_NC_001978: gp35; F6B43_00255; phage(gi40807286) | 1.05e-23 | Showinfo_outline |
| 12 | 39904..41139 | PHAGE_Strept_phiC31_NC_001978: gp36; F6B43_00260; phage(gi9631145) | 4.58e-39 | Showinfo_outline |
| 13 | 41136..41402 | hypothetical protein; F6B43_00265 | 0.0 | Showinfo_outline |
| 14 | 41476..41847 | phage gp6-like head-tail connector protein; F6B43_00270 | 0.0 | Showinfo_outline |
| 15 | 41844..42314 | hypothetical protein; F6B43_00275 | 0.0 | Showinfo_outline |
| 16 | 42334..42603 | hypothetical protein; F6B43_00280 | 0.0 | Showinfo_outline |
| 17 | 42600..43598 | PHAGE_Strept_phiC31_NC_001978: gp39; F6B43_00285; phage(gi9631148) | 1.44e-14 | Showinfo_outline |
| 18 | 43623..44183 | hypothetical protein; F6B43_00290 | 0.0 | Showinfo_outline |
| 19 | 44213..44566 | hypothetical protein; F6B43_00295 | 0.0 | Showinfo_outline |
| 20 | 44779..46581 | PHAGE_Gordon_Sour_NC_042132: hypothetical protein; F6B43_00300; phage(gi100029) | 1.47e-67 | Showinfo_outline |
| 21 | 46584..49019 | PHAGE_Escher_vB_EcoM_VpaE1_NC_027337: putative tail protein; F6B43_00305; phage(gi849250081) | 2.58e-09 | Showinfo_outline |
Sequence
>32076..33092
MicrobacteriumrhizomatisMTDIKGGYQRPTASSYVSSSWEDHKDRPTPSTEPGTDYGVAYGTTLYAPEDFEVIGVDHSNDGPEGRRLSLLLGDGSPTSSIHLSEIWVSEGQRGKRGDAVGKTGASAWGSDWGVGAHVHQTLWENMPIRFGTWATIDFEARVGDDNDGATLFDQTVALEQAFLNAAQGESLVVDGIFVETLPDGSEGKTKAAIKRYQTYLKGRGWYDGEIDGYWGGQTQAGHEKRYPEWVAETTPAPNPSYHTATVADLAELEYVNGLQKIAHLYGYGANQAQESWMDNRWGGGSQSGLQAFLDQNHGGSLATWLRSRWGYSDNDDLWGPNMRAAAVRAEHENFLAL
Sequence
>33240..33566
MicrobacteriumrhizomatisMSEPVLIAVLTLSGVALTALGAVLGHLLSSRTQKRAASIQAEANKSTADNALIDQLQEELGRYRDATDKRLDRLETENRGYRAFLGVQRDHMAAHGVPLPEWPDGLPR
Sequence
>33586..34371
MicrobacteriumrhizomatisMRDFFARLAGWFTETRRAAIQAFVASIITVLVMLGATTADQGTALAALVASLLLAAQGLIGLALLRPSDWYTWLNETGRGVVYALGLAIGGAGVAFNLFTPETSGVIVQVATAVASILVAAVQMMNVGTIADAGSSIVPAQADRHAVLASVAEKYGYVIAPKLADADAATLSADLAVRGWAVGVYAPEVAPLESLRPITDLNIGRVDILDVFADLLSFRGTRFDLILSTVPLTREILDALGPYTVTSEYPGDRVRFIGATS
Sequence
>34497..34754
MicrobacteriumrhizomatisMSAHREATPGRVVLYTLTAQDAAAIGELDPHTNQHRVGDVLPMLIVRVWSVGVNGQVFLDGPRTLWVTSRPEGDGPGTWAWPGRV
Sequence
>complement(34888..35100)
MicrobacteriumrhizomatisMSEDKVADEAKAIVEITERLRERFPDASPQSVADAVEAARASFSESKVRDFIPVLIERDAKQRLKAARSQ
Sequence
>35218..35508
