Submission Results
Sequence Name: Not Available
GenBank Accession Number: WEOQ01000004.1
GenInfo (GI) Number: 0000000000
Download Results: WEOQ01000004.1.PHASTER.zip
gi|00000000|ref|WEOQ01000004.1| Pediococcus pentosaceus strain FAM18813 FAM18813_scf0004, whole 188608, gc%: 35.71%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 20.2Kb | incomplete | 20 | 25 | 168132-188378 info_outline | PHAGE_Lactob_LBR48_NC_027990(3) | 34.28% | Show info_outline |
Region DNA
>1 168132-188378 TGAAGAAGATGCTAAAAAAATTAGAAATGTAGTTAGTGAATCAGTTAATGCCCATATGAT TGCAGATGTCGAAGTAGGTAGCTTTTTGTCTAGCGGGATTGACTCTAGCTATGTATTAGC AGAGACCGCAAAATTACAACCAGTTCAATCATTTTCACTAGGATTTAAAAATTCTAAATA TAGCGAATTAAGTTATTCAACTGATTTTGCAAAAACAATTCAGCAAAAAAATACGCCATT ATTTATGGATGGCGATGACTATTTTGATATTTTGCCGACTATTATGTATTACATGGATGA ACCTTTGTCCAATCCTTCAGCAATGCAGTTATTTTATTTATCGAAGGGAACACGTGAAAA AGTTAAAGTGGCTCTATCTGGAGAAGGAGCGGATGAATTCTTTGGTGGTTATAATACTTA TTTGGAAGCTTTACCATTTGAACATTATCAAAAATTAGTTCCTAAATTTATCCGAAGAGC GCTAGCTAAAATGGTGACCCCCTTGCCTCGTTTTCATGGTAGACGTTTCTTGATTCGTGG AACTCAGCCTCTCAGTGAACGCTATTATCGGGTGAATTATGTATTTAATCAGCAAGAACG TAACCAAATTTTGCGAAAACCAGAACTTAATATTGATGCGGGTACATACACCCAATACTT GTTTGATGAAGTCAAAGATCAAGATGAAATGACTCAAATGCAGTACTTTGATATTAATAC TTGGCTACCATTTGATATTCTGCATAAAGCTGATCGGATGGGAATGGCTAACTCACTTGA AATTCGCACTCCACTAGTGGATCGCGAAGTAGCAAAATTTGCAGCTACAATGCCAATTAA GACACGTATTAATAAGCATGAAACAAAAGTAGCTTTACGACGTGCAGCAGAAAAAGAACT ACCAAAGAAAGTAGCCAATAAAGAAAAACTTGGATTTCCCTCACCAATTGCTGGGTGGAT TAAGGAAGATAAATATCGTAAGCGAATTGAGGAAGCATTTAATTCCGATGTAGCTAATAA ATTTTTCAATACGGAAGCTCTGATGCAGATTTTGAAGGAACATGTTGCTGGTAAATCTAG TATGCAAAAGATTTTTACGATTTACACCTTTATATTGTGGTATCAAGTGTTTTTTCCAGA ACAAACTAGTGCACAGAGACGGTTAAATTAGTTAGAAAAACTCAAAGATAGAAACGACTT TTTATATTCAGTGTGATTTAAGCAAGATGCCGAAGTTTTAACAGCTATTGAAAAATTTCA TAACTTTAGTAAAATACGGTTATTATGAATAAAACTGTAGATGATATAAATCAAATTAGA TTAACAATTTTTAAAGCATTAGCTGATCCAGTAAGAATTAGAATAATTAACTTTCTTAAA ACCAAGGAGCATGAAATAGCGTGCGGAGTGGTAGCTAAAGAGATAAACATTAGTAAATCG TCTGGCACCTATCATTTTAAATTGCTACAACAAGCTGATTTAATTAATGTTAGAAAAGAA GCAAGGGAGAAGTACGTAACCCTTAATACAGATACATTCCATAAGTATATTACTGATTTT TTTGACACTGAAAATTAATTTAACCTTGCAAAAGCAGTTTAGCCTTAAATGGCTAGACTG TTTTTATTTTGTATTGTAATAAATGTTAACAAATTTAATTCTAAAATTATTAAAGGTGAT GGAATTGGTGTTGTTGATAATGATCTTAGAACACGGTCTGCGGTCGTATCGAATGAATTT GCCGATACTTGGAAAAAGACTCATGATAAAGTAATCGGCTCTTATGTAAACTTAAAAGGA TACAATTACAAGATTGTTGGAGAATTTAAAGCTAATCAATTGGTAAATCTTTTTCAAGAT ACAACAGATATTTATGTCCCCAAAAGCGCCTATCAGCATGTTGAACTGTATAACAAAGGC GACGGAGTTTTAGTTACTATGAAAAAAGATGCCGATTCGCATAGTGTATTAAAAACGGTT GCTAAAAATTTACGTACAAAGGGAAGCGTAAAGTACCGAGGATCTTATCATATTCAAGAC AATGCGCAAGCAGCTTCTGCGGTTGGTCAAATTTTGAAAGGAATTACGGCTTTTGTTAGT TTAATTGCCGCAATATCACTATTTATTGCTGGAATTGGGGTTATGAATATGACGTATATA TCAGTTGCAGAACGAATGCCAGAGATTGGAATCCGGCGAGCGATAGGTGCAAGATCTAAA GATGTGATTTTTCAGTTCTTAGTGGAAGGGACTATGCTGACTACTATCGGTGGTATTGTT GGTTACTTTGGAGGTTCTTCATTAGCGATGTTAATCGGGTTGGCATTACCGTTTAAGGTC AGCTTTGAACCAAGTTCCTTTTGGTTAGCGTTCTTAGTATCCTTTGCGATTGGATTGATA TTTAGTGTTGGCCCTGCTAGAACAGCTACCAAGAAGAATTTGGTTGAATTAATGCGTTGA TTAATATTAGTAAAGATAAGTCTTAAAATAACGAAAGATTTTATTTAAGAAAAAGTAACC TAAATTAAATTAAGAGGCATCGACCTTTTTTCGATGGTCTTTATTCTATAGCACATTATT ATACTAACGTGTACTTTCTAATTAGATATTTAAGATGAACTTACAAATAGTTAGTGTAAT AATCCCGATATTAGATTTTTGTTCAATTAAGCCAGATCTTTGCTATTTATGGTAGGATTC ATGATATTTGAAGAAGATTACTAGAACTTTAAAAGAGATGTAAAATTATTGCGCTATTAT CTTGATTACGATTAGTACAGCTTGCTTGTATAAGCAGGCTTTTTTTCGTGACTTATATTA TTCATGTATAGAATTGTAATGTATTGTTTACTGCTAGATACTAATAATTTTTTTAGAGTA CTAACTAAATTAGAAATCAATTAATATTTAATTAAAAAGCAGTTGTATTTTAATTGGTTT GAGCTTATTATAAGGACATTAAAAGCAGATATTAATAATATTTAATGTAAAACTACGAGA AATTGATGAAAAGCAATGTAGGAAAAAGTTTTTACTGGTATGGCTAAAGTTTGTTCTACA ATAATTTAATAGAGATTGGGTATGTTCCATAGCGTATTCAATCTTTTATTTGTAAGGAGG AGTAAATAATATGAAATTTAAAAATACAAGATATAACCAACAATTAGAAAGATCACAAAT TAACAAAGAGGGGCAAAAGCTTTTAAATAATTTTAATGTTATTGACATAGATGGACTAGA GCAGAGGATGATGGTAAATAAATTTGCAGTAGAAAATGATATACCGATGGTACATGTTTC GGCACAATATGGCTATGGTTATGCATTCACACGTCTTAATCGCTCAGATCCTTGTTTATA TTGTGCTTTTCCAGATCCTCCTGAAAGTAGGAAAGACCCACTTGCTGTATTTGGTGTGGC AACTGGAATTGCAGTTGTAATGGGTGCGGGGAAAGTTATAAAGATTACCTTACATAAAGG AGAGCTTGCAAGGGGCTATATGTTATCAAGCTCAGTCTTTCAAAATGATTTTTATAAGTT ACCAGTCGAAAAGAATCCTAATTGTCCAGTTTGTGGGAAACTATAGAAAATGGAAGTTAG TAAGAGAATCAGTAAAGCAGCTATGATTTCTTCGGCGATAGATTCAATTGGGACTGGAAC ATTTGTAAGTGTATCTACAATATTTTTTTCAATGTACAATAATGTATCTGCTACTACCAT TGGCTTGGGATTAACTCTATCTGCAATTTCGGGAATCTTATTTTCCTTACCAATTGCATA TCTTGCTGATAGGTATGGAAAGTTAGAAATATTCTCAATATCGTACGTATTAAGAGCTGT GGGTACAGTTGGTTGGTTATTTATTAGTGGAAACACAGCGTATTTAATGTATATGGCATT ATTTGGAGCAATAGATCGTTCGGCAGCATCATTGACTAGAAGCTTAATAATTGCGCCGTT AAATCGGAAAGAAGCGGTAGTTTTAATGGGACGGATGGCATTGCCAGCAAATGTAGGTTA TGGAATTGGGGCTGGAATTAGTTCGGTTATTCTATTTTTGAAGTTAGGGTTACCGCTAAT TATTATTACAAACGCAATATCATTTATTTTAGTCGTTTATGTATATAGAAGGGCCTTAAA AGGGCTTGATGTGAGCAGTGCTCGTATCAAAAAACCGCTTTTAATGTCTTGGTCAGTTAT AAGCACGTCCGTTTTTGATAGAAATAGATTTAATTTGGTAATTGAAAATCTTTTATTTTC ATTTCACAGAACACTTTTGAACGTGTACATACCTTTGGTGGCCGTGTTGTATCTAAAAAA TATGAATTGGATTGCCCCATTGGCTGTTATTTTAAATACTGTAGTTGTTTCTTTGTTGCA AGGTAGAATAAATCGGTGGGCATTTGTGAATCATCGGTATGACAAGTTATGGAGTTTATC AGGACTGTTAATCGCAATTTCATTTATAGCGGTAATAGTTATTTCAAAATCAAATACGCG TATTTTTGTTGAAGTATTGTTAGGAATGGTTATTTTATTTCAAATTTTAGCAGAAATGTT TAGTAGTGCATCATTGGCAGTTTATATGACAATTTTTAGTAGGGAAGATTTACTAGCTAC TGATTTGAGTGCTATCAATCTGGGAGGTCAATTACAAAATATGCTGGGCCCAATAATTTT TGGTACTACGGCATCATCTACGAACGGTATTGCTGCCGGTATAATGGTCCTGGTCACTGC GGGAGTTGCTATGCGAGCTGCTATGACAAAAGGAAAGAGGGATAAAGGAGATGAGTAGCG GTGAAGGAATACCAAGATAATAATTGGGATAGATATTATCAGAAAAATTGGAATACGGGA