Submission Results
Sequence Name: Not Available
GenBank Accession Number: WOUD01000035.1
GenInfo (GI) Number: 0000000000
Download Results: WOUD01000035.1.PHASTER.zip
gi|00000000|ref|WOUD01000035.1| Enterococcus avium strain APC2848 44678, gc%: 39.72%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 19.6Kb | incomplete | 60 | 33 | 876-20522 info_outline | PHAGE_Entero_phiEf11_NC_013696(3) | 38.59% | Show info_outline |
Region DNA
>1 876-20522 TGATTTGTTTTTTCCTATTAACGTGACCGGGATCGAACCGGCGACCTCCTGATTAAGGCG CTCTACCTCTGAGCTACACGTCTAAGTCACTGGCAAGGAATCGAACCTTGCTCATCGGGA ACGAGTCGTCACCTATCTATCCCTCAATAAGCTCCAACACCCTACGTTTTTAGCATTGGC TACTTATGCGTTAATCCTTCCGCCACAGTGACATAAAGACGGCACATGAACTTTAAAGTT GAGGAGCGTTTCTTCACATCCTCTTCTTTTATTTTTTGCGTGCCGCCATTAAATCCACCA AGCTAGACGTTTGTATGTTAAGAGTTATAAGGAGAAACTTCATGCCAACAAAGTTAAGTT TGAGTCGTCTGCTTGGCGGATTAATCACATTTATTTCACGCTATCATAGTAACACTTTTA ATGTACACTCGTGGCGCCACAAACGCGCCTTACAACCAATCAATTACAACATCCACTCCA AAGATAAATACTGATAGCTGTTCAACAGCTTTTTTTATCCACTTCCCTATCGTCCTTCGA TCAACAGCGTATTTCGAAGCAATGTATTCATCAGCAAAACACTTAGGTAGCAAGTACTTC ATGTTTAAAATATCATAGGCTCGCTCATCCTCTGCTTTTAGTTCAACTAAAGCCTTATCA ACATGTTTCATTAATTTTGCTGTTTTCGCCTTATGTTCTAGTAGACTATCTACATCAAAG CGCCAGTCATTCCACATTGAAGCGAAATCCTCTTCGACTTGCTCCTCTACTATTTTGCAG TGAGTTTTTAATCTGTAGTAATTCCTCAAGAGCGTCCTTGTATTATGGTATGAATTGGAC CTTAGCTCTTTTCGCCTTTGCTTAGTCGCTTCCACTAACCTAGCAACTACTTTCTCAGCG ATCATATCTAGCTGAGATTCTGGCAGTTCATGTACTTGAATTTCCAAATCGTTTCCTCCC AATCAAATTATTCCCCAAAGTATTTGTTATACACATATTAACAGGTTTATCCACAATATA TCGTGGGAACTTATTTTCGCCTACAATATATTGTGCTTGTTACATGATAGGCGACGTTGC CGGATCTACTCAAAGTCTTGACTGCGAATCAATTTTCGTGCAAATGAGCAGTTGACAATC TCATTAATAGACTTCAAGTAATCGCCAAGCTCTTTTTCAGCCTTTTCTTTTGCTTCAAAC ATAGTGGCAGCATATACAACTAGCGTGCAGCCAAAACCGTGTTTATTTGTGTACCTAACC ATAAATTCATCTTTCACTTCGGCACCTCCTACGGCAATCCTATATAAACTACAATAGATT TTTCCCATTCATACTCATTTACTCTTGTTGTTGCCATTTGATTAATTATGGCTGGGTCTG GCTCAACATTGTTAGAAAATATCTCATCGTAAATGAGATCAAATTCTTTTTCTAGCAAAT CTTCTTCATCATTAGATTTGAAATAGATTCGTTCTCCGTTATCCCAAACATAATCAATTT CTGCTTTTCCAAATGAACCTAGCCAATTTGTGTGTTCATCACTAGCAACAATCTCACTGT CAACCATCGGAACAATAGGTAGATCAGGATTTTCCTTGATCAGATTAAGTAGCTCTGCTA CGTTCTCTTTTTGAATCTCACTTTGTGTTTTCATTAGCTTTCCACCTCCAACAACTCTGG ATTTTCGTAGATGTTGCCTATGACTTCGTACTGATAATCCTCTAGAACATCTTGATTGAA TATGCGGCATTCCATATCATTATTTGGATTAATACAAACCAAACCAGAATGAAATCTTGA CTTTCTTACAACGCAAACTTCATTATCATAATAATCAAATCCATTATGAACACTGACTTT CACTATATCCCCCTCAAAAATCTCAACGCCGTTCTTGTCTTTCAGGCCTGTTGATTGAAG GAATATTAGGTTATCGAAATGAATGTCATAGCGATCACCGTTTTCCTGCTCGACGTATGC TATCTTATTTTCAAAATCAATGGATATGATACTAACTATCATCTCGTGGTATTTATCCCA TGCCTTAAAATTCGGTATCATATAATTCACTTCCATTTACTATTTTTTGTTGTATAATAT GTTTGAGCTAGATCACAATAGTTACTCTATAACCATTATGAATACCCCCTAGCTCACTGA CCGCTGTCACCTCATATGACGCGGTCTTTTTTTTGTTACAAATTATTTATGACTTATTTC TTCTTAACTACCGTTCGCGCTTGAAACTAAAACGGTTACTTGTTACGCTTTTAGTGTCTT TTGAGAAGACACCAATTGTGCGCAGCTAGGTAAACATGCTTCCCCACCTAGCCATAGACT GCCGTTTCATACCGCGGCAGTCTTTTTGTATGGTAATAGCTTTGTTAACCTATTACTTTA AACTTTGATAGCCGATCCTCTTTGACCGCTTGACTCATTTCCTCATCACTCCACGGCTGG AACAATCTTGAATGATAGGTAACTACTAAGTCAACGAACTCAAACTCAATTGATTCAAGA TTCGTTATTTCACCGCAAATTCCATCAAATACAAAAATGTCTCCAACCCTGTAGAGTGGA TTTTCTTCTGTGAACTCACCTTTGGGGTATTTTCTTACAAATTCACTTGTTCTTTCATAT TGGCTAAAATCTGATTTACCACCAACTAGCTGGGCTACTCCTTCCACTTCCATCCGAGCG GAACTACTATAAAAATGTTTAATTTCAACAATGTGTGTCAAAACATATTTTTCATCTTTA TAGTTAAATATTTCTCCAACTTTGATTTTTTTGTTAAAGCCTTTTCTACGCAATGTAAAG ATTGCTTGCAACATAGCACCTCGTTTCTATGCAATTGCTTCGGTCACCGGATCTATTTAT TTAAACTTTTTGACAAAGTTCTAAGTTGATACGCGGCTTTATTAGTTTGACGATAGACTA GAATAACTAAGCGAGTATCAATAGCTTTTAAGTCAACATATTCAAAAATATCGTCCGGAT TATTTTCGCTTTCCTTTTTCAGAAAAGCTTGGACGTGTACGTCATATGGTTGTGTATTAA ATTCTTTAAATTTGATCATTCCGCCACCTCTTCAAGCGCTCTAATAGTATCTAGGCCGTC CACCTCAACAAACTCGCCTGAGTCCATTAGAACAACCGCTTGCGCGCGTCTATTATCGGT AAATTGAGTTATTTGGATTAATGTTCCCAATTCCCCAGTAGATTCATATCTTTTTTCGAT GTTATACCAGTGGCTTTGCGGTATGCTCTCATTCCCAAAAGCAAACTCATCCTTGACGCT TTTTTCAATCCTAGCTAACAGTTCTACTCTAATGTTCATTCCGCCACCTCTTCCAAGTCC CGTTTCATGAACCACAGAGATTCACCATTCTCAAACTCAAGCCGAAAGGCTATAAGAACT CCGATCTCAACATCCACGCAAGTTCCAATTGATCCTTTTGGAACAATACTCGGATAAATT GTTTTATATTTTTTATTGATCATTCTCTTACCTGCTCTCTCTCATTTAGGTGATGAACAA TACTTATTGCATTTGAATATGCGATAGCTCTGTTTTCATATGCTTGCCACATACCATATC CAACAAGGCATCTTTCTTGGGCTTCAATCGCCTCGTCATATTTCTTCTGAAGTTCATCTA AAACTTCTTGCTTATTCATCGCTCACACCTACACTTTCTCGACTGTGCCGCCTGTTATAT ACGCTGTATACAATGCCGTTTCCTCGTTATCAAAGAGGATCGGCTTTTTCTTCGTACTGT CGAAAGCCCAATGTAACGAGTTGCCATATCCTGCTTCTATTGATGTCAGACAATACTTTT GATCATTAATTATTTTCCACTTCTGTTCTTGCTCGACCTCGTAGCCGTCTTGCATTCGAA TCAGAGTATCAATATCATGATTTAGATAAAACCATCGTTCGAAATCAGTCAGTCCTTCAT ATAAATCAACTGGCACTTTACCAGCTTCGCACAGTTCATATATTGCAAAATTTAAGTTGT