MicrobacteriumrhizomatisMSPGEYARLLAIVCPPESVCWLCRGTLGPIRHDLGGRHRLGPSLDHVVPASKGGTWDLSNLRPAHQCCNSARRDRPPSIPRGVRSSRWANAGRRGT
Sequence
>36016..36336
MicrobacteriumrhizomatisMLAAGWIRDAGYRVVVDGPVESAVRAQLGEPNGDAEATRFAMVFTAARILDDPNTNARSIKPAIEAMRFALADAEGDGGANDAAAVMDAIRDAARGGDGSAVGNAA
Sequence
>36260..37837
MicrobacteriumrhizomatisMPPQSWTRSGMPPGVETVPRWATPRNPARETRGAEVVGVMRVLGQEPMPWQREILDTAFEVDSFGLLWYREIVIIIPRQSGKTTIIIPWGVHRALMWPERQYILYIAQTYAKALEKLQEEQHYRIKRSPIGKLLQPSRSGTTLRATNGNHHMLFRNGSKWSIDAATESAGHGSTLGLGIGDELFAQKDDRLEQAISPAMIAVPDAQRLWISTAGYSARKSPFLFNKREQGHARTELLRADPRLLNDGRYRSLFIEYSAPLDADPDDPMTYWGCMPALGFTQTIANVISERENLKDGFFRPYLNWWSDDLSVEWKIPKARWEAVADPDSAATRPEVVYVIDISPDSAWASIGVAAARDDGAIHLEVLADAPRVIDYDDPEGDWIIDGHAGADLPGILALVKEADGPVYVELKTAGFLIPKLREHGIDARLMADTDIAAAGPGLLDAVVTRAVRHTGQDEITDALKEAAVQKFGDGWRWTRSKSMRPISALVTVTYARQMLATLFPDLAYDPVAAFRNANGIKKEAS
Sequence
>37834..38052
MicrobacteriumrhizomatisMTERRKPLEVVAAAFVAVVAFLAAEWQDVLEVVGMLLIVVGIGLWSLSAGLIAAGLALLLVVYPAIPRRWRR
Sequence
>38049..39206
MicrobacteriumrhizomatisMSVFSRPETRDLSAEDVWGPSWQSLGRGAARRQAAAYAAIRYIADQWAQSTVTVTETRKGEREPVATPLILSDPSPTMSRWDSKIQMVTELKSRGNAYAVVDSARRYCQWIPKDFVTVDDSNPLLPIYRLLGREVTLVKQGGILLHVREQTRAGSVEGLSPIEEFAASFEWADLARQYGRRWFKQSAMPPAILQAKGAKGGQNLAEARDDFIRAASEGKPVALPGEWDYKPIMIPPEQAQFLQTIEASATEIAIIYGVPPEKVGGKSGSSRTYSNLEMDQRSFRIETLGGISGRAEAAQTDILKPDQEVTYDLSRLERPSLLEFMRAYTEQLRNGTITLPEARRDLGRRGLTTDEIDDWQKHYATTKSESESLAQSISTSITEGA
Sequence
>39203..39889
MicrobacteriumrhizomatisMTMSGAVIERRVIDRPVEFRAAPEGSSSPGILGGYAAVFDQISRDLGGWFEEIAPGAFGAPIEGGALDLKLHTRVIARAEHDSRLLLGTTNAGTLRLFIDDIGLRFEIDLPNTNAGRDVAELAERGDYVFASFAFSALEADYREDADGRFIRTVLRATLHDVAPVADPAYWGASAQMQRAFDLEAARASLSPAPAEPGEREATVRSAAATMTRETHPALVNRPRKRGI
Sequence
>39904..41139
MicrobacteriumrhizomatisMTSIQERIKSLAEEQKRAWETEGKPLADIAAERALTGEEHEKFERLTRDFDSFDDRITLLVQQRDLEQRAMQFAGELLGNRSAFGPAADLADFAQNIRKILGGEERGLEYVPTPEEVRSFSESRALSVGTASAGGNAVGASFLARLIEPLRQFSGIYAAGAYVFVTEKGESVTLPRLTSFGAAAAATEGTQIGGTDPTFGQIAFGTKKYGEYVGISNELILDALFDIEGFATRLVGENIAVLLGQDLVTGTGTAQPAGIATVTTLGVTGGAGVAGAPSWDNLIDLQESVLAPYQANAAWVASNSAVAGIRKLKDGSGRYLWEPNGQTGAPAQLLGAPVFRDPFVASTGLGAKSMFYGDFSRYWVRVVGGVRVERSDQALFGSDQTAFRGVLRADGRLMDPSAVKHFIGNAA
Sequence
>41136..41402
MicrobacteriumrhizomatisMTPAKVADAAALEAEAKAAAEASAASDAAAAEVEAVEPEGVTVVMVIGISGLRDGEPWPAPGESIVLPADEAALYIANGYAKLPADEK
Sequence