AAAAATAGCTTACCCATCACTAAAATAATCATGAATAATGCAAAAAAATGAGAAAGGCTT TTACGTGGGCTTGGGAACTGGGCGAAATGCGATTCCCCTTATGGATGGGGTGTAAAAGAG CCCTAAATGAATTTAATAATGGTAAAGAAGCCTCGTCTAATAAGAAAAACAATTTGATGA GACTATGTTATTTGCATGGAATTTTAACAAAAATATGGTTTTAATTTCAATCTTAGAAAC AATTTTAATAAAATTATCTTGAATAGTGGCAGTATGTTACATATTATCATCTGTCTTCAA CTAGATTTTGTCGGCATGGTTTGTAGCGTCTAGTATGACTATACGTCTTTTCTATTGAGC ATCAACGATGAATTGTCTATAACCGAACCCCTTTAGACTCTAAATTTTCCAGACATTCAA TTAAATACTGTTGATCATGTTCTGGATAGATTGGGGAAGTTAGTGGGCAAGCACATAATT CTAAATAAGGCGGACAATGGAAACCACGGAAAGTTGGTTCAAACCATTTAGGGTTAGGAT GATAACCTCGTGACTGCATCTCAGCTAATACTAATCGATGAAATTGATAAAGTTTGTAAG GAGAATGAGTAAAAACATAATCAACGGTTGCATGTTTTTTACCCCAACCGTTACCTCGTA AGGCCGCAATTTCTCGATGCTGTCCTAAAAGCTGGGCACGTGGTAGTTTGGAAATTAGTT TTTCATGCCATAATCGCATACAGACGACCCCCATTTTTAATTTAAGCATAGCGTAATTTA AAGATAATTAACACTAACTTGACTGATGAATTCTCATTAGCATACCTCTGAGTTAAATAT GTATTTTTTAGAACGGATATGATATAAATAGCTACAAAATAGTTCTTTTTGGAAATATTT AAAGAAATCTACTTAAAAACTTTTTAACTGACAAAGTTTAGCTTATTTGTAGTAAATTTA AATCTTATGTGAGGTATAAAATGAAAACGTTTTTAACAGCCACCTCTTTAAAAAAAGTGG TTTTATTAGATTATCTACTAGAAAGTGGGGCATGGTGTTCTACTAAAGAATTAGCAAAAG TAATCGGTGTAACGGATAAATCAATTTTAAATTATTTGGAAGAATTTAAGCAGTTATTCA AGTCGACCGAACAGAAAATCAGATTATTCAACGACCATAATAAAAATTTTCGAATTATAA AAGAAGAAGATTTTCCTATCTATACAATTTATTTGAAATTCTATCAAGCCTCTTACAATT ACAAATTAATTGATTTCATGTACCATAACCCTCACCAACGATTGGCTGACTATGCAGATA GTCAGTTTACGAGTATATCAACAGTTTTTAGATACGCTAAATTACTAAAATCGTATTTCA AACGTTATAAAATTCAATTTTTACCGTATAAGTTGGAATTAAAAGGAGATGAAATCAATA TTCGTAGTTTTTATTATTACTTTTATTGGAACTCCACACGGGAAATGCGGAATAATTGGC CATTTAATACTGAAACATTCTAGCCACTATGAACGCCGTTATATCAACATTTGTTTATTG CCTTGGGGACATTTGGGGACACTGACAATATTTCTATCGTTTTATCTTGTTCACGGGTCT TCTCTTCCTTAAGCATATGAGCGTAAACTTTTTGAGTAATACTTGTATTTGCGTGACCAA GTCTAGCCGAAACGTAGTTAATTGAAACACCTTTATAAAGTAAATAAGAGGCGTGTGAGT GTCTAAGTCCATGAATAGTTATTGGTTGTAAATCTAACTTGTTTATTAGTGAATCGAGGC GATTTCTTACTGTTTGACGTCTGCAATTAAAAATAAATTCTGTACTATTGTTTTTTTCAT TGTTGATTATATTAGCTAGCTCGTTAGTTATTTTTATATCACGCACAGAATTTTTATTTT TAGGCTTACCAACGATATTCCCAGAACGTGATTTACTAACATGAATGTTGTTGAAGGGAA TAGAGACGTCCTTGTACTGTAAGGCTAGCACTTCTCCAATTCGCATTCCTGTTTCTAATG CTACAAGGATCGCAAGGCTAGCTTTATCTAATTTAGAGTGATATAAATAATCCTGTAATT TTTCAAATTCTGTAACTGATAAAGCGTTAGTTTTTTCGCTACGTTCTATACCATGTGGTT TAAGCCGTGTGAAGATATCATCTAAAATATATTTGTCGTAAAGAGCATCTTTTAGGCAAG CTTTAATTCTAGACACAATCAAAGTCATAGTGCCTTTAGAAAGTGTTTTACCGATGGTAT CAAGTCTGGATTGTAGAAGGGAATACGTTAAGTTTTCAAGGGTAATCCCATCAAACGATT CTTTTATGTGTCTTAATGTTGAAATATAAGTATTATAAGTTGACGGTCTTATATCGTTTT TCTTGTAAGTCTCCATCCACATTTTGAAGTAATCGGCAAATGTCATACTAGAAGCTATTA TGCTTCTGTTTTGAAGCTTATCAGCTTCCATCATAATTGCCCAATCCTTAGCTTTTTTCT TTGTATCAAATGTTTTAGATACCTTACGTCGTACGCCACTCTGCATGACGGATACGACAA CTCTAGTTCTTTTACCTCTTTTTTCAAATGATGCCATAATGGCGAACCTCCGTTCTCTTT TCGGAAGTAGCCCTCAATGCTAAAATAGACAATATAAAAGAGGACTACTTAATGTAGTTT TTTAGGGTTAAGTTACATCCATTACTTTGGCGAGTGGGGGATGTGGCTTTTTTATTTATC CAAATTCATTTCTTTTTAGCATCGAATTCTTTTTGTGCTAAAATGACGATAGAAAAAATT AGGGAGGACGGCTATGAAAACTTTTAATATTAATAAATTACTAAAAGAAGTTAAAGCAAT TAAAAAGGATGCCATCCTAAAACAAAAAGAAATCAACAATTCTCAAGATAAAATGAAAAA GGAATTTAAGAAGAAAAAGAATAATTTTAATAATTTGTCTATTTAAAAATAGATTGCGAT CGGCTTAATGAGTCGATCGTTTTCTTTTGCAAATCCCATAGAAGTTAAAACTAATTCGGA CAGTGACGAAGTGATATTGCCAAGTTCTTGCAGTCCCAAATCTAGGCTTTGAGTAACTTC ATCTATATCATTTTTCTTAGTGCCAAGTTTTGATTCAACAATTCCTAAAATAAATATGGA TCTATTTGTGCCTGATAGAAGTTGCAACTGACCGCTGTTCATTCTGAAATTTTTACGTTC AGCATAAGATATTGAGTCCTTTGCAGAAATTAATATATTATTCTGAAAAAGAGTTTTTCC CATCTCGGCAACGTTAGCAGACAGTTTAAATCCGTTTTCAATTCCTTTGTTCCAAGTTGG ATTTCCGTTTTCCGCTGGAATAGTTTGCATTAATTTTTTAATTCCTTTACTTGTAATCAT ATTTAAAAATAATTCAAAATCTGTCAGTCTGAATTCTGACTGTAGAAGAATGAATTCCCC ATCTTGAGATTCTAAGGCGGAGTTTCTGACAGTTATTGATTCAGTTTTATCTAAAATCTT GATGAGACGTTCAATTTTATAATCATTAAGTACAACGTTTATTGTTTTTGAAATCCCCTC AGAATTACTTTCATTACTTGCAATTTCTGATTCCATGGTCGCCGTACCTTTAGCAAAAAT ACCATCTAATGTTCCACTCATATTTCCTTTGATCGTTGTAGATTCGCCGGCCTGTTGAGT TGAAACATCACCATTAACAATTGATTCCTTCAATCCTTTTTCTAGTTGGGCTAGCGCGGA ATCCAATTCAATTTGATCTAAGTATATAATTTCTTTATAGTCTGATTGCTCTGAGTTATC CATAGTATCCCCTTTAAGAAAATACGTAGCTTTTAACGAGAATCACGTTTGCTCGTATTT CCACATACAGAGTCGGACTGTATCTAGTCACCGGAGTGGAAAGGAGATATCATCTAAGCT GAGGGCTATCAAGTATGATTAAAAATAGGCCAATGCAGATAAAGATAATCCCCCAAAACA TCTGTGTAAACATACTACGATCACCAAAAAAGAAACGTAAGATATTTAAAGTTCGACCAA GAGTTATTATTAATGCTCCAATAAAAAATATAATTATTCCAATGATAGCCATAATACTCG TTTCCATAAACTATTCGCTCCTTTGCAAATAAAATATTAATGTAATGCGGTATAGAATGT AAAAAAACCTAAGAAAATACCAGGGATGTTAGCTGCAATGATCGGCCAATCACGTTCTAA CATCTTACTTGGCGGTTAGGGGATGTGGCTTCTTTATTTTGTGGTTATTACACATATTGT AGTAACCACTATTCCCACATACGGAGTCGGACTGTATCTAGTCGCGGGAGTGGGTAAGTT TATTAAAGTCCTAGAATCTGTTTCTTTTTAGCTGCAAATTCTTCTTGTGTGATAATTCCG TCATCAAGAAGAGATTTATATTTGCGTATTTGATCAGGGCCATCAAGAGTAGGCTCTGCT GGTGTATTTGAGTTACTTAATAAAGATGCTTTGTAACGTTCTGCAGAGTCTTTAATTTTA GAAACCATAATAGGAGCGGTGTCCTTATTTACTTGTTCAATAAGAGTAGTAATAGCACCA TTCGTTATTGATATCTTGCCTAATAACAATCCCTTTGAATAGGAGACTCCGTTTACCATA TCCAAGGGTATCTCAGTTGATTTTATTCCGTACAGCAGCCCTTTATCTATGAATAAAATA CGTTTTTGAGTAAGCACAATTAATACAGTGTTACCATCTACGAAACCTGATGTAGCATAT TGTATAACTTCATCATCATTTAATATTTCAGGTAATGCTTTAATTTCTTTTTTTGTTCCA AAGGTATCAGAAACATTAGCAGCAGAGAGTTGTTTTTTTACTTCTTGCAATTCCATAATG ATTCCTCCAAAAATATGTACAGCTTTTTACGTCGATCAGTATTTGGACGTGAGACTAATT AAATACCTATTTTTTCCTCAAATACATTATCTACCACATATCCTGTTTTGGATGGAATTC CAAAAGCGTCCATAAATTCAGTTGAATTATAAAAAGTTAGACCATTCAAATCACAATATT CTAAAAGTATTTTTGTCGCACGTTTGTTAGCTTTATATTCTTCTTTGCTATATACAGAAT TGGCAGAAAAATTATTAGATCCCTTATCTCCATTCAATATGTGGCTAATTTCGTGTGCAA ATTGGAAGGGGATTTCTTCAGGATTCTTCCAATTATTATTCATAAAAACAACCCTTAATG