GCTTATTTTCTTTGAACCACTCAACCACGAACTCTGGCACTTTGACTTTCTGCGGTTCGT CTAGCTGCTTGAAAATAATATCTAGAATGTCATCGCAAGCATCATTGTATCCTTCCTTAT AATCCGATCTGTTGAGTGACGTTTCCGGTTTTGAAAAATCATATTTTTCTTTATTAATTT CTTTGATTAAATCTTGTTTTTCCATTTCATCCCTCTTTTCTTACTTGATAGGCTGAGTTA GCTTCCGTTTTCAATTTCCATGATTGCTTTAAAGATCGGATAAACTTGTTGCGGTTGGAC CGCATTCCCTAAAGCAATCAATCTATTTTTGTCCAATTCTCTGGATACCCCATCATCCAC TCGACAAATGCCGGGTTCGGGTACTTTCCGATGTAGCTCTCGAAATTCTCGCCAATACTT CCAGGAAGAACTTTGCCATGCTTGCCGTTCGCTTCGGAAGGTGCAAGTGGGCGAATCCTC TTGTATGATTGACTGGCTGTGGGTGTTGCAAGCAACGATAAAGAACCTTTGTCTTTTGTG GATTGCCCCGATATCACTAGCTGCAACACTGAAAACCCAAACTTCGTAGCCTTCTTTTTC CAAGTCACTAACGGTTGTTTCGAGTCCGCGGTTAAGAATTCCTGGTACATTCTCGCCGAC AACCCAACGAGGTCGAATTTCCTTAACGAGTCTTGCGAATTCGTGCCATAAATAGCGATC GTCGTTCTCGGCTTTACCTTTTCCTGCGAGTGAGAAAGGCTGACAAGGAAATCCTCCGTG AATAATTCCAATTGTTCTTGCATCTATCCCACTACTTTCTAGCGTCTTAATATTTAACTG TTTTACATCTTCAAACTGTGGCACTGTTGGCCATTGCTTCATCAATATCTTTTTTGGGAA ATCGGCGTTCTCACAGAAGGCGACTGTTTCGATCCCTGCCCATTCTGCCGCTAGGTCAAG GCCGCCGATCCCCGAGAAAAGAGATAATGCTCTCATTGGCTTGCCTCCATTTCCTACATG ATTGGCGTGGTTACTGTATCTTTTCACTCATAAAAATTTTCACTACATCATCAATTTCAG TACCATAGACTTCATAATCAAAATCGGAGTCTAGAACCTCAAAGACTGCCGAAGTTTTAC TCGATAGGTCATACTGATCTCGTTCTGACCACATCCACTCCAAATCTTTCAGAAAAAGCT GTTGCCGCTCATTTAGTTCTGGTATTTTTTTGTCGAATTCTTCAACATGATAGACGTATC TCGTTTCGAATCCATTTTGATCTTGTGACAGCTTGACTGTCAGGCAGTCGCCAATTTGCT CGCCGTTGATATATAAAGGTGTTTTCTCGATCATTCGCCATCCTCCTGCAAAGCATAGCC TGCGATAACATCAAAATTAAATACTGCATGACGCTTAACTTGCGATCTAATGCCAAAATA ATCAAACTCAATCGTAATATCATGTACATTGTCGTACTTGAAATTCTCGACTCTCTCAAA AAAAGCTGTGCTTCCATTTTCAAAATAGATTGCTAATGTTTTATTCTCGTTCATGAATTT TTCCTCCTTGATAGTGGTCGCTTATTGACCTATTGCCGGTTCTTCATAAATCAGAAAAAC TGAATGGAGAATCTCTTCACCATAACCTTCACTGCTTTTTTCAGATTGAAACTTTATGTC TACAAAGGAAACATTCGTTTCACTAAGAAACTCATTTATTTCTCTTTCCAACTTCATTGG ATTTTCTTCATCAAAATACTTAACTCTTTTCATAATATTTCTCTCCTTTATGTTCTCCAT TTGTGGAACTATTCATTCTCAAATCCGATCCCATCGTCCATTAGTTCGTCTACTACGTTC CCTAATATCCTGACACCTTTAATTTCTTCAAACTGATTTTCTTCTGCGAATACTTTCTTT GCATTTTCCTCTGATGTTGCTACAACCGCTTTGACCCAAGTCATTTTGTTATCTTTTTTA CTAAAAGTCACTTGATAAATTGACCGCAAGATGGTCACCTTCTTTCTACTTGATAGCCCC AGTTAATCCTCTACGATTCGGGCTTTCCCAAAAGAAATCTTTCCTGTTCCATTCATTTCG ACTGGAAGTGCCACTTTCGGAGTTTTAGGTAACTCCAAGTCATTAAGCCCAATATCCTTC GCGAATCGATTAGCTGCTTTAACCATTTCTATAAGTTCTTTTGTCGATTCAAGATCTTGT TCTGTTAAAAGATTTGCTCCACAATCAGGACATTCTTTATTGAGCCATTGCGGGTACTCT TCATATTTCACATCCATATTTTTATAATCGCATTCAGGGTTATCGCATTTGATTCCATAA ATATTTAGTTCAGTCATGTCCATATCCATAATTAACTTACCTTCTTTCTAAGTTCATCTA CTGTAATCTCAAGTGCATCTGCTATTTTGCAGACAAGTTCAAATCTCGGGTCTTTTATAC TTCCGGCCATCAATTGAGTAATGTGTGCCGTGGAAGTATTGATTATTTTGGCTAGGCGGT ACTCTGTCATGTGTTTTTCAACTAAACGCTCATTTATACGTTCTACATTCAACATCGTTT AAACCTCCTAATATTGCGTTTTAGCGTAGCTAATTTAAATTAGCTAATGCCCCAGTTAAC ATAGCTTTCTGAGACCGAAAAATACAAGGTTCACTGCAATCGTTCAAGCAGCAAACCTTG CTACCTTTCCAACAGTCATTTGTCTTAAGCGACGTACTTTTCATGTTCTAGTTTCAGGTC TGAACCTGTTGTGTCTATATACTGAAGCGTCGTATCTACGTCCGTGTGCCCAAGGAAACG TCTGACATCGTTCAGGCTCATACCTCTTTTTAGCGCTAGTGATGGTTCCCCGTTGCTGAT CATAGTTTTCCATCGTCAACATAGTCAGCTCTGTAACTCGGCAGCCTGTCGATAACAAGA GTTCGAATGTTGCTTTCTCTTTCGGCTTCCGACAAGCATTTCGCATCAGTTCTACTTCCA CTGGTGTAAAGGCTTTTTTTAGTCGTTTTTCGACTTTGATCTTCTCAACCCTTCGCCCGG GATCCCTGCTAATGTATTCTTCTTCAAAGAGCCATTTAAAGAATCGACAGATTGCACCGC GTTCTCTATCTAAAGTTGCTGATGATAGATGATCATTCATTTCTCTATTCGCAATGTAAA GACGTATATCATTCGTGGTCACATCGTTAAATGATACGCGTACCCATCGATTAAATTTAT CTATCGTTCGCATTGCCAGATTGATCGTTCCAGGTGCAAGCCCCCGCAATTTCATGCTGA CGAAGTATTGCTTGTATGCGGCAATATCAGATGTTTCATCGTAGATGATTACATCTCTGC ATTCTTCTTCAAGTCGTAACTTTTCTAGGTTAATCGTTAAAACAATTTTCAGTTTTCTAA GTTGCTTTGCTTCAAGTTCGGGCTCCATGTTCCTGACAACAGCATTAATAAATTGCTCTT TCATTTCCATGTTTCTTTCACCCTTTCAAAAAAGGTCAGCTTCTCATGTGGTTTCTTTCT ATGCCATATTTTTTCATCCAGTAATAGACTGTGGGTTGCGAAGCCTTGTATTTCTCAGCT GCCGCTTTCCATCCGCCTTCTCTATACGTCTCTTCAAGTTCTTCCTTCGATGGCACCTGC AAGCGCTGATACTTCTTGATCTTGTGTTTCCTGCGAAGATATGCAAAAACACGGGGGTCA ATCCTATATTTCTCTCTTAATTTGCTAACAGGCATCTCTTGTTTTAACAATTCAACAATG TCTTCTTCCATACCTGGACGAGCGTCGACATATCGCTGATATCGTATGTCGTTCTTTTCT GAAATCGTTAAATCCTCTTCGTTCTCAATGATCAGCATTAACTGTTTATGTCTCTTACTT TTTTGCTTATCCATATACCATTCTGGATCATTTATTAGCAACAACAATTCACTCCATGCT TCCTGTTGCTCAGTGCTTTTACGTCTACTCATTTAACCCCTCCTAAAACGGCAGGTCATC GTCGCCGATGTCAATCGATGAACCACTAAAAGGATCGTTATCTCTACCAAAATCAGGCAC ACTATTTTTATTTGATTGATCATAGTTGCCACTTGAGTTAGTACTGGCGTTAGTATTCTG ACGCTGATCACTCGCACTACGTGATTCAAGCAATTGGAAGTTCTCAGCAACTACTTCTGT TACATAGACACGTTGTCCTTGCTGATTTTCATAGCTTCTTGTTTGAATACGGCCAATCAC ACCTAACAGCGTTCCCTTTTTAGCATAATTGGCTAACGTCTCAGCAGACTTCCGCCAGAT TACGCAGTTAATAAAGTCTGCATCTCTGTTACCATCTTGATTGGTAAAGTTTCTGTTCAC TGCTAGAGTGAATGTTGCTACTCCCGTGCCACTCGCTGTGTATCGTAAGTCAGGATCCTT