>41476..41847
MicrobacteriumrhizomatisMASNWPLGAADLRKALDYQVGQDDAGELTLYMSAACERIDKKTGRRSEPTRHEVDGKVPVVFLLAARKLAKLWWTQDKRTNRTGRQTGDEIDPSEGVGGVDLPRVVAGMLADYPDRLYPVETP
Sequence
>41844..42314
MicrobacteriumrhizomatisMSTISASTAAYTARAGLLAAVRAALADETKVDIDAGFLGQPGHNDWVAMGETIGVDVDPKTVGPRRQRDETITLTLNVGAFKPGHTEAAVVAAFTRADDLLRLISTYVSAGENTELGGVVAWCLPGSADWVGAEIDGGFQVEIAATFICAHRVRAA
Sequence
>42334..42603
MicrobacteriumrhizomatisMAKFKNVSPLGALDIDVLGLRGVKSGEEFEVPDELASMFVGQVGTFEGVEVPPAVVAEWDAYMSDGEAVEPVAIAEPDQSKTRKKGAGE
Sequence
>42600..43598
MicrobacteriumrhizomatisMTQQLDFSVGMGKETTYGSPSAVTRFFESEAKAKYDVKTIKGSGLRPTKGVARTSRQSISGFEGSTDIELDAPTRGLGFLLNAVMGAVTNTLVSTGLYQQVHTLSTTDPVASYAIQEALPPIGGGASNVHTFRGCVFDSLEISAKEGAYLSVKLSATILKMLTTGATAASYPSDDTLFSFVHGSIQVGGSLTEPGATTLAVGDAIPAVNISDFSLKVARNLDKKGWNLGGAGLRSRPPVLGKPEITGKITAEYTDNVLRDAYLAQTPLVLILTFTSGSNVLQIAMPAIKLKGEVPTSNGGDVITQSIDFEAFDNGTASQPIFIVYRTADTTP
Sequence
>43623..44183
MicrobacteriumrhizomatisMTADLAVDQDKLRKRLDAVKEFSPALMRGTRKLLRTTGDEVIAEQSAILDGPLPRGIRAAGKRVVIRRNKKTGKLGLRTLNAYREQDVRSSGRSTGLRKGIKAGLRTRVVLGKTRTEVRVQTTGARENGSAFWQSKKFRHRVFGRDEFVYQQGQPYFWGPAYRGAAGMVRRIDDIADQAFKQIPLE
Sequence
>44213..44566
MicrobacteriumrhizomatisMATLKVGGRELVAKPLSKARVSDIIELQRQSGIKEISSIREAVEEADILGNVILSFLTQHNAGFRVKWDDLIDGPLEDLGEYLPDPEPEGEGKEDANPPQAETAADDAADVEASTPE
Sequence
>44779..46581
MicrobacteriumrhizomatisMAGSAKDFILNLVVDNSDADKGWDSFEKSAKGAASAVAAAWGAAGVADVIGGALDSGASNAKVSASLGLTAEESARMGKVSGDLFAQNYGEASDISEAVESVVSSIGGMRNASAPDIQAMTADVINFSKAFEQDVGRSAQIAGQMVTQGLAVDAGQALDLLTLSMQKVPKELRGDLLDAVDEYGGMFNQMGISGEQSMSMLVAASQKGMYGIDKTGDAIKEFAIRATDMSSATQGVYDMLGLNSQEYANMLLAGGEVSADAFNTIVLGLERIDDPATRANAAITLFGTPLEDLGVDGIPKFLGSLHGVTGGLGDVDGATKAMGDTLNDTAQNRIDTMKRGVEGWMRSMVEAGGPLGELTAGAMAFGPGIAQAGSLLAGVTGLLSLFRGATIFGTAATIANTAAQTANNVAWLASPVTWIIIAIIAAIGLLVAAGIWLWQNWDGVTKWIGEAWSNLMGAFENGGRQISDFFGGIPDAIGSAFEFAGNGIMQIGHGVATAFAWLWNNTVGAINFEVPGWVPFIGGQRVSFPQIVVPALAAGGIALGPTLALIGEAGPEAVVPLSRAGDYGLGGGGDVVVPVNFSIDGRTILEAVIRAARKRR
Sequence
>46584..49019