CGGTGTTTGATTTTGGTGCTTGATCTGGTTCACGAATGCTATCAAATTGGTATCCGATTT GATTTGCAAAAGCATAATCTCTTAAAAACGTCATTAAATCGTCCATACAAAAACCTACTT CTTATTTTTATTATCTAAATAACCTTTAATGATTCCACGCATTACTTCACGCTCCTCATC ACTAATCGGTTGTCCTTGATAGCTTCGTATTGAATTTAGAGCTTCTTCAACTTCCATGTC ACGAGTATCATTCACAGGTTCTTCTTTTTCAGTTTTTCCTAATAGATAATCAACAGATAC ACCTAAAACTTTGGCAACAGATTCAACCTTATCTATAGATGGCGTTTTTGTTTTCCATGA ATAGATAACATTTTGTTTGAATCCAGCTTTTTCATTTAGTTGAGCAAGGCTTAAACCTCG TTTTTTAGAAATTTCTTTTACTCTATCAAACATTGTCATAACAATATTTCTCCTATGTTT GACAAATAAAAATAAACTTTAGTTATAAAAAAACTTGCATTCTTTAAACTATAGTTATAT TATTAATTCATCAAGTAATCAGGCAATAAAAAACAGACCTATCAAAAACAATAACTTTGG CGAGGAATTGCGGTAGTAGTAGGTTTTTTATTGCTTATTTAATATGGCTTCATATTAAAC TATAGTTTAAAAAAAGTCAACGATACTTGATAAATCACTTGAAAAAATAAGGGGGTGTTT TTATTGATAGGAACAGAACCAGGTCGTGAAGCTGTCAAAAAATATATGAAAGAAAACCAC ATTACTTATCGCATGGCTGGAGTGCTATTCGGACCAAGTGCTTCGTGGATTCAACAAGTG CTTAACGGCAAAGCTAAAGGACCAGAAGCAACAAAATTAATTATTAGCATGATTAATGAA TTTGGAATCTAGAAAGGATTGAATAGTGAAAAAGAGAATTATATATAGAAAGCTAAAAGG ATGGCTTGTTTCAAATAATATTTCTCAAAAAAGAGTAGGCGAAATTATTGGAACAACGGC TAATGTGGTTAATAAAAAGCTCAATGGAACTGGATCCGACTTTAAGCTATCAGAAGCTCG GGCTCTTCATAACAAATTAAAAGTACCAACAGATTGTTTTTTTGAAATTGAAGTTCCTTT ATCAGAACAAAAAGAGACGTGCTAATAAATTTAAAAAGGAGTGATCATATATGAATGAAT TACAAAATTTCAACTTCGAAGGAAACGAAGTACGAACTGTACTAATTAATGACGAACCTT ATTTTGTTGGTAAAGATATTGCGGACGTTTTGGGATATTTAAATACTCGTGATGCTTTAT CTAAACACGTTGATGAAGAGGACAAGAATAGCGTCGCAATTCACGACGGTAATAAAGGAA ACCCTAATCAAGTAGTGATTAACGAATCAGGGATGTACAGTTTAGTACTTTCAAGTAAAT TGCCAAATGCTAAGAAGTTTAAACGCTGGGTAACAAACGAAGTTCTGCCATCAATCCGAA AACATGGTGCTTATCTGACGGATGAAAAGATTGAAGAGGCTTTGCTGAATCCTGACACGA TTATTAGTCTGGCAACTAAATTGAAGAACGAACGTGAAAAAGTAGAAGTTGAACGTAACG GTAGATTAATTGCTGAACAACGAGTTGAAGAGCTTCAGCCTAAAGCAGATTACTACGATC AAATATTATCGAATAAGGGAGTGGTAACGGTAACCTCGATTGCTAAAAATTATGGTATGA CAGCTCCAGAATTAAATAAGTTATTGAATCGGTTAGGTGTTCAGTATAGCCAGTCTGGAA GCTGGTACCTGTATAAGAAATATCAAAAAAATGGTTATACGCATACTATCCCAGTTCCTT ATTCACACAGAGACGGAAGACCAGATATTAAACCTCAAACTAAGTGGACACAAAAGGGCC ATATATTTATTTATCAACTATTAAAGGAACATGGAATACTACCAATGATTGAAATGAAAG ACGCGTCAGCGGTGTAGTTAAGTCGATAACTTGATGAATAAATAACAGAAAAGGAGAACT AAATGAATATTCAAGAAGCAGTAAAGCAATCGCTTAAAACGGGTAAGCAGTTTTACCGTA AGAGTGAAGGGGATCAACTAACATTTGAAGTTTCTAAATCAAATCGATGCATAGATATAT ATAGAAATGGAGAAAAAATTTCTGGTTGGTGGAATCCAAGAGATAACGATTTGATGGCAA ATGATTGGAAAATAAAAGAGTAGTTCCTAATGGAACCGCCCTTGATATTACTTAGTAGGA ACTTTTGTTGAGATTAAAATATCAGTCAACAAATCACTACCAAATTGTAGTTCGATAAAT CCTGAACCTTCAAGTGAAAGTAGAGATTGTGCAAAATCCATATCGCTTAGAGTAGAAGCT TTGCGAACTTTTGAAGGGTCTATATTGGTCGGACGACTATCGTCAGCAAGTTCAATTATC GTATTTAACAATTTTTCATTTGAATTCACTTGTATCACCACCCTTTAACTAAATTATATG CATGAAAGAAGAGAACAAAAGTGAAAATACAAAGCTGGTTAGAAGACCATGAACGTGGAT TAATAGCACTTAGTGGATTTTTATTAGGTGCACTAGGTGGAATATGTGGAGCAATTCTCG TTATCTGGTTACTTAATTAGTAAATCATTAATTAACCACCTTTTATTGAACTAACTAAAT TATACACAAGAAATAGGGAAAATAATATGAACAAATTAGTCATTATGAAAGACCAACAAG CAGTAACGACTAGCTTACAAGTAGCAGACAGACTAACAACGTTAGGAGCATAGAAATGAC AGTAAACAAAAACAGATTGTCTGATGACAAGTATCCAATGCTAATGGACAAAAAAACAGT AGCAGAGTATTTAGGAGTTTCTAAAAGTTCAGTTGATGTTTTTCTTTTAAACGACAACTT GAGTACAGCAGCTTTTGAACCTAGCAAGCTTAAGCGAAACTTTTTTATCAAAACGAAAGT TAATAAATGGCTGGAGGAATTGTAATGGTAGTAACAGTAAGTTTAGGACAATTAGCGTTT TATCTAATTTCAGTAGTAGTGGCAGGATTAATTGGTCACTCGATGAAAGGTGGTGAGAAG TAATGAAGTTAGTACGAATTAGTGACGACACGATTTTAGATGTTGACGACGTTCAATTCG CCATTTGGGATGATGAAGACCAAAAAGTAAAAATTGAATTCAAAAGTACGAATACCTATC TTTATACAAAAGATAAAAAAGCACTCGACGCTATTTGCGGTAGCGAGGAGCACTTAGTAA ATGATGCTAGTATGAATATTCTTAAAGCAGAGAGTATTAATTCTGGTCATTTGAATCAAC AAAAATACCCATCTCGGTAAATACATTAAAAAGGGTGATTAATGTTTGCTTCGTAGTGAT CTTGTTAATGTATTGAAGAGAATTAGCAAGGGCATTGATCTGTTCTTGGTTCAATTGGGT ATCAGATGAATTTTGGATATTGGAAGCAACATATTTCATTTCTGCTTTAATAGATTCTTC AGTCCAAGCAGCATCCATATGTTTATCAATTAGTTTCATTATCTGTTCATTGGAAAGTTG CATAATAATTTCACCTCCTTTCATATCGATTATACAAGAAAGAAGGTGTTCAGAATTAAG AATTTAAAATAAAAAGCCCGCTACGGCAATAGCGGACTTCGAAAACAAATAACATCAAAG GAAGTATAACACAAATGAATCAACAACAGTTCGAACAATATGAACGTGAATACGAACAAG AACGAGAACGCAAGGAAATTGAAGCCTTATTCGGGAAGGACGAACACAAGTGAATAATAT TGATGAACTTGAAGTGGAACGTACTAAGTTAGATCGGAAGTTACGTGGACTAAAAAACAG GAAAGCAGAAATTGTTCTATCTATTGAAGAAGTTCAAGACGAGATTAATAAAATCAGTCA GAAAGAACTTCAAATGTTCGACGGGAGAGAGTGCCAAACAGAATCATTCAAGTATGTACG AACAGCTAGTAATCCTAGCAAGCCTAGTTGGTGGCAAGTAGTTAAGACTGACAATGCCAA GCCAAAAGAAGTGGTTCAAGTATTAGCTGATATCGATGTGAACTTGATTAAGCGTGAACC AGATGTTTCGGCGATTAAGCGTTACGTTGCAGAAGGCCGTTTCATTGTTCGTGAAGGTGG TCAGTTAATCGACACTGAAACAGGAATGGTACTACCTTATAGAGCTAAACGTAAGGCAGA CAAGTTAACAGTTAAGGCGGTGGAATCATGAGTGAAAAAACGTTATATCAAAAGCTTCAA AATATCCACAAAAAAGTACCATACATTCAAAAATCCCAACAAGCTTCACAGTATTCGTAC GCTGGGTCTTCAGATGTCTTAGGCGCAATTCATGGTTTGATGGATGAAGAAAAATTAATT TTAATACCGCAAATTACTAATAAAAACACCGAAACAAGCCAAAATCGAAAAGGATCTACC GTAATATTTACTGAATTGATGATGACTATGACGTGGGTTAATTCAGATAATCCAGATGAA AAATTAGAGTGTCAGTGGTACGCACAAGGAATTGATACAGCTGGAGAAAAAGGTGTTGGA AAAGCACTCACTTATGGTGAGAAATATTTTTTATTAAAATTCTTCAATGTAGCCACAGAC GATTTAGATCCAGACGCATTTCAAGAAAATGTTAAAGCTCAAAAGACACCCGAATTGATA AACGATGAACAAAAAAAGACTTTAAAAGAATTATTTAACAGTATGGCAAGTGTTACCAAA ACACCGATTGAAAAAGTTTCTAAAGCTTATCTTAAAAAAGTTAATTCAGATTCCATTGAA AAATTACAGGAAGATACTGCAATTGGATTAATCGAATTGGTAACTAACCAACTTAATAAA CAGACAGAGAAAGCGGGTAAGTAATTATGCGACAGATAACTATATCTGGAAATATTGGCA ATGATGTACAAGTTAACTCAACTCAAAGTGGAAACAAAGTGGCTAACTTTAATGTGGCTG TACGACAGAATCGACCTGATAATAACGGGGAATACGGTGCTGACTGGTTTAGATGCTCAG TATGGGGAACGAGAGCTAGTACAGTAGAAAAATTCTACAAAAAGGGTAGTCATGTAGTAG TAACTGGAAGTTTATCAATCAATGAATATAACGGTAAAACACAGCTTCAAATTGACGTTT CAGACTTTGATTTACCAGATAACCGCAATACAAACAATGCTAATTCAACAAAGAAAAATA GCAATAATCCATTTAACAATGGCGGACAATCAATCGATATTTCAGATGATCAGCTTCCCT