TGTTAATCTCCCGACTAAAACCACATTGTTTATCATCCGTTTTCCTCCTTGTTTAGGTAC TCCGCAAGTTTCCTATCTAGTTCAGCTTGCTTTTCTGGCGATATTTCGACGTTTTTAGGC GGTTCGGCAATGTGTGGGGGTAATTCTTCCACTCTACCTTTAGGCTTGTTGTAGGCTCTC TCTGGCTTTCTATTCGCTTGTCGAGCCATCACATCATACTTTTCGCGCAGTTTTTTGGCT GAAAGAATGTTGCTACTCCAAAACGAATCTTTTTGGCACCATTCAATCATTCGTCCAACC TTTCCTATATCTCTTTCATCAAGCTCAACCATTTTTCTAATATCATCCGCCCACGTTTGA AAATTCGGCTTTTTTATTGGACCATTGTTATTGATTTTTTTATATAGATGTTTGGCCAGT TGTAAATAAGGAGAATCATCATCGTAAATTCGCTTGCGAGATTTGCGACTATCTTCTTTT ATATCTTTCTCTTTATCTATTTCTATATCTATATCTGTTGCGTTAGGTTGCGTTACATCT AACGTTAGACTAACGTTAGAATTCTTCTTTTTCTCATAATGCCTTTTAGCACGTAGTCTA TTTTGCTCCCGTATTTTCTCTAATCCTTCAACATTCTGGTGTTTTTCCCAGTTCGTAATC GCTATGCTGCCATCTGTATTCAAATCAATCATGTTAAACCCTTCTAGCGTAGTAAGAGCT AGCCGAACTGTATTTACTGGTTTATCAAATAACGTTGCAAGCATTTCTTCTGTGTAAGGC ATATTTCGCTGTATATAAATCAAGCCATCATCGTTTGTTTTTCCGGCTAATACAAGCAAT CGTATCCAAATAACCAAAATGGCATCAGCTTCAGGAACCGCTTGGATGAGTCGAATCTTC TCATCATCAAACATAGTTGTTTTTAACTTTATCCAACTTATTTCTGCCAAAAGCCTACCC TCCAATGTGAAGTTTTTTGCGATCCTCATCATTGAGTTTCACAAGTATAATCACGTATTT TTCCAAAAACTCTGTAAGACCTATTGTGTGTTGCTCACTGTGATGCCTCCGACACAATGC CATAAATCGGTAATCAGAATGGTTGATTTTTCTTCGATTCCGTCCCATTCCTACCGTCTC AACATGTGCTACATCTGCTTGCTCTAAGCAAATACAACAGCGACGATATTTCAAACACTG ATAAAACCATGCATTTTCTTGAAGAAGATACTCATAGATTTTTGGCAGTGGTACATTATT CGCTAAAACAAATTCGATTAAAAAATTGACCCATTGTCGAGCGGTCGACTTCGTTGCATT ATGATGCTCGAACCATTCACCCGATATACCCATGTACTCGTATTTAAGATATTGCTCAAT AAATACTGGTATATCTCCACTCCAATGCGCTATATCTGCAATAAGCGCATGAGATAGCGC ATTTTGCTTAGGAGAAATGCCGCGATTGTCTAACGCTGTGACACCCAAATAATTATCGCC GCCGTTTGCCAACAACCGTAAATACTCTTGATTGAATGCTTCTTCCAGTTCTATCTCTAC TGATCTACCGTTCATAGAGACAACCTTGCCAATCATTGCACCGGCACCACTTTAATGTTG TGATCCACGATATATTGATTTAGATCGTTCATTTGATCAATCGTTCCTGTCAACTGAAGA ACAGCGGTGATCAGTTCTGGCGCAGTCGAAACAGCCTCTTCATTTGTCGCAATTAATTCA CCAGTGTTTGGATCATAGAGAGCACCTGAGTCAGTTTCTTTTGCTTGTTGCATCGCCTGT TCTTCTGCAAGTTTCGCAAGTGCCGCATCATGTTCTTGTTTCGCAATACGCTGCTGTTCT GCTTGCTCACCACGAATACGCTTATCTTCAACTGCTTGTTTAATTTTTTCGCGAATGTCT GCAACACTCCAACCTTGCTCAATCAAGTTAGACCAAGCGTATGGATCTAGACCAGCGAGT TCCGCGTAGTCAGTTACAGTTGCTTTATCTGCCGCAATCCGTTCACGTTCCATAGCGATA ATTTTCATTTTATCCTTGATCTCATCAATGATTTTCGGACGTACTTCACCTTTTGTGGTA AACGCTGACTTGGCAAGCCAGTTTGAATGAACTTCAACTACATTAGGTTCTACATTGAAT AACTCAGCAAGTTTCTCCATTTCCGCTTGAATCTTTTCTAAGCGAATTGCTTTCTGCTCT TCATCGTACTTTTTGATTCCTTCGCCGATATCATCAGAGATTGTCGTAATTTTTTCGACG TACCCTTTCATGACGCTTTCAAATTGAGTTAGCGGTTTGGTGAACTCTCGCTTAATCTCT TTTCGTCGATCTTCCATAGCTTTGATGTATTTGTTTAACTGAGCACGAGCTTCTTTTGCT TCGGGGATATTACTATCCGAAAAGACTTGAGCGCCGTAATGCTCAGTAACTTGATTAATT AACTGATCCAGTTGGTCTTCATTTTCGATAGTGATCTTTGACGGCGTATAGTTTACCGCA AACTGAATATCTGTTACTGCTAGTCCATTTGTTGTCATTGTCTTTGCCCCCAAGGTATAT TTTGATTAGTTGGATTTTGTTGCTGATAGTTTTGCTGCTGGCGGTTCGAATCTTGATTTT GGTTTTCCTGTTGTTGACGCTGTAAGTATTGCTTTTTCCATGACTGTAACTTTTGTAAAG CAATACCGAATTCCGATTCGTTCATATCTTTCAATTCTTTTTCTAACTTAATCTCTGTTT TTAGAGTTCCTATGACGTTCACTGAGTTCGCATTTGAGAGGTTTGCTACATGATCAATCA GTTCTTCAATAGCCTGTAACTGCTCTTTGTCAATTACTTTTGGTGGTTGCAGTGGTTTCT CAGGATCATCACCAGTTGGAATCATAAACAAGCTAGTCAGTGCGTACTTTAATGCTCCTG TTTTCGCTTTGTAGACCGCTTTATCTCCTGAATCCTGACCATCACCATAACCGACCATTT TAAACGCTTCTCCGCTGTCTGCATCATTTACAGTGAATTCGATCTCAAGCGTAACTAATT GTTGACTCCCATTTCTTGTGGGAATTTGAGTCATGGTCCTACTTAATTCATTTGGGATCA TCATCAAATTACGATTAGCCATTTCTTTTCTAACAACATCTTTGATGTCACTTTCTAATG CATAGTCGTAATTTTGATGTTTGTTATGTCCATTCTTAGGAATTCTTTCAACGGCTTGCG TAATTTCAACAAGTTTATGCATCAAACCCGACTCGACATTCTTTTTTTCTTCTGTCATGG CTTACCTCCTGTGGTATACTAAAAAAAATAGTTTTTCTTTTGCTCACTAATTGCTTGCCG GCGAAGTGAGCTTTTTTTGTTCCCAAGCTTTTCTGCGTTCAATATTCTGTTTTGCTAGAA TTGTTGACTCGTTATGATGCCACCAACGATCCGCAATGATTTTTCCAATTTGTAATGCTT CTCTTCTGTTCATTACTATCTCACCTCTTTCAATTTGATATAATGGTTTAAAAACTGGAT GGTGGAATTATGAAATCTTCTGATTGGATTCAAGTTATTGCTATTTGCCTTACTCTTATT GTGTCTGTCATTTCAATTGTTCAATCGAATAGATCAATTAAATTAACAGAAAAAACTATA GAAGAATCTAACAGGCCGTATGTATCTGCATATGTGGATATAATAGATACAACATTTTTT GCAAAGTACTTAGTTTTAAAAAATTTTGGAAATACAATGGCCACTATATCTAAGCTTACG TTTGAAGGTCTTGAAGAAGACCAAGTAAACAGAAATCGTCAAATGAAATCTTTAGTTGGC GGGTCAATAGCGCCAAACCAGAAATTTTCCACTGCGGTTGAACCTGACTTTAGAGGAAAC GTAATAGTTCAGATTACTTATTCAGATACTCAGGGGAAAACTTATAAAGATATTTTTCAC CTTTACTTTGGTCAAACTACAGATATGATGTGGCAAAAAGATACTTCAAAAAATCGCTCT GAAGAGGCTAAAGCCATAAATAACGCTGCTCATGCAATAGTAAAAACTCTTAAATAGATC ACTTCTTTCTCCTTTTTAATCGCTTAAGTGTCTTATGGTTATCGACCATTATCGGAATTG TTATAACCAATGTTAGTGAAATTGCAACAATTAAAATGTAATCTCCAATATTCATCTTAG TCAGCCCCCTCGGCTGGCTTTTTCTTTTCCCATCCGATCGCTAGGAGAAAGATACCGATA TATCCGTATGCTGCCAACATGTTGAAACTCGAAATAATCGGAACAGCTAACATGCACATA ATTGTTGTCGCTAGGTTTATTTGCTTCATTGTCATGCTCCTTTTCTATGCAGTTTCTAAA TCCAAGCTCATTTGTCGCACTTGCATTTTGGTTGCTGTTGATGGTTCCCAATCATTGATA