MicrobacteriumrhizomatisMQTAPVGFDAAIAARSIDTLTVEAAAATSGVDVAAATGWGERITVDRQMSGELPEEASDVVGSVSTTLTIEGDAYAPGAPSPMRDAEAWLNSASSVKAGYGGIKVPVFTGRVADLDASEGSGALTLTARDSSERLTAPVLLRPYGSYGRRSATGAAFRHPTNTQAVVTSILHTNGIRMTPAPRAGCELSVPGVGGWLADVGWTAPLGQSNVTSPWLVPGRFGSMPDSSAEIIRGYFATRRAFSGSVTMVEAFVLFASGMSQELLRIQSYVGAAVTLEVASGSLSVVWRPDPSTSSVVASASIANGWHHVAFEVVPRAYVQVWVDGVSVLSTTSVWAGALPTTDIDCVIWSPGAMQGVAAHWNAGAYNAVPTPSIMTFTPDADLSTGALDLMSIPDVDGRASWEVLQEIAQAELGMVGFSEAGRFFFKSRADLAANTSPVATWGIDLIDDIHASVSMDSVFTRATAKVKRVVGVDSGRGTVDVVPSLIADSVLSVPVGTSSVIVSASQPNVVDGQQVAIITATGAALNVPVGMVLCYGENGLSRYTGGQVTAWITNVGIKSWRVTFRNDSAFQLYAAWPADFVSAGTQFGLKAGDPGFWINGYTYDPSNALDEVVDRSNAGGVGSWGIRLHQFSDSVWRQDAVPARAFLDAMLADTAQPRAQIADVTVPADPRWQIGDPVRVTDWRGRVPGFVARITAIKLTIDRAVENGMTGVYGLRQIPGAIPRVTSGPADRSVSAGSTAAFTVAATGAAGYRWQVLVPGGSGWVDIAGATSATYTTPATVPADSGKQYRCNVTNATGDDWTGAATLTVT
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 1811712 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: F6B43_00205 (Region 1)
Locus: F6B43_00205ORF Start: 32076
ORF Stop: 33092
Strand: Forward
Protein Sequence: MTDIKGGYQRPTASSYVSSSWEDHKDRPTPSTEPGTDYGVAYGTTLYAPEDFEVIGVDHSNDGPEGRRLSLLLGDGSPTSSIHLSEIWVSEGQRGKRGDAVGKTGASAWGSDWGVGAHVHQTLWENMPIRFGTWATIDFEARVGDDNDGATLFDQTVALEQAFLNAAQGESLVVDGIFVETLPDGSEGKTKAAIKRYQTYLKGRGWYDGEIDGYWGGQTQAGHEKRYPEWVAETTPAPNPSYHTATVADLAELEYVNGLQKIAHLYGYGANQAQESWMDNRWGGGSQSGLQAFLDQNHGGSLATWLRSRWGYSDNDDLWGPNMRAAAVRAEHENFLAL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00205, hypothetical protein, phage(gi100023), PHAGE_Microb_Eleri_NC_042109
Homolog/Ortholog E-Value: 2.09e-07
Locus 2: F6B43_00210 (Region 1)
Locus: F6B43_00210ORF Start: 33240
ORF Stop: 33566
Strand: Forward
Protein Sequence: MSEPVLIAVLTLSGVALTALGAVLGHLLSSRTQKRAASIQAEANKSTADNALIDQLQEELGRYRDATDKRLDRLETENRGYRAFLGVQRDHMAAHGVPLPEWPDGLPR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00210, hypothetical protein, phage(gi149882842), PHAGE_Microb_Min1_NC_009603
Homolog/Ortholog E-Value: 2.77e-38
Locus 3: F6B43_00215 (Region 1)
Locus: F6B43_00215ORF Start: 33586
ORF Stop: 34371
Strand: Forward
Protein Sequence: MRDFFARLAGWFTETRRAAIQAFVASIITVLVMLGATTADQGTALAALVASLLLAAQGLIGLALLRPSDWYTWLNETGRGVVYALGLAIGGAGVAFNLFTPETSGVIVQVATAVASILVAAVQMMNVGTIADAGSSIVPAQADRHAVLASVAEKYGYVIAPKLADADAATLSADLAVRGWAVGVYAPEVAPLESLRPITDLNIGRVDILDVFADLLSFRGTRFDLILSTVPLTREILDALGPYTVTSEYPGDRVRFIGATS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00215, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: F6B43_00220 (Region 1)
Locus: F6B43_00220ORF Start: 34497
ORF Stop: 34754
Strand: Forward