TCTAAGGTGATGTAAATGCAGAGAGCAAGAGCGGAACAACGAGGCAAAGATTTAATAATT CATCTCGATAGACCACTAAATCAAGATCATTTGGAGACAGTAAGCAGTGGGCAAGGCGAG TTCTACGTTGATTTTGAAGTAGCAGACCCAAGGAGAGCAAGAGTACAGCAACGAAGATTA TTCTTTGCATTGCTCCATGACATTGAAACTTACTTCGTAGTGCCGAGTGAATTTTTAAAA TCAATGTTCTATACCCAGTACGAGTTTTATACCGCAGGTAAGTCTATCAGTTTATCAGAC GCCACAGAATCGTCTGTTAGCGATGCTAATCAATTGTTAGACCTAGTTATCGATTTCATG TTCGAATGGCGTGTTCCATTTAAGAAAGGGTATGAACTATTACCAAAAGAAGAGGGCTAC TACCTTTATCAATGCTGTAGACACCGAGTTTGTACGATTTGTTCTAAGTATGCTGATATC CATCATATTGATGTTGTTGGCAGGACAAATAGAAACAAAGTCGACCATACAAAGCGTCAT GTAATGGCATTATGTAGAGTCCATCATAATGAAATTGAATCAATTGGGGCGATTAAATTT GCACAGAAATATCACGTACCAGTTACTGGTATTAAGTTAAAAATTGAAGATTTACAAAAG TTAGGAATAAGAGGGAACTATGGAGGTGATTAATTGGCACAAAGAAGAATGTTCAGCAAG AAAATAACAGATACGGATATATTTTTGGATATGCCACTATCATCGCAAGCATTGTACTTC CATTTAAATATGCACGCTGATGACGATGGCTTTGTATCGAATGCCAAAACAGTTAAGAGA ATGATTGGGTCTAGTGATGACGATTTAAAACTACTCTTAACTAAGAATTTTATATTTGCG TTTGAATCTGGTGTGGTAGTAATTAAGGATTGGAAAATTCACAATTATATCCGCAAAGAT ACCTACAATACAACAATTTATGGCGATGAAAAAGAGCAATTATCTCAAGATGAAAATGGT TCGTATACGCTAAGTCCACGTGCCGTCGACGAACCGTCACCACAGGTTAGGTTAGGTAAG GTTAGGTTAGGTAAGGATAGTAATATATATAGTTCATCTAACGATGAACCACATATCGAC TTGAAAACATTTAAAGAGATTATTAGCTACCTGAACGAAAAAGCAGGGACTAAGTACCGA GCTAGTGGATCTAAAACACAACGATTAATTAAAGCAAGATTTAATGATGGCTTTAATGAT GAAGATTTCAAGAAAGTAATCAATATTAAAGTAGCTGAATGGAGTGGTACAGATATGGCT AAATATTTGAGACCAGAAACTCTGTTTGGTACTAAATTTGAAAGCTACTTAAACCAAGAA GTTAAGAAAAGCAAAACAAATAAAGGCGGTGATTCGTATGGAGGACTTGAGTTTTAATCT TTTAAATCAAGCTAATTCAACTGATGAATATTGTAAAATCCACCCTGATCAGAAACTAGT AAGAGTAGGTAATGAGCATAATGCCTTTTGTACATTATGTGTTAAAGAACAACGGGAAAA GCATTTAAACGACTTAGTGCTCAAAGGGGTACTTAGCAACTACCATCGGGGATTTAGGGA CGTTTTGAGAAAAGATTCAATCGTAGATGATGAAGACCTATGGCAAGCAAGTTTTGAAAA CTACGAGGTTGAAACTGGCAGTGAAGCGGAAGTTAATTTAAAAAAGGCTAAGCAGATTGC AGGCAAATACCTTAACCGTGATTACCAAGCTAATACCATCATTACTGGTAACCCCGGAGT TGGTAAGTCGCACTTAGCAATTTCGATGTTAAAAGGTGTTAATGATCATATTAAGCCTAA CGCTTCATGCTTGTTTGTTTCAGTCAATGAACTGTTGCGATTGATTAAGGATTCATTTAA TCATCCTGATAGCTATTACACTGAATCTCGCATGGTGGACTTGCTCGGTAAGGTTAGCTT GCTTGTGTTGGACGATTTGGGCAGTGAGGCTTCGTTTAAGCGTGACAACAGAGAAGCAAG TGAATATGTACAGCAAGTATTGTTTGGCGTCTTAAACAAGCGAAATAGGACGATTATAAC CACAAATCTTAATAGCGATGAATTATCTAAGATTTATAATCCAAAATTGTTAAGTCGAAT GTATAAAGGCGTTATGAAAAACGATGGAATTATTAAATTTAAAGAAACTCAAGATAAAAG GATGGCGATATTTTAATGTGTGAAATATGTGAAGGGACTGGAAGAGTTTATGTTGAAAGC CCAATTGGAGTACAAGTTAATCCGTGCCCTAAATGTAATACGGCTTACCGCAAGAGAAAA GGATACGAGTAATGATTAAATTAACAATTCCAAGCGAACCAATAGCACAAGGGCGTCCAA GATTTGTTAGTCGAGGAAAGTTTGTAAGCACGTATGATCCACCTAAATCAAAAGCGTACA AGGAACTAGTAGCACAATATGCTAGAGAACAGTACCACGGTAAGCTTTTAGAGGGTCAGC TGTATATTGTGTTAAATGTATTTAGATCAGTACAAAAGAGCATATCAAAAGCAGAACGTG CTAGGAGGCTATCAGGAGTTCATAGACCGACTGTAAAACCAGATATAGATAATTACTTTA AAGCAGTGACAGATGCTTGCACGGGGATTATATGGAGAGATGACGCCTTAATAACAGATG TTAAGATGGGAAAATTCTATTCAGAAGAACCACGAGTAGAAATTTATGTGGAGGAGCTAT GCATTTTAAAAATTTAACTAGTGAAGAACGCATTGTGGCTAATTTTATTAACAAAGCTTT TGAAGAACGCAATCAAAACATGATAAGCACTATTGTTTGGATCAATAACCACACTAACTA TTTAGTTAATCAGCGTCCAGACGTACATAGAGCGATGAACAATTTAACAAATAAGCAATT TAATCATGTGATCTCAGAAATATTATTACCATTTTAGAGGAATTAAGGAGGTCAATAATC ATATGAAAAGACTTACAGAAATGACAACAGAGGATATTATCCGTGAATTGTACGGCAATG ATTATACTTTGCAAGAATTAGATCGGATTAAAGAAGCACTTGAAGAACAGTATCAAGAAT GGCGTAAACGCAATTTTAACTAGGGGGAACGAAAATAATGTACGTAATCGAGAATACAGC CAATGGAAGATATTACCGAAAGTTAGGAGCAGAAACACACCAGTACACCGATATTGGGCA TGCTACTCCTTTTGGCAAGTGGAAAAAGGCAAAACAAAAGGCAGACATTTTACACGCTGC GATTAGTCCAATTGGTGAACAAATTAATTTTGAGGTAAAACAGCACAAGTTTTACGTGTT GAAGAATCAAAATGATAAAGGGTACATGAATCAAGTGTCGTGGAATGCACCGAAAGAGGA AGCCAAAATGTTTGCTAGTGAAGAAGACGCTAAGCGTGAAGCAAATGATCTAGCTACCGC TATGGCAAGAGTTGGTGTCGAACTTAGCTTTAAAGTGGAAGAAATCTAGTATAGCGTTAA AAAAACAACGTTTGTATAAAATCTACATTTTATTAAGGAGAAGTTATGAACAAACATTTA AGAGATTTTATAATTTGTGCATTAATTTTTACTATTATGACAATTCTTTTTAAGTGGGGA TATGGGGAAATAAACACGTTCCCACAATGGGTTATTTTCTCCATTTCATATATAGGAACG AGCGTAGGAGTTAGCCTTACTACCGATATATTTAGCGGAAGAAATTAAAAGAAAGCAGGT ATCAACGATGTTTAGGTTAATTGGAAATGTGTCTAAGAAAGTATACTACGAAGCAGAAAA TGCTTCTGATTTGAATAAGTGGCGATTAGATAACTTTACCAGAGGTTCTCAAGTAGAGGG ACATACGGTCAGCAAATATGACGCTCCAGAAGCCATGGTGATTGTGAAAGTTAAGACTAT CAAGTCAAAAAAAGAATACTTGAATGATTTATTGGATCAAGGCAAGTTTGAAGAATATCG CAAAATAACCATGGGAACTTCCAATCGTGATATTGAAGTGTATGGAAGTGGTAAAGATAT ACCAGAAATTATTAATCGTCGCAAAAAGATTGAGAAGCTATTCAGGCAGGGAGTCACAAA TACCGCTGAAATTGCAGGTGAGGTACAAGCTTCAAGAAACACGGTGAATTATGACCTTAG GGAATTACGTAAGACTTATCCAGAGCTAAGACAAAAAAGAGCTAGATCATGAGGAGGAAC TATAATGATTGTAACTATTAACGAAGATTATCAAGTAAAGGTAGATAACTATGCTAACTA CACCTTGCTCAAGGCTGTAAGAGATGAATCTGGAGCGATTAAGACTGACAAGCATAATTT ACCTATGCTCACTGTAAAAGGCTACTACTCGAATTTAAGTCGTGCTTTGAACGCTTGTAT TCATCTAATGTTGGAAGATAAGCATGATGTGATGGAATTGACACAATATCTTGATGAGTT GGAACGGTTAGAAGCTAAGTTTCGTCCAGTGATGAAACGGTTCAGGGAGGGCGACTAGAT GAGTAAATTTAGAGTATGAATAAAAACAGGCGCCAGAGTGGGTACAGTAGTTTAAACCAG AGGAGGCAGAAGATGAATAAGGCTGAAAAGCAATTTAATAAATGGTGGTTTGAACGTTTT GATAGTAAGAAATATAAAATTATTAAACTATTTTTTAAAGGTGAAAAGATTCAAGAATAT ACAACAGCTAATAAAAAATATAGTGAT
Region Details
| Region | 1 |
| Region Length | 20.2Kb |
| Completeness(score) | incomplete(20) |
| Specific Keyword | integrase |
| Region Position | 168132-188378 |
| # tRNA | 0 |
| # Total Proteins | 25 |
| # Phage Hit Proteins | 16 |
| # Hypothetical Proteins | 8 |
| Phage + Hypothetical Protein % | 96% |
| # Bacterial Proteins | 1 |
| Attachment Site | yes |
| # Phage Species | 14 |