AAATCTAAGACTGTTTCATAGTGTCTGTTGCGTAGTTGAGTTCGCGTAGATACACCTGTC ACAGCTTTTACACCTGAATTAATGTCTTTATGGAGTTTTCCACGTTGTTCTTGAGTAAGC TTTCCAAATCCTCTGGCTACTTCCGAAACTCGCTGATTGATTCGACGACTGATATATCCG TAATCGCCAGCGCTGAGCACTGTGTTCTCTTCTAAATCAGCAACACGAGTATCTAGTTCA TCAACACGCTGATTCGTTTCTTCGCCAGCGGATAAAGCTAGTAACGCCAAATCTCTTGGC GTGGTAGGGATTTTCACTTGTTGCTTGATCTGATCTTCCATTTGATTAAACGCTTCGATG TACTTCAATTTGAAAGAGTCTGCTTTCTTTCCAGTAAAGCCAACAGCTATAAATGTCCAT CCATCTCTATTCATGTAGTACATTTTTTGTTCTCTTCCACGAGAATCTACATAAGAACCT AATGCAAACATCTTTTTGTAATGAGCTGAATTTTCAGCCGATTGAATTTTAGATTCAATT ACCTGGATTACATTCTTGTGTTCTTTCTCAAAACTTTCTGCCAAGTTCAAACTTGTCGTA ACAGCTTGGCGATCCTTCATGATTACTAAATCTGTCATTTTCTTCCTCCTTTACATAGCT ATTTTTGTTTTCTCGAATGCCTTTCTAAGATCAGATCGTTCGATTCGAACTGTATTCTCT CCCCACACCATTGGTGTTGCTCCGTTTGCGATAAGAAAGTTCAAGGTATCGTTCCCAATT CCTAACGTCTTCATGATTTGTGATTTACTAGGTGTTGGCGGCAAATCGATTATCTTATCC CAGATATCCAACTGATCTTTAATTTTTTCAAGCACAATATCAGCGGTAATATCAGCAATT TGATGTAAAATTTCATCTGGTATAAAAAACTCGTTGTTGACTTGAACAGTCTTCATGGTT ATACCTCCTGTTTTTCATCTAATAATTCTTCAATCGGTACATTCAAATAATTTGATACTT TTTTTAGACTAGCTAAGTTAGGATTTTGCTTATCCCACCTATAAATAGCATTTGCACCAA CTCCCGAATCTTTACCAATTTGCTTGATAGTAAGCTCTTTTTCTTTTGCTATACTTTTTA TATTGGCAACAATCGAAACCATAACGCGTTCACCTCCAATCTTTTTCGGTAAAAACAATT GACAAATCTACCACATGTGGTACTATAGACATACAGAAATAAGCATTCTAAATCCGCCAA GATTTATTGCTTTTTTTATATCTTATTTTTTGCTCATTTCTTATATCCTGAACCGAGTAT ACTATCTAATTTGGTAGTTGTCAACCATTTTCGGTAGATATTTTATTTAGTGTGCTCTTT TCCTTGAAAGGTGATTTTTATGAATACTTTAGACAGAATAAAACTACTAGCTAAACAAAG AGACGTAACTATTAAAGAACTTGCAGCAAATATTGGAATTGGTGAGAACTCTATATACCG ATGGGATAAAACCAGTCCTGCATCCGACAAACTGCAAAAAGTTGCTGATTACTTCGACGT TTCCACTGACTATCTACTAGGTCGAACTGAGAAAAAGAAATACTATGAATTGTCTGATAA AGAGAAAAAAGATATCGCTATTCAGGCAGAAGAATTAATAGAGGGGATTGCTAACGGGGA AAATTTGAACTTTTACGGTGAGCCAGCTACGAAAGATCAAAAAGATCGTCTATTGATAGC TATTCGTACTGCAATGGAGATGAACAAGGAAGAAGCAAAACAAAAATTCACCCGTAAAGA TTACAGAGACTAGTTAGGAGGGCCTTATATGAGTTACTACGTAGACGATGCGTTTGATAA AATTATTAAGAAATATCGGCCCTTCAACGTCTATGAATTAATACGAGAGGCTCATTGCAA ATTACTTTATGCAGATTTAGATGATGAAACGGGCGGTTGCACTCTAACTAGTCATCGTTG TCACACAATTATTGTGAATGTGAATTGGCCCGAATGGTATCAAAAATTCGTCATCCTTCA TGAATTTAGCCATATAAAAATGCATGGAGGTTCTACTACCCCATTTTATCGATCAGTTGG TTTGGATTCATTTATTTCCAAAATGGAGTGTGAAGCAAATTCTCTCGCTATGAAACTATT AATTTATATGCAAGACAAAGATGACTTAAATGGATTAACAGAGTTTCAAATTATGGATTA TTTGGGTTTACCTCACGAATTAATAAGGTATCTATAAATAGCTATTAAAGCTATTATTAA TTTTTTATCATTTTTACCGAACATACATTCGAAAGGAGCAATAAAAATGCAACACCAAGA ATTCAAAGAATGGTTAGAACAAAATACTCGTGGACATGAAATCTTTATTATTAAGGCTAT GGAGTCACGAAAGGAAAAGAATAAAAAGAGATCCGGAAAAACAAAAAAGTGGACTGATAG ACAAATGGAGCGTCAAGTAGAGTCAATGTGGGCTGATGTTGTGAAAAACGCCTACGAGCA AATCAAAACACACAAAGGTGTTCCTAAATTTAATGGGTATCAAATATGGTTAGATTTTTT TGCTGAAAATGACTATGTAGAAAATTTTGATGATTCTATGGCAGAACTGGAAATTCCATA AACGAAAATAAGAGGAGTGAGTCACATGGCAATGATAAAACAATACCAGAAGAAAAATGG TGACAAAGCGTGGTATTTTAAAACGTATCTTGGGATCAATCCATTAACTGGTAAAAAGCA GTACACAACTAAACGAGGTTTTAAAACTAAAAAAGAAGCCAAAATAGCTTTAGCAAAGTT GGAACTTCAAGCTAAAGATAATAAGTACACGCCGCAATCAAATATGACTTTTGGAGAAGT TGCTGACAAATGGCTCAAAAGTTACAAAAATACAGTGAAAGAAAGTTCATACAGTAGAGT GTATACTATCTTCCAAAGCAATATACTGCCACACTTTAAAGAAAAAAGAATTTCCAAGAT TAATATTCCTTATTGCCAAAATATTGTTAATGAATGGTATCAAGAGTACAAAACTTACAA AGCTATTCGTTCTTACACATCGGCTGTCTTTGACTACGCAAAGGAACTACGTCTTATAGA TGATAACCCTATGGAACATGTGCCTGTTCCAAAGAAAAAGAAGGAGGTAATCAAAGAAAA GAAATTCTTCGAAAAGGAAGAACTTGAACGATTCCTAAAATGTTGCTCTGAGGATAGTTA CCCTTTAACATATCCTTTATTTAGACTTCTATCTTTTACTGGAATACGTAAAGGAGAACT TTTAGCATTAACATGGAACGATATAGATTTCGATAATAAAACATTAGACATTAATAAAAC ATCAGCAAGAAATTATAATGGTCGCCCTATAATTACCGATCCTAAAAATCATAGCTCGAA TCGCCGAATCTCCTTAGACAATGAAACAATCAAAGTTTTAAAAAAATGGCGAATCGATCA AAGGAAATATTTATTGAGTTATGGTATTAATTCGTTAGCTCCCAATCAATTGGTTTTTTC AAGCAAGTCTAATCAAATTCTAGATCACGCAAGAATAAACCGCATTTTATCTAGAATATG TAAGGCTAACAATTTTGAAGATATAAAAGTTCATGGACTTAGACACACTCATTGCAGCCT TCTGTTTGAAGCTGGCTTGTCCATTCAAGAAGTTCAATATAGATTAGGTCATAGCAACGC TAGAACAACACTCGAAATATATTCCCACGTAACAAAAAATCAGCAAGAAAAATCTGCTGA AAAATTCGCGAAATACATCAACTTTTAAATAGTATGGTCAAAAGTATGGTCAAAACAAAA AAAGAAGCGCTAAACCCCTTGATATAAAGGAATTTAGCACCTTGTAATTATTTTGCATAG TCGGTTGCTCGTGTCTCACGAATAACCACTACTTTAATATGTCCGGGGTAATCCAATTCG TCTTCAATTCTGCGACGGATATCGCGAACCAAACGAACAGAATCCAAATCAGAAATTTCT TCTGGTTTGACCATAACACGTACTTCACGTCCGGCTTGAACTGCGAAGCTAGAATCAACT CCATCAAAACTATTTGAAATGTTTTCTAAGTTTTCTAAACGACGGATATAGTTTTCTAAA GATTCACTCCGCGCACCTGGTCGAGCAGCTGACACTGCATCGGCAGCGGCTACTAAAACA GATATCACTGAAGTTGCTTCTGTATCTCCATGGTGAGAGGCAATTGCATTAATCACGACC GGATTTTCACGATATTTCGCGGCTAATTCAGCGCCAATTTCAACGTGAGACCCTTCAATC TCGTGGTCTAGTGCTTTACCAATATCATGAAGCAATCCTGCGCGTTGGGCTAACTGAACA TTTTCACCAAGTTCTGCAGCTAACACACCGGTTAATTTCGCTACTTCAATCGAGTGATTC