Protein Sequence: MSAHREATPGRVVLYTLTAQDAAAIGELDPHTNQHRVGDVLPMLIVRVWSVGVNGQVFLDGPRTLWVTSRPEGDGPGTWAWPGRV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00220, hypothetical protein, phage(gi100019), PHAGE_Gordon_Attis_NC_041883
Homolog/Ortholog E-Value: 2.38e-12
Locus 5: F6B43_00225 (Region 1)
Locus: F6B43_00225ORF Start: 34888
ORF Stop: 35100
Strand: Backward
Protein Sequence: MSEDKVADEAKAIVEITERLRERFPDASPQSVADAVEAARASFSESKVRDFIPVLIERDAKQRLKAARSQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00225, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 6: F6B43_00230 (Region 1)
Locus: F6B43_00230ORF Start: 35218
ORF Stop: 35508
Strand: Forward
Protein Sequence: MSPGEYARLLAIVCPPESVCWLCRGTLGPIRHDLGGRHRLGPSLDHVVPASKGGTWDLSNLRPAHQCCNSARRDRPPSIPRGVRSSRWANAGRRGT
Homolog/Ortholog Species: Terminase
Homolog/Ortholog Protein: F6B43_00230, terminase associated HNH endonuclease, phage(gi985760306), PHAGE_Strept_Jay2Jay_NC_029098
Homolog/Ortholog E-Value: 2.64e-09
Locus 7: F6B43_00235 (Region 1)
Locus: F6B43_00235ORF Start: 36016
ORF Stop: 36336
Strand: Forward
Protein Sequence: MLAAGWIRDAGYRVVVDGPVESAVRAQLGEPNGDAEATRFAMVFTAARILDDPNTNARSIKPAIEAMRFALADAEGDGGANDAAAVMDAIRDAARGGDGSAVGNAA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00235, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 8: F6B43_00240 (Region 1)
Locus: F6B43_00240ORF Start: 36260
ORF Stop: 37837
Strand: Forward
Protein Sequence: MPPQSWTRSGMPPGVETVPRWATPRNPARETRGAEVVGVMRVLGQEPMPWQREILDTAFEVDSFGLLWYREIVIIIPRQSGKTTIIIPWGVHRALMWPERQYILYIAQTYAKALEKLQEEQHYRIKRSPIGKLLQPSRSGTTLRATNGNHHMLFRNGSKWSIDAATESAGHGSTLGLGIGDELFAQKDDRLEQAISPAMIAVPDAQRLWISTAGYSARKSPFLFNKREQGHARTELLRADPRLLNDGRYRSLFIEYSAPLDADPDDPMTYWGCMPALGFTQTIANVISERENLKDGFFRPYLNWWSDDLSVEWKIPKARWEAVADPDSAATRPEVVYVIDISPDSAWASIGVAAARDDGAIHLEVLADAPRVIDYDDPEGDWIIDGHAGADLPGILALVKEADGPVYVELKTAGFLIPKLREHGIDARLMADTDIAAAGPGLLDAVVTRAVRHTGQDEITDALKEAAVQKFGDGWRWTRSKSMRPISALVTVTYARQMLATLFPDLAYDPVAAFRNANGIKKEAS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00240, hypothetical protein, phage(gi100014), PHAGE_Mycoba_Bongo_NC_041970
Homolog/Ortholog E-Value: 6.91e-25
Locus 9: F6B43_00245 (Region 1)
Locus: F6B43_00245ORF Start: 37834
ORF Stop: 38052
Strand: Forward
Protein Sequence: MTERRKPLEVVAAAFVAVVAFLAAEWQDVLEVVGMLLIVVGIGLWSLSAGLIAAGLALLLVVYPAIPRRWRR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00245, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 10: F6B43_00250 (Region 1)