| Most Common Phage Name(hit genes count) | PHAGE_Lactob_LBR48_NC_027990(3) PHAGE_Lactob_phig1e_NC_004305(3) PHAGE_Lactoc_BK5_T_NC_002796(2) PHAGE_Lactoc_bIL285_NC_002666(2) PHAGE_Lactob_phiadh_NC_000896(2) PHAGE_Lactob_phiAQ113_NC_019782(2) PHAGE_Lactoc_P1045_NC_049812(2) PHAGE_Bacill_vB_BceS_MY192_NC_048633(1) PHAGE_Strept_APCM01_NC_029030(1) PHAGE_Lactob_LL_H_NC_009554(1) PHAGE_Lactob_JCL1032_NC_019456(1) PHAGE_Entero_vB_IME197_NC_028671(1) PHAGE_Staphy_phi5967PVL_NC_019921(1) PHAGE_Staphy_X2_NC_007065(1) PHAGE_Entero_phiFL2A_NC_013643(1) PHAGE_Staphy_YMC/09/04/R1988_NC_022758(1) PHAGE_Strept_phiARI0746_NC_031907(1) PHAGE_Clostr_phiCD27_NC_011398(1) PHAGE_Staphy_phiMR25_NC_010808(1) PHAGE_Lactob_LpeD_NC_048677(1) PHAGE_Lactob_Sha1_NC_019489(1) PHAGE_Staphy_SA13_NC_021863(1) PHAGE_Strept_M102_NC_012884(1) PHAGE_Lactob_iLp1308_NC_028911(1) PHAGE_Lactoc_TP901_1_NC_002747(1) PHAGE_Staphy_47_NC_007054(1) PHAGE_Lactob_Lj965_NC_005355(1) PHAGE_Entero_phiFL1A_NC_013646(1) PHAGE_Lactob_CL1_NC_028888(1) PHAGE_Staphy_phi2958PVL_NC_011344(1) PHAGE_Staphy_tp310_2_NC_009762(1) PHAGE_Sulfit_NYA_2014a_NC_027299(1) PHAGE_Bacill_PBC1_NC_017976(1) PHAGE_Staphy_phiETA2_NC_008798(1) PHAGE_Lactob_iA2_NC_028830(1) PHAGE_Bacill_BM5_NC_029069(1) PHAGE_Lactob_Lv_1_NC_011801(1) PHAGE_Strept_MM1_NC_003050(1) PHAGE_Strept_phiARI0923_NC_030946(1) PHAGE_Lactob_PLE2_NC_031036(1) PHAGE_Staphy_StB20_like_NC_028821(1) PHAGE_Staphy_Ipla5_NC_018281(1) PHAGE_Lactob_LF1_NC_019486(1) PHAGE_Entero_phiFL3A_NC_013648(1) PHAGE_Lactob_Lb_NC_047983(1) PHAGE_Lactob_Lc_Nu_NC_007501(1) PHAGE_Staphy_StB20_NC_019915(1) PHAGE_Entero_phiEf11_NC_013696(1) PHAGE_Staphy_37_NC_007055(1) PHAGE_Staphy_phi7247PVL_NC_048624(1) PHAGE_Strept_phiARI0468_2_NC_031923(1) PHAGE_Lactoc_50101_NC_031040(1) PHAGE_Lactoc_50902_NC_049810(1) PHAGE_Thermu_OH2_NC_021784(1) PHAGE_Lactoc_lato_NC_004746(1) PHAGE_Staphy_Phi12_NC_004616(1) PHAGE_Lactoc_98201_NC_031064(1) PHAGE_Strept_M102AD_NC_028984(1) PHAGE_Staphy_88_NC_007063(1) |
| First Most Common Phage # | 3 |
| First Most Common Phage % | 12% |
| GC % | 34.28% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|WEOQ01000004.1| Pediococcus pentosaceus strain FAM18813 FAM18813_scf0004, whole 188608, gc%: 35.71%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 27 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 168132..168147 | attL | 0.0 | Showinfo_outline |
| 2 | complement(174535..175608) | PHAGE_Lactoc_BK5_T_NC_002796: integrase; GBP22_07870; phage(gi14251156) | 5.66e-48 | Showinfo_outline |
| 3 | complement(175974..176834) | hypothetical protein; GBP22_07875 | 0.0 | Showinfo_outline |
| 4 | complement(176941..177138) | hypothetical protein; GBP22_07880 | 0.0 | Showinfo_outline |
| 5 | complement(177374..177907) | PHAGE_Lactoc_TP901_1_NC_002747: ORF2; GBP22_07885; phage(gi13786533) | 7.95e-44 | Showinfo_outline |
| 6 | complement(177970..178377) | PHAGE_Lactob_LF1_NC_019486: Lj965 prophage repressor-like protein; GBP22_07890; phage(gi418489418) | 1.86e-26 | Showinfo_outline |
| 7 | complement(178386..178730) | PHAGE_Entero_phiFL1A_NC_013646: CI phage repressor protein; GBP22_07895; phage(gi281416326) | 3.93e-28 | Showinfo_outline |
| 8 | 178995..179183 | PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; GBP22_07900; phage(gi9633012) | 1.38e-07 | Showinfo_outline |
| 9 | 179209..179436 | PHAGE_Bacill_BM5_NC_029069: hypothetical protein; GBP22_07905; phage(gi985757870) | 9.71e-15 | Showinfo_outline |
| 10 | 179462..180268 | PHAGE_Staphy_47_NC_007054: ORF017; GBP22_07910; phage(gi66395673) | 8.08e-81 | Showinfo_outline |
| 11 | 180314..180514 | PHAGE_Staphy_StB20_like_NC_028821: hypothetical protein; GBP22_07915; phage(gi971746515) | 2.65e-07 | Showinfo_outline |
| 12 | complement(180539..180760) | hypothetical protein; GBP22_07920 | 0.0 | Showinfo_outline |
| 13 | 181087..181296 | hypothetical protein; GBP22_07925 | 0.0 | Showinfo_outline |
| 14 | 181394..181651 | hypothetical protein; GBP22_07930 | 0.0 | Showinfo_outline |
| 15 | complement(181608..181874) | hypothetical protein; GBP22_07935 | 0.0 | Showinfo_outline |
| 16 | 182101..182562 | PHAGE_Lactob_phig1e_NC_004305: hypothetical protein; GBP22_07940; phage(gi254854755) | 1.41e-05 | Showinfo_outline |
| 17 | 182559..183215 | PHAGE_Staphy_37_NC_007055: ORF018; GBP22_07945; phage(gi66395747) | 9.06e-26 | Showinfo_outline |
| 18 | 183218..183616 | PHAGE_Lactob_LBR48_NC_027990: putative single strand binding protein; GBP22_07950; phage(gi937456721) | 4.80e-49 | Showinfo_outline |
| 19 | 183627..184304 | PHAGE_Lactob_phig1e_NC_004305: hypothetical protein; GBP22_07955; phage(gi23455785) | 1.69e-97 | Showinfo_outline |
| 20 | 184305..185048 | PHAGE_Strept_M102_NC_012884: hypothetical protein; GBP22_07960; phage(gi242345592) | 1.31e-89 | Showinfo_outline |
| 21 | 185029..185847 | PHAGE_Lactob_phig1e_NC_004305: zinc finger protein; GBP22_07965; phage(gi23455786) | 4.40e-69 | Showinfo_outline |
| 22 | 185963..186388 | PHAGE_Lactob_Lc_Nu_NC_007501: putative Holliday junction resolvase; GBP22_07970; phage(gi78000012) | 6.32e-55 | Showinfo_outline |
| 23 | 186370..186588 | hypothetical protein; GBP22_07975 | 0.0 | Showinfo_outline |
| 24 | 186769..187140 | N-acetylmuramoyl-L-alanine amidase; GBP22_07980 | 0.0 | Showinfo_outline |
| 25 | 187399..187863 | hypothetical protein; GBP22_07985 | 0.0 | Showinfo_outline |
| 26 | 187876..188169 | PHAGE_Lactob_LpeD_NC_048677: hypothetical protein; GBP22_07990; phage(gi100084) | 3.89e-07 | Showinfo_outline |
| 27 | 188378..188393 | attR | 0.0 | Showinfo_outline |
Sequence
>168132..168147
TGAAGAAGATGCTAAA
Sequence
>complement(174535..175608)
PediococcuspentosaceusMASFEKRGKRTRVVVSVMQSGVRRKVSKTFDTKKKAKDWAIMMEADKLQNRSIIASSMTFADYFKMWMETYKKNDIRPSTYNTYISTLRHIKESFDGITLENLTYSLLQSRLDTIGKTLSKGTMTLIVSRIKACLKDALYDKYILDDIFTRLKPHGIERSEKTNALSVTEFEKLQDYLYHSKLDKASLAILVALETGMRIGEVLALQYKDVSIPFNNIHVSKSRSGNIVGKPKNKNSVRDIKITNELANIINNEKNNSTEFIFNCRRQTVRNRLDSLINKLDLQPITIHGLRHSHASYLLYKGVSINYVSARLGHANTSITQKVYAHMLKEEKTREQDKTIEILSVSPNVPKAINKC
Sequence
>complement(175974..176834)
PediococcuspentosaceusMDNSEQSDYKEIIYLDQIELDSALAQLEKGLKESIVNGDVSTQQAGESTTIKGNMSGTLDGIFAKGTATMESEIASNESNSEGISKTINVVLNDYKIERLIKILDKTESITVRNSALESQDGEFILLQSEFRLTDFELFLNMITSKGIKKLMQTIPAENGNPTWNKGIENGFKLSANVAEMGKTLFQNNILISAKDSISYAERKNFRMNSGQLQLLSGTNRSIFILGIVESKLGTKKNDIDEVTQSLDLGLQELGNITSSLSELVLTSMGFAKENDRLIKPIAIYF
Sequence
>complement(176941..177138)
PediococcuspentosaceusMETSIMAIIGIIIFFIGALIITLGRTLNILRFFFGDRSMFTQMFWGIIFICIGLFLIILDSPQLR
Sequence
>complement(177374..177907)
PediococcuspentosaceusMELQEVKKQLSAANVSDTFGTKKEIKALPEILNDDEVIQYATSGFVDGNTVLIVLTQKRILFIDKGLLYGIKSTEIPLDMVNGVSYSKGLLLGKISITNGAITTLIEQVNKDTAPIMVSKIKDSAERYKASLLSNSNTPAEPTLDGPDQIRKYKSLLDDGIITQEEFAAKKKQILGL
Sequence
>complement(177970..178377)
PediococcuspentosaceusMDDLMTFLRDYAFANQIGYQFDSIREPDQAPKSNTALRVVFMNNNWKNPEEIPFQFAHEISHILNGDKGSNNFSANSVYSKEEYKANKRATKILLEYCDLNGLTFYNSTEFMDAFGIPSKTGYVVDNVFEEKIGI
Sequence
>complement(178386..178730)
PediococcuspentosaceusMTMFDRVKEISKKRGLSLAQLNEKAGFKQNVIYSWKTKTPSIDKVESVAKVLGVSVDYLLGKTEKEEPVNDTRDMEVEEALNSIRSYQGQPISDEEREVMRGIIKGYLDNKNKK
Sequence
>178995..179183
PediococcuspentosaceusMIGTEPGREAVKKYMKENHITYRMAGVLFGPSASWIQQVLNGKAKGPEATKLIISMINEFGI
Sequence
>179209..179436
PediococcuspentosaceusMIYRKLKGWLVSNNISQKRVGEIIGTTANVVNKKLNGTGSDFKLSEARALHNKLKVPTDCFFEIEVPLSEQKETC
Sequence
>179462..180268
PediococcuspentosaceusMNELQNFNFEGNEVRTVLINDEPYFVGKDIADVLGYLNTRDALSKHVDEEDKNSVAIHDGNKGNPNQVVINESGMYSLVLSSKLPNAKKFKRWVTNEVLPSIRKHGAYLTDEKIEEALLNPDTIISLATKLKNEREKVEVERNGRLIAEQRVEELQPKADYYDQILSNKGVVTVTSIAKNYGMTAPELNKLLNRLGVQYSQSGSWYLYKKYQKNGYTHTIPVPYSHRDGRPDIKPQTKWTQKGHIFIYQLLKEHGILPMIEMKDASAV
Sequence
>180314..180514
PediococcuspentosaceusMNIQEAVKQSLKTGKQFYRKSEGDQLTFEVSKSNRCIDIYRNGEKISGWWNPRDNDLMANDWKIKE
Sequence
>complement(180539..180760)
PediococcuspentosaceusMNSNEKLLNTIIELADDSRPTNIDPSKVRKASTLSDMDFAQSLLSLEGSGFIELQFGSDLLTDILISTKVPTK
Sequence
>181087..181296
PediococcuspentosaceusMTVNKNRLSDDKYPMLMDKKTVAEYLGVSKSSVDVFLLNDNLSTAAFEPSKLKRNFFIKTKVNKWLEEL
Sequence
>181394..181651
PediococcuspentosaceusMKLVRISDDTILDVDDVQFAIWDDEDQKVKIEFKSTNTYLYTKDKKALDAICGSEEHLVNDASMNILKAESINSGHLNQQKYPSR
Sequence
>complement(181608..181874)
PediococcuspentosaceusMQLSNEQIMKLIDKHMDAAWTEESIKAEMKYVASNIQNSSDTQLNQEQINALANSLQYINKITTKQTLITLFNVFTEMGIFVDSNDQN
Sequence
>182101..182562
PediococcuspentosaceusMNNIDELEVERTKLDRKLRGLKNRKAEIVLSIEEVQDEINKISQKELQMFDGRECQTESFKYVRTASNPSKPSWWQVVKTDNAKPKEVVQVLADIDVNLIKREPDVSAIKRYVAEGRFIVREGGQLIDTETGMVLPYRAKRKADKLTVKAVES
Sequence
>182559..183215
PediococcuspentosaceusMSEKTLYQKLQNIHKKVPYIQKSQQASQYSYAGSSDVLGAIHGLMDEEKLILIPQITNKNTETSQNRKGSTVIFTELMMTMTWVNSDNPDEKLECQWYAQGIDTAGEKGVGKALTYGEKYFLLKFFNVATDDLDPDAFQENVKAQKTPELINDEQKKTLKELFNSMASVTKTPIEKVSKAYLKKVNSDSIEKLQEDTAIGLIELVTNQLNKQTEKAGK
Sequence
>183218..183616
PediococcuspentosaceusMRQITISGNIGNDVQVNSTQSGNKVANFNVAVRQNRPDNNGEYGADWFRCSVWGTRASTVEKFYKKGSHVVVTGSLSINEYNGKTQLQIDVSDFDLPDNRNTNNANSTKKNSNNPFNNGGQSIDISDDQLPF
Sequence
>183627..184304
PediococcuspentosaceusMQRARAEQRGKDLIIHLDRPLNQDHLETVSSGQGEFYVDFEVADPRRARVQQRRLFFALLHDIETYFVVPSEFLKSMFYTQYEFYTAGKSISLSDATESSVSDANQLLDLVIDFMFEWRVPFKKGYELLPKEEGYYLYQCCRHRVCTICSKYADIHHIDVVGRTNRNKVDHTKRHVMALCRVHHNEIESIGAIKFAQKYHVPVTGIKLKIEDLQKLGIRGNYGGD
Sequence
>184305..185048
PediococcuspentosaceusMAQRRMFSKKITDTDIFLDMPLSSQALYFHLNMHADDDGFVSNAKTVKRMIGSSDDDLKLLLTKNFIFAFESGVVVIKDWKIHNYIRKDTYNTTIYGDEKEQLSQDENGSYTLSPRAVDEPSPQVRLGKVRLGKDSNIYSSSNDEPHIDLKTFKEIISYLNEKAGTKYRASGSKTQRLIKARFNDGFNDEDFKKVINIKVAEWSGTDMAKYLRPETLFGTKFESYLNQEVKKSKTNKGGDSYGGLEF
Sequence
>185029..185847
PediococcuspentosaceusMEDLSFNLLNQANSTDEYCKIHPDQKLVRVGNEHNAFCTLCVKEQREKHLNDLVLKGVLSNYHRGFRDVLRKDSIVDDEDLWQASFENYEVETGSEAEVNLKKAKQIAGKYLNRDYQANTIITGNPGVGKSHLAISMLKGVNDHIKPNASCLFVSVNELLRLIKDSFNHPDSYYTESRMVDLLGKVSLLVLDDLGSEASFKRDNREASEYVQQVLFGVLNKRNRTIITTNLNSDELSKIYNPKLLSRMYKGVMKNDGIIKFKETQDKRMAIF
Sequence
>185963..186388
PediococcuspentosaceusMIKLTIPSEPIAQGRPRFVSRGKFVSTYDPPKSKAYKELVAQYAREQYHGKLLEGQLYIVLNVFRSVQKSISKAERARRLSGVHRPTVKPDIDNYFKAVTDACTGIIWRDDALITDVKMGKFYSEEPRVEIYVEELCILKI
Sequence
>186370..186588
PediococcuspentosaceusMHFKNLTSEERIVANFINKAFEERNQNMISTIVWINNHTNYLVNQRPDVHRAMNNLTNKQFNHVISEILLPF
Sequence
>186769..187140
PediococcuspentosaceusMYVIENTANGRYYRKLGAETHQYTDIGHATPFGKWKKAKQKADILHAAISPIGEQINFEVKQHKFYVLKNQNDKGYMNQVSWNAPKEEAKMFASEEDAKREANDLATAMARVGVELSFKVEEI
Sequence
>187399..187863
PediococcuspentosaceusMFRLIGNVSKKVYYEAENASDLNKWRLDNFTRGSQVEGHTVSKYDAPEAMVIVKVKTIKSKKEYLNDLLDQGKFEEYRKITMGTSNRDIEVYGSGKDIPEIINRRKKIEKLFRQGVTNTAEIAGEVQASRNTVNYDLRELRKTYPELRQKRARS
Sequence
>187876..188169
PediococcuspentosaceusMIVTINEDYQVKVDNYANYTLLKAVRDESGAIKTDKHNLPMLTVKGYYSNLSRALNACIHLMLEDKHDVMELTQYLDELERLEAKFRPVMKRFREGD
Sequence
>188378..188393
TGAAGAAGATGCTAAA
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
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Questionable (score 70-90)
Incomplete (score < 70)
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Length: 188608 bps
Phages: 1
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Locus 1: attL (Region 1)