AACACGTTTTGACCATAGCTGGTACGGAAATGCAAACGACCTAAAATCTTGATCAAATCT GGATGCAGGGTATGCGCACCAACTTCAAAGGCCGCTTGTTCCCCGTATTCGCGAATACGT TCATCCATTTCTTTGCGAGATTTTTCAACCATTTCTTCGATCCGTGCCGGATGAATCCGG CCATCTTGAATCAATTTCTCTAACGTCATCCGAGCAATTTCCCGTCTGATTGGATCAAAG CCGGATAAAACAACCGCTTCTGGTGTATCATCAATAATTAAATCGATCCCCGTCAATGTT TCTAATGTTCGAATATTACGGCCTTCACGTCCAATGATGCGACCTTTCATCTCATCATTT GGCAATGTAACCACCGAAACAGTCGTTTCAGAAACAGCATCAGCACCACAGCGTTGAATC GCCATCGCTAAAAGATTCTTCGCCTTGCGATCAGCTTCTTCCTTGGCACGTTGCTCAGAT TCCTTGACCATAACGGTTAACTCATGGTTCAATTCCTCTTCGGTTCTCTTCATAATTACT TCTTTCGCTTCATCCTTCGTTAAAGAAGCAACCTGTTCCAATTTTGTTTGTTGTTCATTA ATCAGTTGTTCTACATCTTTTTCTCGCTCGTCAATTAATTGCTGTCTAGCACTGATCTTT GTTTCTTTTTCTTCCAGTGAGTGCTCACGCTTCTCTAGAGAATCATCTTTACGATCTAAA GTCTGTTCTCTTTGAAGCAAGCGATTTTCTTGTGATTTTAATTCTTGTCTGCTTTCTTTC AACTCACTTTCAACTTGTGCGCGATACTGCTGGTTTTCTTCCTTGGCTTCCAACAAAGCT TCTTTCTTCAAGGTTTCCGCTTCTTTATTTGCATGCGTAATGATCCCTCTAGCTGTGTTT TGTGCCCCATCAATTTCTTTTTCATGGCGTGCTTTTGCGACCATGAAACCCAAACCAAGA CCGACAATTAAACCGATGATAGCGAGGAGAATAGGAACTAACATTAAATCCACCTCCGTA CTATCTTATTTACCTATCTGTAGTTTTTTGATAAACGAATGTCAAATTATCAATATGCCT ACTTGCATATGTGTGAGAGTCACACAACTTTATTCTAATGTTTGTCTGATAGCGTGTCAA CTTTATTTCTCTTTTGCCAGATTCAACAATAAAGCGCTTTGATCCGCTGTAAAATAGTCC GCAAAAAAACACTAATGATCGGACAAATATGCCTCATCATTAGTGTTGATTTGTTTTTTA TTCATCTAAAGGCAATTCTTCCTGACCCGCTTCTTCAGCTTCCGTCACATCGCCTTCTTC ACCGATACCATAAGCTGCACGTACACGTGTCGCAACTTCTGCCATCATTTCTGGATGATC CGCCAAATATTTCTTAGCGTTTTCGCGTCCTTGTCCAATCCGATCTTCTTTATAGCCATA CCAAGCACCGCTCTTGTCGACGATGTCTTGTTCCACAGCCATATCTAACAATTCGCCTTC TTGCGAGATTCCGAAGCCGTACATAATATCAACTTCAGCTACCTTGAATGGTGGCGCTAC TTTATTCTTAACGACTTTGATCTTGGTACGATTACCAACGATATCCGTTCCATTTTTCAA TTGCTCCGCACGACGTACTTCTAAGCGTACGGTTGCGTAGAACTTCAATGCACGTCCACC AGGCGTTGTTTCAGGATTACCAAACATAACACCGACTTTTTCACGAATTTGGTTAATAAA GACGGCGATAGTCTTTGTTTTGTTGATAGAGCCTGACAGCTTGCGCAATGCTTGTGACAT CAAACGAGCCTGCAGACCAACGTGCGCATCACCCATCTCGCCATCGATTTCAGCACGGGG GACTAGCGCGGCCACCGAGTCAATAACGATAATATCGACTGCGCCACTTGAAACTAAAGC ATCTGCAATTTCTAAGCCTTGTTCCCCAGTATCTGGTTGTGATAGCAGCAATTCATCAAT GTTTACACCTAGACGTTGTGCGTATTGAGGGTCCAACGCGTGCTCGGCATCAATAAAGGC TGCCGTCCCGCCATGTTTTTGAACTTCTGCAATCGCATGCAGTGCAACCGTTGTTTTACC AGAACTTTCTGGACCATATACTTCGATGATTCGTCCACGAGGGTATCCACCAACACCTAA CGCAACGTCCAATGCCAAAGAACCGCTTGGAATTGTTGAGATTTGCTGATCGACCTTTTC TCCTAATTTCATGATCGAACCTTTACCATAATTCTTTTCAATCTTCTTCATTGCAGCATC TAAGGCTGCCTTGCGATCATTTGCCAA
Region Details
| Region | 1 |
| Region Length | 19.6Kb |
| Completeness(score) | incomplete(60) |
| Specific Keyword | tail,integrase |
| Region Position | 876-20522 |
| # tRNA | 0 |
| # Total Proteins | 33 |
| # Phage Hit Proteins | 22 |
| # Hypothetical Proteins | 9 |
| Phage + Hypothetical Protein % | 93.9% |
| # Bacterial Proteins | 2 |
| Attachment Site | yes |
| # Phage Species | 18 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_phiEf11_NC_013696(3) PHAGE_Entero_phiFL1A_NC_013646(3) PHAGE_Bacill_BM5_NC_029069(2) PHAGE_Lister_B025_NC_009812(2) PHAGE_Paenib_Harrison_NC_028746(2) PHAGE_Lactob_J_1_NC_022756(2) PHAGE_Entero_phiFL3A_NC_013648(2) PHAGE_Entero_vB_IME197_NC_028671(2) PHAGE_Lactob_LJ_NC_048680(2) PHAGE_Lister_A500_NC_009810(2) PHAGE_Lactob_PL_1_NC_022757(2) PHAGE_Bacill_BCJA1c_NC_006557(2) PHAGE_Entero_phiFL2A_NC_013643(2) PHAGE_Butyri_Arawn_NC_048848(1) PHAGE_Oenoco_phiS13_NC_023560(1) PHAGE_Clostr_PhiS63_NC_017978(1) PHAGE_Oenoco_phiS11_NC_023571(1) PHAGE_Mycoba_Kostya_NC_011056(1) PHAGE_Strept_9873_NC_047763(1) PHAGE_Paenib_Eltigre_NC_048717(1) PHAGE_Lactob_iA2_NC_028830(1) PHAGE_Strept_phiNJ2_NC_019418(1) PHAGE_Entero_phiEF24C_NC_009904(1) PHAGE_Strept_A25_NC_028697(1) PHAGE_Lister_vB_LmoS_293_NC_028929(1) PHAGE_Strept_EJ_1_NC_005294(1) PHAGE_Lister_A006_NC_009815(1) PHAGE_Salini_M8CRM_1_NC_042351(1) PHAGE_Entero_EFLK1_NC_029026(1) PHAGE_Lister_A118_NC_003216(1) PHAGE_Staphy_13_NC_004617(1) PHAGE_Strept_315.6_NC_004589(1) PHAGE_Bacill_phi4B1_NC_028886(1) PHAGE_Oenoco_phi9805_NC_023559(1) PHAGE_Sulfit_pCB2047_C_NC_020856(1) PHAGE_Entero_EF62phi_NC_017732(1) PHAGE_Lister_2389_NC_003291(1) PHAGE_Paenib_Leyra_NC_048692(1) PHAGE_Paenib_Jacopo_NC_048718(1) PHAGE_Lister_LP_101_NC_024387(1) PHAGE_Paenib_Likha_NC_048693(1) PHAGE_Paenib_HB10c2_NC_028758(1) PHAGE_Strept_9874_NC_031023(1) PHAGE_Brocho_NF5_NC_015252(1) PHAGE_Anoxyb_A403_NC_048701(1) PHAGE_Lister_LP_030_3_NC_024384(1) PHAGE_Strept_phiARI0131_2_NC_031941(1) PHAGE_Strept_9871_NC_031069(1) PHAGE_Lactoc_ul36_NC_004066(1) PHAGE_Lactob_Sha1_NC_019489(1) PHAGE_Lactob_phiadh_NC_000896(1) PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1) PHAGE_Bacter_Lily_NC_028841(1) PHAGE_Entero_EFC_1_NC_025453(1) PHAGE_Thermo_THSA_485A_NC_018264(1) PHAGE_Salini_M8CC_19_NC_042349(1) PHAGE_Bacill_phi105_NC_048631(1) PHAGE_Lactoc_Tuc2009_NC_002703(1) PHAGE_Mycoba_DrDrey_NC_022059(1) PHAGE_Entero_ECP3_NC_027335(1) PHAGE_Strept_PH15_NC_010945(1) PHAGE_Clostr_CDKM9_NC_048642(1) PHAGE_Lister_LP_HM00113468_NC_049900(1) PHAGE_Faecal_FP_Brigit_NC_047909(1) PHAGE_Bacill_phi4J1_NC_029008(1) PHAGE_Lactob_Lc_Nu_NC_007501(1) PHAGE_Strept_T12_NC_028700(1) PHAGE_Geobac_TP_84_NC_041918(1) PHAGE_Staphy_SMSAP5_NC_019513(1) PHAGE_Bacill_phi105_NC_004167(1) PHAGE_Mycoba_SirDuracell_NC_041987(1) PHAGE_Lactoc_bIL286_NC_002667(1) PHAGE_Lactob_CL1_NC_028888(1) PHAGE_Staphy_IME1361_01_NC_048657(1) PHAGE_Strept_5093_NC_012753(1) |
| First Most Common Phage # | 3 |
| First Most Common Phage % | 9.09% |
| GC % | 38.59% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|WOUD01000035.1| Enterococcus avium strain APC2848 44678, gc%: 39.72%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 35 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 876..888 | attL | 0.0 | Showinfo_outline |
| 2 | complement(1325..1822) | PHAGE_Entero_EFC_1_NC_025453: hypothetical protein; GM534_13245; phage(gi725950543) | 3.70e-14 | Showinfo_outline |
| 3 | complement(1961..2152) | hypothetical protein; GM534_13250 | 0.0 | Showinfo_outline |
| 4 | complement(2164..2529) | PHAGE_Lister_LP_HM00113468_NC_049900: hypothetical protein; GM534_13255; phage(gi100022) | 5.46e-06 | Showinfo_outline |
| 5 | complement(2529..2936) | PHAGE_Entero_phiFL2A_NC_013643: YopX superfamily protein; GM534_13260; phage(gi281416516) | 3.35e-16 | Showinfo_outline |
| 6 | complement(3260..3709) | PHAGE_Entero_EF62phi_NC_017732: hypothetical protein; GM534_13265; phage(gi384519770) | 3.86e-23 | Showinfo_outline |
| 7 | complement(3748..3954) | PHAGE_Entero_phiFL1A_NC_013646: hypothetical protein; GM534_13270; phage(gi281416354) | 2.70e-24 | Showinfo_outline |
| 8 | complement(3951..4214) | hypothetical protein; GM534_13275 | 0.0 | Showinfo_outline |
| 9 | complement(4375..4554) | hypothetical protein; GM534_13280 | 0.0 | Showinfo_outline |
| 10 | complement(4564..5100) | PHAGE_Entero_EFLK1_NC_029026: hypothetical protein; GM534_13285; phage(gi971766806) | 4.22e-18 | Showinfo_outline |
| 11 | complement(5133..5891) | PHAGE_Paenib_Jacopo_NC_048718: tail length tape-measure protein; GM534_13290; phage(gi100057) | 3.22e-56 | Showinfo_outline |
| 12 | complement(5926..6249) | hypothetical protein; GM534_13295 | 0.0 | Showinfo_outline |
| 13 | complement(6246..6449) | PHAGE_Entero_phiFL1A_NC_013646: hypothetical protein; GM534_13300; phage(gi281416353) | 2.83e-07 | Showinfo_outline |
| 14 | complement(6477..6695) | sporulation protein Cse60; GM534_13305 | 0.0 | Showinfo_outline |
| 15 | complement(6704..6904) | hypothetical protein; GM534_13310 | 0.0 | Showinfo_outline |
| 16 | complement(6938..7258) | PHAGE_Sulfit_pCB2047_C_NC_020856: hypothetical protein; GM534_13315; phage(gi472341799) | 3.09e-05 | Showinfo_outline |
| 17 | complement(7267..7470) | PHAGE_Clostr_CDKM9_NC_048642: tail assembly protein; GM534_13320; phage(gi100053) | 1.51e-06 | Showinfo_outline |
| 18 | complement(7620..8385) | hypothetical protein; GM534_13325 | 0.0 | Showinfo_outline |
| 19 | complement(8411..8887) | hypothetical protein; GM534_13330 | 0.0 | Showinfo_outline |
| 20 | complement(8898..9371) | PHAGE_Strept_5093_NC_012753: single-stranded DNA binding protein; GM534_13335; phage(gi238801886) | 1.50e-65 | Showinfo_outline |
| 21 | complement(9368..10285) | PHAGE_Entero_phiEf11_NC_013696: putative phage replisome organizer; GM534_13340; phage(gi282598734) | 1.46e-62 | Showinfo_outline |
| 22 | complement(10290..10931) | PHAGE_Lactob_PL_1_NC_022757: hypothetical protein; GM534_13345; phage(gi557308025) | 1.41e-39 | Showinfo_outline |
| 23 | complement(10928..11893) | PHAGE_Entero_phiEf11_NC_013696: putative replication protein; GM534_13350; phage(gi282598768) | 4.78e-67 | Showinfo_outline |
| 24 | complement(11890..12633) | PHAGE_Geobac_TP_84_NC_041918: tail assembly protein; GM534_13355; phage(gi100053) | 1.02e-23 | Showinfo_outline |
| 25 | 12885..13412 | PHAGE_Strept_phiARI0131_2_NC_031941: u-spanin; GM534_13360; phage(gi100032) | 7.00e-27 | Showinfo_outline |
| 26 | complement(13700..14413) | PHAGE_Entero_phiFL1A_NC_013646: anti-repressor protein; GM534_13365; phage(gi281416331) | 3.07e-94 | Showinfo_outline |
| 27 | complement(14426..14731) | hypothetical protein; GM534_13370 | 0.0 | Showinfo_outline |