Locus: F6B43_00250ORF Start: 38049
ORF Stop: 39206
Strand: Forward
Protein Sequence: MSVFSRPETRDLSAEDVWGPSWQSLGRGAARRQAAAYAAIRYIADQWAQSTVTVTETRKGEREPVATPLILSDPSPTMSRWDSKIQMVTELKSRGNAYAVVDSARRYCQWIPKDFVTVDDSNPLLPIYRLLGREVTLVKQGGILLHVREQTRAGSVEGLSPIEEFAASFEWADLARQYGRRWFKQSAMPPAILQAKGAKGGQNLAEARDDFIRAASEGKPVALPGEWDYKPIMIPPEQAQFLQTIEASATEIAIIYGVPPEKVGGKSGSSRTYSNLEMDQRSFRIETLGGISGRAEAAQTDILKPDQEVTYDLSRLERPSLLEFMRAYTEQLRNGTITLPEARRDLGRRGLTTDEIDDWQKHYATTKSESESLAQSISTSITEGA
Homolog/Ortholog Species: Portal protein
Homolog/Ortholog Protein: F6B43_00250, portal protein, phage(gi971751162), PHAGE_Mycoba_Ariel_NC_028876
Homolog/Ortholog E-Value: 4.32e-25
Locus 11: F6B43_00255 (Region 1)
Locus: F6B43_00255ORF Start: 39203
ORF Stop: 39889
Strand: Forward
Protein Sequence: MTMSGAVIERRVIDRPVEFRAAPEGSSSPGILGGYAAVFDQISRDLGGWFEEIAPGAFGAPIEGGALDLKLHTRVIARAEHDSRLLLGTTNAGTLRLFIDDIGLRFEIDLPNTNAGRDVAELAERGDYVFASFAFSALEADYREDADGRFIRTVLRATLHDVAPVADPAYWGASAQMQRAFDLEAARASLSPAPAEPGEREATVRSAAATMTRETHPALVNRPRKRGI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: F6B43_00255, gp35, phage(gi40807286), PHAGE_Strept_phiC31_NC_001978
Homolog/Ortholog E-Value: 1.05e-23
Locus 12: F6B43_00260 (Region 1)
Locus: F6B43_00260ORF Start: 39904
ORF Stop: 41139
Strand: Forward
Protein Sequence: MTSIQERIKSLAEEQKRAWETEGKPLADIAAERALTGEEHEKFERLTRDFDSFDDRITLLVQQRDLEQRAMQFAGELLGNRSAFGPAADLADFAQNIRKILGGEERGLEYVPTPEEVRSFSESRALSVGTASAGGNAVGASFLARLIEPLRQFSGIYAAGAYVFVTEKGESVTLPRLTSFGAAAAATEGTQIGGTDPTFGQIAFGTKKYGEYVGISNELILDALFDIEGFATRLVGENIAVLLGQDLVTGTGTAQPAGIATVTTLGVTGGAGVAGAPSWDNLIDLQESVLAPYQANAAWVASNSAVAGIRKLKDGSGRYLWEPNGQTGAPAQLLGAPVFRDPFVASTGLGAKSMFYGDFSRYWVRVVGGVRVERSDQALFGSDQTAFRGVLRADGRLMDPSAVKHFIGNAA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: F6B43_00260, gp36, phage(gi9631145), PHAGE_Strept_phiC31_NC_001978
Homolog/Ortholog E-Value: 4.58e-39
Locus 13: F6B43_00265 (Region 1)
Locus: F6B43_00265ORF Start: 41136
ORF Stop: 41402
Strand: Forward
Protein Sequence: MTPAKVADAAALEAEAKAAAEASAASDAAAAEVEAVEPEGVTVVMVIGISGLRDGEPWPAPGESIVLPADEAALYIANGYAKLPADEK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00265, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 14: F6B43_00270 (Region 1)