Locus: attLORF Start: 168132
ORF Stop: 168147
Strand: Forward
Protein Sequence: TGAAGAAGATGCTAAA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: GBP22_07870 (Region 1)
Locus: GBP22_07870ORF Start: 174535
ORF Stop: 175608
Strand: Backward
Protein Sequence: MASFEKRGKRTRVVVSVMQSGVRRKVSKTFDTKKKAKDWAIMMEADKLQNRSIIASSMTFADYFKMWMETYKKNDIRPSTYNTYISTLRHIKESFDGITLENLTYSLLQSRLDTIGKTLSKGTMTLIVSRIKACLKDALYDKYILDDIFTRLKPHGIERSEKTNALSVTEFEKLQDYLYHSKLDKASLAILVALETGMRIGEVLALQYKDVSIPFNNIHVSKSRSGNIVGKPKNKNSVRDIKITNELANIINNEKNNSTEFIFNCRRQTVRNRLDSLINKLDLQPITIHGLRHSHASYLLYKGVSINYVSARLGHANTSITQKVYAHMLKEEKTREQDKTIEILSVSPNVPKAINKC
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: GBP22_07870, integrase, phage(gi14251156), PHAGE_Lactoc_BK5_T_NC_002796
Homolog/Ortholog E-Value: 5.66e-48
Locus 3: GBP22_07875 (Region 1)
Locus: GBP22_07875ORF Start: 175974
ORF Stop: 176834
Strand: Backward
Protein Sequence: MDNSEQSDYKEIIYLDQIELDSALAQLEKGLKESIVNGDVSTQQAGESTTIKGNMSGTLDGIFAKGTATMESEIASNESNSEGISKTINVVLNDYKIERLIKILDKTESITVRNSALESQDGEFILLQSEFRLTDFELFLNMITSKGIKKLMQTIPAENGNPTWNKGIENGFKLSANVAEMGKTLFQNNILISAKDSISYAERKNFRMNSGQLQLLSGTNRSIFILGIVESKLGTKKNDIDEVTQSLDLGLQELGNITSSLSELVLTSMGFAKENDRLIKPIAIYF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07875, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: GBP22_07880 (Region 1)
Locus: GBP22_07880ORF Start: 176941
ORF Stop: 177138
Strand: Backward
Protein Sequence: METSIMAIIGIIIFFIGALIITLGRTLNILRFFFGDRSMFTQMFWGIIFICIGLFLIILDSPQLR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07880, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 5: GBP22_07885 (Region 1)
Locus: GBP22_07885ORF Start: 177374
ORF Stop: 177907
Strand: Backward
Protein Sequence: MELQEVKKQLSAANVSDTFGTKKEIKALPEILNDDEVIQYATSGFVDGNTVLIVLTQKRILFIDKGLLYGIKSTEIPLDMVNGVSYSKGLLLGKISITNGAITTLIEQVNKDTAPIMVSKIKDSAERYKASLLSNSNTPAEPTLDGPDQIRKYKSLLDDGIITQEEFAAKKKQILGL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GBP22_07885, ORF2, phage(gi13786533), PHAGE_Lactoc_TP901_1_NC_002747
Homolog/Ortholog E-Value: 7.95e-44
Locus 6: GBP22_07890 (Region 1)
Locus: GBP22_07890ORF Start: 177970
ORF Stop: 178377
Strand: Backward
Protein Sequence: MDDLMTFLRDYAFANQIGYQFDSIREPDQAPKSNTALRVVFMNNNWKNPEEIPFQFAHEISHILNGDKGSNNFSANSVYSKEEYKANKRATKILLEYCDLNGLTFYNSTEFMDAFGIPSKTGYVVDNVFEEKIGI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GBP22_07890, Lj965 prophage repressor-like protein, phage(gi418489418), PHAGE_Lactob_LF1_NC_019486
Homolog/Ortholog E-Value: 1.86e-26
Locus 7: GBP22_07895 (Region 1)
Locus: GBP22_07895ORF Start: 178386
ORF Stop: 178730
Strand: Backward
Protein Sequence: MTMFDRVKEISKKRGLSLAQLNEKAGFKQNVIYSWKTKTPSIDKVESVAKVLGVSVDYLLGKTEKEEPVNDTRDMEVEEALNSIRSYQGQPISDEEREVMRGIIKGYLDNKNKK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GBP22_07895, CI phage repressor protein, phage(gi281416326), PHAGE_Entero_phiFL1A_NC_013646
Homolog/Ortholog E-Value: 3.93e-28
Locus 8: GBP22_07900 (Region 1)
Locus: GBP22_07900ORF Start: 178995
ORF Stop: 179183
Strand: Forward
Protein Sequence: MIGTEPGREAVKKYMKENHITYRMAGVLFGPSASWIQQVLNGKAKGPEATKLIISMINEFGI
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07900, hypothetical protein, phage(gi9633012), PHAGE_Lactob_phiadh_NC_000896
Homolog/Ortholog E-Value: 1.38e-07
Locus 9: GBP22_07905 (Region 1)
Locus: GBP22_07905ORF Start: 179209
ORF Stop: 179436
Strand: Forward
Protein Sequence: MIYRKLKGWLVSNNISQKRVGEIIGTTANVVNKKLNGTGSDFKLSEARALHNKLKVPTDCFFEIEVPLSEQKETC
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07905, hypothetical protein, phage(gi985757870), PHAGE_Bacill_BM5_NC_029069
Homolog/Ortholog E-Value: 9.71e-15
Locus 10: GBP22_07910 (Region 1)
Locus: GBP22_07910ORF Start: 179462
ORF Stop: 180268
Strand: Forward
Protein Sequence: MNELQNFNFEGNEVRTVLINDEPYFVGKDIADVLGYLNTRDALSKHVDEEDKNSVAIHDGNKGNPNQVVINESGMYSLVLSSKLPNAKKFKRWVTNEVLPSIRKHGAYLTDEKIEEALLNPDTIISLATKLKNEREKVEVERNGRLIAEQRVEELQPKADYYDQILSNKGVVTVTSIAKNYGMTAPELNKLLNRLGVQYSQSGSWYLYKKYQKNGYTHTIPVPYSHRDGRPDIKPQTKWTQKGHIFIYQLLKEHGILPMIEMKDASAV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GBP22_07910, ORF017, phage(gi66395673), PHAGE_Staphy_47_NC_007054
Homolog/Ortholog E-Value: 8.08e-81
Locus 11: GBP22_07915 (Region 1)
Locus: GBP22_07915ORF Start: 180314
ORF Stop: 180514
Strand: Forward
Protein Sequence: MNIQEAVKQSLKTGKQFYRKSEGDQLTFEVSKSNRCIDIYRNGEKISGWWNPRDNDLMANDWKIKE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07915, hypothetical protein, phage(gi971746515), PHAGE_Staphy_StB20_like_NC_028821
Homolog/Ortholog E-Value: 2.65e-07
Locus 12: GBP22_07920 (Region 1)
Locus: GBP22_07920ORF Start: 180539
ORF Stop: 180760
Strand: Backward
Protein Sequence: MNSNEKLLNTIIELADDSRPTNIDPSKVRKASTLSDMDFAQSLLSLEGSGFIELQFGSDLLTDILISTKVPTK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07920, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 13: GBP22_07925 (Region 1)
Locus: GBP22_07925ORF Start: 181087
ORF Stop: 181296
Strand: Forward
Protein Sequence: MTVNKNRLSDDKYPMLMDKKTVAEYLGVSKSSVDVFLLNDNLSTAAFEPSKLKRNFFIKTKVNKWLEEL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07925, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 14: GBP22_07930 (Region 1)
Locus: GBP22_07930ORF Start: 181394
ORF Stop: 181651
Strand: Forward
Protein Sequence: MKLVRISDDTILDVDDVQFAIWDDEDQKVKIEFKSTNTYLYTKDKKALDAICGSEEHLVNDASMNILKAESINSGHLNQQKYPSR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07930, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 15: GBP22_07935 (Region 1)