| 28 | complement(14734..14937) | PHAGE_Bacill_phi4B1_NC_028886: DNA-binding helix-turn-helix protein; GM534_13375; phage(gi971821252) | 8.15e-10 | Showinfo_outline |
| 29 | 15175..15588 | PHAGE_Bacill_phi4B1_NC_028886: DNA-binding helix-turn-helix protein; GM534_13380; phage(gi971821252) | 3.13e-42 | Showinfo_outline |
| 30 | 15604..16032 | PHAGE_Anoxyb_A403_NC_048701: tail fiber protein; GM534_13385; phage(gi100052) | 8.81e-12 | Showinfo_outline |
| 31 | 16102..16416 | hypothetical protein; GM534_13390 | 0.0 | Showinfo_outline |
| 32 | 16447..17583 | PROPHAGE_Oceano_HTE831: integrase; GM534_13395; phage(gi23097608) | 3.82e-89 | Showinfo_outline |
| 33 | complement(17663..19219) | ribonuclease Y; GM534_13400 | 0.0 | Showinfo_outline |
| 34 | 19462..19474 | attR | 0.0 | Showinfo_outline |
| 35 | complement(19473..20522) | PHAGE_Bacill_phi4J1_NC_029008: RecA; GM534_13405; phage(gi971821630) | 2.09e-156 | Showinfo_outline |
Sequence
>876..888
TGATTTGTTTTTT
Sequence
>complement(1325..1822)
EnterococcusaviumMEIQVHELPESQLDMIAEKVVARLVEATKQRRKELRSNSYHNTRTLLRNYYRLKTHCKIVEEQVEEDFASMWNDWRFDVDSLLEHKAKTAKLMKHVDKALVELKAEDERAYDILNMKYLLPKCFADEYIASKYAVDRRTIGKWIKKAVEQLSVFIFGVDVVIDWL
Sequence
>complement(1961..2152)
EnterococcusaviumMKDEFMVRYTNKHGFGCTLVVYAATMFEAKEKAEKELGDYLKSINEIVNCSFARKLIRSQDFE
Sequence
>complement(2164..2529)
EnterococcusaviumMKTQSEIQKENVAELLNLIKENPDLPIVPMVDSEIVASDEHTNWLGSFGKAEIDYVWDNGERIYFKSNDEEDLLEKEFDLIYDEIFSNNVEPDPAIINQMATTRVNEYEWEKSIVVYIGLP
Sequence
>complement(2529..2936)
EnterococcusaviumMIPNFKAWDKYHEMIVSIISIDFENKIAYVEQENGDRYDIHFDNLIFLQSTGLKDKNGVEIFEGDIVKVSVHNGFDYYDNEVCVVRKSRFHSGLVCINPNNDMECRIFNQDVLEDYQYEVIGNIYENPELLEVES
Sequence
>complement(3260..3709)
EnterococcusaviumMLQAIFTLRRKGFNKKIKVGEIFNYKDEKYVLTHIVEIKHFYSSSARMEVEGVAQLVGGKSDFSQYERTSEFVRKYPKGEFTEENPLYRVGDIFVFDGICGEITNLESIEFEFVDLVVTYHSRLFQPWSDEEMSQAVKEDRLSKFKVIG
Sequence
>complement(3748..3954)
EnterococcusaviumMIKFKEFNTQPYDVHVQAFLKKESENNPDDIFEYVDLKAIDTRLVILVYRQTNKAAYQLRTLSKSLNK
Sequence
>complement(3951..4214)
EnterococcusaviumMNIRVELLARIEKSVKDEFAFGNESIPQSHWYNIEKRYESTGELGTLIQITQFTDNRRAQAVVLMDSGEFVEVDGLDTIRALEEVAE
Sequence
>complement(4375..4554)
EnterococcusaviumMNKQEVLDELQKKYDEAIEAQERCLVGYGMWQAYENRAIAYSNAISIVHHLNEREQVRE
Sequence
>complement(4564..5100)
EnterococcusaviumMEKQDLIKEINKEKYDFSKPETSLNRSDYKEGYNDACDDILDIIFKQLDEPQKVKVPEFVVEWFKENKHNLNFAIYELCEAGKVPVDLYEGLTDFERWFYLNHDIDTLIRMQDGYEVEQEQKWKIINDQKYCLTSIEAGYGNSLHWAFDSTKKKPILFDNEETALYTAYITGGTVEKV
Sequence
>complement(5133..5891)
EnterococcusaviumMRALSLFSGIGGLDLAAEWAGIETVAFCENADFPKKILMKQWPTVPQFEDVKQLNIKTLESSGIDARTIGIIHGGFPCQPFSLAGKGKAENDDRYLWHEFARLVKEIRPRWVVGENVPGILNRGLETTVSDLEKEGYEVWVFSVAASDIGAIHKRQRFFIVACNTHSQSIIQEDSPTCTFRSERQAWQSSSWKYWREFRELHRKVPEPGICRVDDGVSRELDKNRLIALGNAVQPQQVYPIFKAIMEIENGS
Sequence
>complement(5926..6249)
EnterococcusaviumMIEKTPLYINGEQIGDCLTVKLSQDQNGFETRYVYHVEEFDKKIPELNERQQLFLKDLEWMWSERDQYDLSSKTSAVFEVLDSDFDYEVYGTEIDDVVKIFMSEKIQ
Sequence
>complement(6246..6449)
EnterococcusaviumMNENKTLAIYFENGSTAFFERVENFKYDNVHDITIEFDYFGIRSQVKRHAVFNFDVIAGYALQEDGE
Sequence
>complement(6477..6695)
EnterococcusaviumMENIKERNIMKRVKYFDEENPMKLEREINEFLSETNVSFVDIKFQSEKSSEGYGEEILHSVFLIYEEPAIGQ
Sequence
>complement(6704..6904)
EnterococcusaviumMRSIYQVTFSKKDNKMTWVKAVVATSEENAKKVFAEENQFEEIKGVRILGNVVDELMDDGIGFENE
Sequence
>complement(6938..7258)
EnterococcusaviumMDMTELNIYGIKCDNPECDYKNMDVKYEEYPQWLNKECPDCGANLLTEQDLESTKELIEMVKAANRFAKDIGLNDLELPKTPKVALPVEMNGTGKISFGKARIVED
Sequence
>complement(7267..7470)
EnterococcusaviumMLNVERINERLVEKHMTEYRLAKIINTSTAHITQLMAGSIKDPRFELVCKIADALEITVDELRKKVS
Sequence
>complement(7620..8385)
EnterococcusaviumMEMKEQFINAVVRNMEPELEAKQLRKLKIVLTINLEKLRLEEECRDVIIYDETSDIAAYKQYFVSMKLRGLAPGTINLAMRTIDKFNRWVRVSFNDVTTNDIRLYIANREMNDHLSSATLDRERGAICRFFKWLFEEEYISRDPGRRVEKIKVEKRLKKAFTPVEVELMRNACRKPKEKATFELLLSTGCRVTELTMLTMENYDQQRGTITSAKKRYEPERCQTFPWAHGRRYDASVYRHNRFRPETRTKVRRLA
Sequence
>complement(8411..8887)
EnterococcusaviumMSRRKSTEQQEAWSELLLLINDPEWYMDKQKSKRHKQLMLIIENEEDLTISEKNDIRYQRYVDARPGMEEDIVELLKQEMPVSKLREKYRIDPRVFAYLRRKHKIKKYQRLQVPSKEELEETYREGGWKAAAEKYKASQPTVYYWMKKYGIERNHMRS
Sequence
>complement(8898..9371)
EnterococcusaviumMINNVVLVGRLTKDPDLRYTASGTGVATFTLAVNRNFTNQDGNRDADFINCVIWRKSAETLANYAKKGTLLGVIGRIQTRSYENQQGQRVYVTEVVAENFQLLESRSASDQRQNTNASTNSSGNYDQSNKNSVPDFGRDNDPFSGSSIDIGDDDLPF
Sequence
>complement(9368..10285)
EnterococcusaviumMAEISWIKLKTTMFDDEKIRLIQAVPEADAILVIWIRLLVLAGKTNDDGLIYIQRNMPYTEEMLATLFDKPVNTVRLALTTLEGFNMIDLNTDGSIAITNWEKHQNVEGLEKIREQNRLRAKRHYEKKKNSNVSLTLDVTQPNATDIDIEIDKEKDIKEDSRKSRKRIYDDDSPYLQLAKHLYKKINNNGPIKKPNFQTWADDIRKMVELDERDIGKVGRMIEWCQKDSFWSSNILSAKKLREKYDVMARQANRKPERAYNKPKGRVEELPPHIAEPPKNVEISPEKQAELDRKLAEYLNKEENG