Locus: F6B43_00270ORF Start: 41476
ORF Stop: 41847
Strand: Forward
Protein Sequence: MASNWPLGAADLRKALDYQVGQDDAGELTLYMSAACERIDKKTGRRSEPTRHEVDGKVPVVFLLAARKLAKLWWTQDKRTNRTGRQTGDEIDPSEGVGGVDLPRVVAGMLADYPDRLYPVETP
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: F6B43_00270, phage gp6-like head-tail connector protein, phage gp6-like head-tail connector protein
Homolog/Ortholog E-Value: N/A
Locus 15: F6B43_00275 (Region 1)
Locus: F6B43_00275ORF Start: 41844
ORF Stop: 42314
Strand: Forward
Protein Sequence: MSTISASTAAYTARAGLLAAVRAALADETKVDIDAGFLGQPGHNDWVAMGETIGVDVDPKTVGPRRQRDETITLTLNVGAFKPGHTEAAVVAAFTRADDLLRLISTYVSAGENTELGGVVAWCLPGSADWVGAEIDGGFQVEIAATFICAHRVRAA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00275, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 16: F6B43_00280 (Region 1)
Locus: F6B43_00280ORF Start: 42334
ORF Stop: 42603
Strand: Forward
Protein Sequence: MAKFKNVSPLGALDIDVLGLRGVKSGEEFEVPDELASMFVGQVGTFEGVEVPPAVVAEWDAYMSDGEAVEPVAIAEPDQSKTRKKGAGE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00280, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 17: F6B43_00285 (Region 1)
Locus: F6B43_00285ORF Start: 42600
ORF Stop: 43598
Strand: Forward
Protein Sequence: MTQQLDFSVGMGKETTYGSPSAVTRFFESEAKAKYDVKTIKGSGLRPTKGVARTSRQSISGFEGSTDIELDAPTRGLGFLLNAVMGAVTNTLVSTGLYQQVHTLSTTDPVASYAIQEALPPIGGGASNVHTFRGCVFDSLEISAKEGAYLSVKLSATILKMLTTGATAASYPSDDTLFSFVHGSIQVGGSLTEPGATTLAVGDAIPAVNISDFSLKVARNLDKKGWNLGGAGLRSRPPVLGKPEITGKITAEYTDNVLRDAYLAQTPLVLILTFTSGSNVLQIAMPAIKLKGEVPTSNGGDVITQSIDFEAFDNGTASQPIFIVYRTADTTP
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: F6B43_00285, gp39, phage(gi9631148), PHAGE_Strept_phiC31_NC_001978
Homolog/Ortholog E-Value: 1.44e-14
Locus 18: F6B43_00290 (Region 1)
Locus: F6B43_00290ORF Start: 43623
ORF Stop: 44183
Strand: Forward
Protein Sequence: MTADLAVDQDKLRKRLDAVKEFSPALMRGTRKLLRTTGDEVIAEQSAILDGPLPRGIRAAGKRVVIRRNKKTGKLGLRTLNAYREQDVRSSGRSTGLRKGIKAGLRTRVVLGKTRTEVRVQTTGARENGSAFWQSKKFRHRVFGRDEFVYQQGQPYFWGPAYRGAAGMVRRIDDIADQAFKQIPLE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00290, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 19: F6B43_00295 (Region 1)
Locus: F6B43_00295ORF Start: 44213
ORF Stop: 44566
Strand: Forward