Locus: GBP22_07935ORF Start: 181608
ORF Stop: 181874
Strand: Backward
Protein Sequence: MQLSNEQIMKLIDKHMDAAWTEESIKAEMKYVASNIQNSSDTQLNQEQINALANSLQYINKITTKQTLITLFNVFTEMGIFVDSNDQN
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07935, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 16: GBP22_07940 (Region 1)
Locus: GBP22_07940ORF Start: 182101
ORF Stop: 182562
Strand: Forward
Protein Sequence: MNNIDELEVERTKLDRKLRGLKNRKAEIVLSIEEVQDEINKISQKELQMFDGRECQTESFKYVRTASNPSKPSWWQVVKTDNAKPKEVVQVLADIDVNLIKREPDVSAIKRYVAEGRFIVREGGQLIDTETGMVLPYRAKRKADKLTVKAVES
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07940, hypothetical protein, phage(gi254854755), PHAGE_Lactob_phig1e_NC_004305
Homolog/Ortholog E-Value: 1.41e-05
Locus 17: GBP22_07945 (Region 1)
Locus: GBP22_07945ORF Start: 182559
ORF Stop: 183215
Strand: Forward
Protein Sequence: MSEKTLYQKLQNIHKKVPYIQKSQQASQYSYAGSSDVLGAIHGLMDEEKLILIPQITNKNTETSQNRKGSTVIFTELMMTMTWVNSDNPDEKLECQWYAQGIDTAGEKGVGKALTYGEKYFLLKFFNVATDDLDPDAFQENVKAQKTPELINDEQKKTLKELFNSMASVTKTPIEKVSKAYLKKVNSDSIEKLQEDTAIGLIELVTNQLNKQTEKAGK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GBP22_07945, ORF018, phage(gi66395747), PHAGE_Staphy_37_NC_007055
Homolog/Ortholog E-Value: 9.06e-26
Locus 18: GBP22_07950 (Region 1)
Locus: GBP22_07950ORF Start: 183218
ORF Stop: 183616
Strand: Forward
Protein Sequence: MRQITISGNIGNDVQVNSTQSGNKVANFNVAVRQNRPDNNGEYGADWFRCSVWGTRASTVEKFYKKGSHVVVTGSLSINEYNGKTQLQIDVSDFDLPDNRNTNNANSTKKNSNNPFNNGGQSIDISDDQLPF
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GBP22_07950, putative single strand binding protein, phage(gi937456721), PHAGE_Lactob_LBR48_NC_027990
Homolog/Ortholog E-Value: 4.80e-49
Locus 19: GBP22_07955 (Region 1)
Locus: GBP22_07955ORF Start: 183627
ORF Stop: 184304
Strand: Forward
Protein Sequence: MQRARAEQRGKDLIIHLDRPLNQDHLETVSSGQGEFYVDFEVADPRRARVQQRRLFFALLHDIETYFVVPSEFLKSMFYTQYEFYTAGKSISLSDATESSVSDANQLLDLVIDFMFEWRVPFKKGYELLPKEEGYYLYQCCRHRVCTICSKYADIHHIDVVGRTNRNKVDHTKRHVMALCRVHHNEIESIGAIKFAQKYHVPVTGIKLKIEDLQKLGIRGNYGGD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07955, hypothetical protein, phage(gi23455785), PHAGE_Lactob_phig1e_NC_004305
Homolog/Ortholog E-Value: 1.69e-97
Locus 20: GBP22_07960 (Region 1)
Locus: GBP22_07960ORF Start: 184305
ORF Stop: 185048
Strand: Forward
Protein Sequence: MAQRRMFSKKITDTDIFLDMPLSSQALYFHLNMHADDDGFVSNAKTVKRMIGSSDDDLKLLLTKNFIFAFESGVVVIKDWKIHNYIRKDTYNTTIYGDEKEQLSQDENGSYTLSPRAVDEPSPQVRLGKVRLGKDSNIYSSSNDEPHIDLKTFKEIISYLNEKAGTKYRASGSKTQRLIKARFNDGFNDEDFKKVINIKVAEWSGTDMAKYLRPETLFGTKFESYLNQEVKKSKTNKGGDSYGGLEF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07960, hypothetical protein, phage(gi242345592), PHAGE_Strept_M102_NC_012884
Homolog/Ortholog E-Value: 1.31e-89
Locus 21: GBP22_07965 (Region 1)
Locus: GBP22_07965ORF Start: 185029
ORF Stop: 185847
Strand: Forward
Protein Sequence: MEDLSFNLLNQANSTDEYCKIHPDQKLVRVGNEHNAFCTLCVKEQREKHLNDLVLKGVLSNYHRGFRDVLRKDSIVDDEDLWQASFENYEVETGSEAEVNLKKAKQIAGKYLNRDYQANTIITGNPGVGKSHLAISMLKGVNDHIKPNASCLFVSVNELLRLIKDSFNHPDSYYTESRMVDLLGKVSLLVLDDLGSEASFKRDNREASEYVQQVLFGVLNKRNRTIITTNLNSDELSKIYNPKLLSRMYKGVMKNDGIIKFKETQDKRMAIF
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GBP22_07965, zinc finger protein, phage(gi23455786), PHAGE_Lactob_phig1e_NC_004305
Homolog/Ortholog E-Value: 4.40e-69
Locus 22: GBP22_07970 (Region 1)
Locus: GBP22_07970ORF Start: 185963
ORF Stop: 186388
Strand: Forward
Protein Sequence: MIKLTIPSEPIAQGRPRFVSRGKFVSTYDPPKSKAYKELVAQYAREQYHGKLLEGQLYIVLNVFRSVQKSISKAERARRLSGVHRPTVKPDIDNYFKAVTDACTGIIWRDDALITDVKMGKFYSEEPRVEIYVEELCILKI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GBP22_07970, putative Holliday junction resolvase, phage(gi78000012), PHAGE_Lactob_Lc_Nu_NC_007501
Homolog/Ortholog E-Value: 6.32e-55
Locus 23: GBP22_07975 (Region 1)
Locus: GBP22_07975ORF Start: 186370
ORF Stop: 186588
Strand: Forward
Protein Sequence: MHFKNLTSEERIVANFINKAFEERNQNMISTIVWINNHTNYLVNQRPDVHRAMNNLTNKQFNHVISEILLPF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07975, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 24: GBP22_07980 (Region 1)
Locus: GBP22_07980ORF Start: 186769
ORF Stop: 187140
Strand: Forward
Protein Sequence: MYVIENTANGRYYRKLGAETHQYTDIGHATPFGKWKKAKQKADILHAAISPIGEQINFEVKQHKFYVLKNQNDKGYMNQVSWNAPKEEAKMFASEEDAKREANDLATAMARVGVELSFKVEEI
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: GBP22_07980, N-acetylmuramoyl-L-alanine amidase
Homolog/Ortholog E-Value: N/A
Locus 25: GBP22_07985 (Region 1)
Locus: GBP22_07985ORF Start: 187399
ORF Stop: 187863
Strand: Forward
Protein Sequence: MFRLIGNVSKKVYYEAENASDLNKWRLDNFTRGSQVEGHTVSKYDAPEAMVIVKVKTIKSKKEYLNDLLDQGKFEEYRKITMGTSNRDIEVYGSGKDIPEIINRRKKIEKLFRQGVTNTAEIAGEVQASRNTVNYDLRELRKTYPELRQKRARS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07985, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 26: GBP22_07990 (Region 1)
Locus: GBP22_07990ORF Start: 187876
ORF Stop: 188169
Strand: Forward
Protein Sequence: MIVTINEDYQVKVDNYANYTLLKAVRDESGAIKTDKHNLPMLTVKGYYSNLSRALNACIHLMLEDKHDVMELTQYLDELERLEAKFRPVMKRFREGD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GBP22_07990, hypothetical protein, phage(gi100084), PHAGE_Lactob_LpeD_NC_048677
Homolog/Ortholog E-Value: 3.89e-07
Locus 27: attR (Region 1)
Locus: attRORF Start: 188378
ORF Stop: 188393
Strand: Forward
Protein Sequence: TGAAGAAGATGCTAAA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download