Protein Sequence: MATLKVGGRELVAKPLSKARVSDIIELQRQSGIKEISSIREAVEEADILGNVILSFLTQHNAGFRVKWDDLIDGPLEDLGEYLPDPEPEGEGKEDANPPQAETAADDAADVEASTPE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00295, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 20: F6B43_00300 (Region 1)
Locus: F6B43_00300ORF Start: 44779
ORF Stop: 46581
Strand: Forward
Protein Sequence: MAGSAKDFILNLVVDNSDADKGWDSFEKSAKGAASAVAAAWGAAGVADVIGGALDSGASNAKVSASLGLTAEESARMGKVSGDLFAQNYGEASDISEAVESVVSSIGGMRNASAPDIQAMTADVINFSKAFEQDVGRSAQIAGQMVTQGLAVDAGQALDLLTLSMQKVPKELRGDLLDAVDEYGGMFNQMGISGEQSMSMLVAASQKGMYGIDKTGDAIKEFAIRATDMSSATQGVYDMLGLNSQEYANMLLAGGEVSADAFNTIVLGLERIDDPATRANAAITLFGTPLEDLGVDGIPKFLGSLHGVTGGLGDVDGATKAMGDTLNDTAQNRIDTMKRGVEGWMRSMVEAGGPLGELTAGAMAFGPGIAQAGSLLAGVTGLLSLFRGATIFGTAATIANTAAQTANNVAWLASPVTWIIIAIIAAIGLLVAAGIWLWQNWDGVTKWIGEAWSNLMGAFENGGRQISDFFGGIPDAIGSAFEFAGNGIMQIGHGVATAFAWLWNNTVGAINFEVPGWVPFIGGQRVSFPQIVVPALAAGGIALGPTLALIGEAGPEAVVPLSRAGDYGLGGGGDVVVPVNFSIDGRTILEAVIRAARKRR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: F6B43_00300, hypothetical protein, phage(gi100029), PHAGE_Gordon_Sour_NC_042132
Homolog/Ortholog E-Value: 1.47e-67
Locus 21: F6B43_00305 (Region 1)
Locus: F6B43_00305ORF Start: 46584
ORF Stop: 49019
Strand: Forward
Protein Sequence: MQTAPVGFDAAIAARSIDTLTVEAAAATSGVDVAAATGWGERITVDRQMSGELPEEASDVVGSVSTTLTIEGDAYAPGAPSPMRDAEAWLNSASSVKAGYGGIKVPVFTGRVADLDASEGSGALTLTARDSSERLTAPVLLRPYGSYGRRSATGAAFRHPTNTQAVVTSILHTNGIRMTPAPRAGCELSVPGVGGWLADVGWTAPLGQSNVTSPWLVPGRFGSMPDSSAEIIRGYFATRRAFSGSVTMVEAFVLFASGMSQELLRIQSYVGAAVTLEVASGSLSVVWRPDPSTSSVVASASIANGWHHVAFEVVPRAYVQVWVDGVSVLSTTSVWAGALPTTDIDCVIWSPGAMQGVAAHWNAGAYNAVPTPSIMTFTPDADLSTGALDLMSIPDVDGRASWEVLQEIAQAELGMVGFSEAGRFFFKSRADLAANTSPVATWGIDLIDDIHASVSMDSVFTRATAKVKRVVGVDSGRGTVDVVPSLIADSVLSVPVGTSSVIVSASQPNVVDGQQVAIITATGAALNVPVGMVLCYGENGLSRYTGGQVTAWITNVGIKSWRVTFRNDSAFQLYAAWPADFVSAGTQFGLKAGDPGFWINGYTYDPSNALDEVVDRSNAGGVGSWGIRLHQFSDSVWRQDAVPARAFLDAMLADTAQPRAQIADVTVPADPRWQIGDPVRVTDWRGRVPGFVARITAIKLTIDRAVENGMTGVYGLRQIPGAIPRVTSGPADRSVSAGSTAAFTVAATGAAGYRWQVLVPGGSGWVDIAGATSATYTTPATVPADSGKQYRCNVTNATGDDWTGAATLTVT
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: F6B43_00305, putative tail protein, phage(gi849250081), PHAGE_Escher_vB_EcoM_VpaE1_NC_027337
Homolog/Ortholog E-Value: 2.58e-09
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download