Sequence
>complement(10290..10931)
EnterococcusaviumMIGKVVSMNGRSVEIELEEAFNQEYLRLLANGGDNYLGVTALDNRGISPKQNALSHALIADIAHWSGDIPVFIEQYLKYEYMGISGEWFEHHNATKSTARQWVNFLIEFVLANNVPLPKIYEYLLQENAWFYQCLKYRRCCICLEQADVAHVETVGMGRNRRKINHSDYRFMALCRRHHSEQHTIGLTEFLEKYVIILVKLNDEDRKKLHIGG
Sequence
>complement(10928..11893)
EnterococcusaviumMTTNGLAVTDIQFAVNYTPSKITIENEDQLDQLINQVTEHYGAQVFSDSNIPEAKEARAQLNKYIKAMEDRRKEIKREFTKPLTQFESVMKGYVEKITTISDDIGEGIKKYDEEQKAIRLEKIQAEMEKLAELFNVEPNVVEVHSNWLAKSAFTTKGEVRPKIIDEIKDKMKIIAMERERIAADKATVTDYAELAGLDPYAWSNLIEQGWSVADIREKIKQAVEDKRIRGEQAEQQRIAKQEHDAALAKLAEEQAMQQAKETDSGALYDPNTGELIATNEEAVSTAPELITAVLQLTGTIDQMNDLNQYIVDHNIKVVPVQ
Sequence
>complement(11890..12633)
EnterococcusaviumMTEEKKNVESGLMHKLVEITQAVERIPKNGHNKHQNYDYALESDIKDVVRKEMANRNLMMIPNELSRTMTQIPTRNGSQQLVTLEIEFTVNDADSGEAFKMVGYGDGQDSGDKAVYKAKTGALKYALTSLFMIPTGDDPEKPLQPPKVIDKEQLQAIEELIDHVANLSNANSVNVIGTLKTEIKLEKELKDMNESEFGIALQKLQSWKKQYLQRQQQENQNQDSNRQQQNYQQQNPTNQNIPWGQRQ
Sequence
>12885..13412
EnterococcusaviumMKSSDWIQVIAICLTLIVSVISIVQSNRSIKLTEKTIEESNRPYVSAYVDIIDTTFFAKYLVLKNFGNTMATISKLTFEGLEEDQVNRNRQMKSLVGGSIAPNQKFSTAVEPDFRGNVIVQITYSDTQGKTYKDIFHLYFGQTTDMMWQKDTSKNRSEEAKAINNAAHAIVKTLK
Sequence
>complement(13700..14413)
EnterococcusaviumMTDLVIMKDRQAVTTSLNLAESFEKEHKNVIQVIESKIQSAENSAHYKKMFALGSYVDSRGREQKMYYMNRDGWTFIAVGFTGKKADSFKLKYIEAFNQMEDQIKQQVKIPTTPRDLALLALSAGEETNQRVDELDTRVADLEENTVLSAGDYGYISRRINQRVSEVARGFGKLTQEQRGKLHKDINSGVKAVTGVSTRTQLRNRHYETVLDFINDWEPSTATKMQVRQMSLDLETA
Sequence
>complement(14426..14731)
EnterococcusaviumMKTVQVNNEFFIPDEILHQIADITADIVLEKIKDQLDIWDKIIDLPPTPSKSQIMKTLGIGNDTLNFLIANGATPMVWGENTVRIERSDLRKAFEKTKIAM
Sequence
>complement(14734..14937)
EnterococcusaviumMVSIVANIKSIAKEKELTIKQIGKDSGVGANAIYRWDKQNPNLASLKKVSNYLNVPIEELLDEKQEV
Sequence
>15175..15588
EnterococcusaviumMNTLDRIKLLAKQRDVTIKELAANIGIGENSIYRWDKTSPASDKLQKVADYFDVSTDYLLGRTEKKKYYELSDKEKKDIAIQAEELIEGIANGENLNFYGEPATKDQKDRLLIAIRTAMEMNKEEAKQKFTRKDYRD
Sequence
>15604..16032
EnterococcusaviumMSYYVDDAFDKIIKKYRPFNVYELIREAHCKLLYADLDDETGGCTLTSHRCHTIIVNVNWPEWYQKFVILHEFSHIKMHGGSTTPFYRSVGLDSFISKMECEANSLAMKLLIYMQDKDDLNGLTEFQIMDYLGLPHELIRYL
Sequence
>16102..16416
EnterococcusaviumMQHQEFKEWLEQNTRGHEIFIIKAMESRKEKNKKRSGKTKKWTDRQMERQVESMWADVVKNAYEQIKTHKGVPKFNGYQIWLDFFAENDYVENFDDSMAELEIP
Sequence
>16447..17583
EnterococcusaviumMIKQYQKKNGDKAWYFKTYLGINPLTGKKQYTTKRGFKTKKEAKIALAKLELQAKDNKYTPQSNMTFGEVADKWLKSYKNTVKESSYSRVYTIFQSNILPHFKEKRISKINIPYCQNIVNEWYQEYKTYKAIRSYTSAVFDYAKELRLIDDNPMEHVPVPKKKKEVIKEKKFFEKEELERFLKCCSEDSYPLTYPLFRLLSFTGIRKGELLALTWNDIDFDNKTLDINKTSARNYNGRPIITDPKNHSSNRRISLDNETIKVLKKWRIDQRKYLLSYGINSLAPNQLVFSSKSNQILDHARINRILSRICKANNFEDIKVHGLRHTHCSLLFEAGLSIQEVQYRLGHSNARTTLEIYSHVTKNQQEKSAEKFAKYINF
Sequence
>complement(17663..19219)
EnterococcusaviumMLVPILLAIIGLIVGLGLGFMVAKARHEKEIDGAQNTARGIITHANKEAETLKKEALLEAKEENQQYRAQVESELKESRQELKSQENRLLQREQTLDRKDDSLEKREHSLEEKETKISARQQLIDEREKDVEQLINEQQTKLEQVASLTKDEAKEVIMKRTEEELNHELTVMVKESEQRAKEEADRKAKNLLAMAIQRCGADAVSETTVSVVTLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVVLSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVEKSRKEMDERIREYGEQAAFEVGAHTLHPDLIKILGRLHFRTSYGQNVLNHSIEVAKLTGVLAAELGENVQLAQRAGLLHDIGKALDHEIEGSHVEIGAELAAKYRENPVVINAIASHHGDTEATSVISVLVAAADAVSAARPGARSESLENYIRRLENLENISNSFDGVDSSFAVQAGREVRVMVKPEEISDLDSVRLVRDIRRRIEDELDYPGHIKVVVIRETRATDYAK
Sequence
>19462..19474
TGATTTGTTTTTT
Sequence
>complement(19473..20522)
EnterococcusaviumMANDRKAALDAAMKKIEKNYGKGSIMKLGEKVDQQISTIPSGSLALDVALGVGGYPRGRIIEVYGPESSGKTTVALHAIAEVQKHGGTAAFIDAEHALDPQYAQRLGVNIDELLLSQPDTGEQGLEIADALVSSGAVDIIVIDSVAALVPRAEIDGEMGDAHVGLQARLMSQALRKLSGSINKTKTIAVFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQLKNGTDIVGNRTKIKVVKNKVAPPFKVAEVDIMYGFGISQEGELLDMAVEQDIVDKSGAWYGYKEDRIGQGRENAKKYLADHPEMMAEVATRVRAAYGIGEEGDVTEAEEAGQEELPLDE
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
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Questionable (score 70-90)
Incomplete (score < 70)
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Length: 44678 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: attL (Region 1)
Locus: attLORF Start: 876
ORF Stop: 888
Strand: Forward
Protein Sequence: TGATTTGTTTTTT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: GM534_13245 (Region 1)
Locus: GM534_13245ORF Start: 1325
ORF Stop: 1822
Strand: Backward
Protein Sequence: MEIQVHELPESQLDMIAEKVVARLVEATKQRRKELRSNSYHNTRTLLRNYYRLKTHCKIVEEQVEEDFASMWNDWRFDVDSLLEHKAKTAKLMKHVDKALVELKAEDERAYDILNMKYLLPKCFADEYIASKYAVDRRTIGKWIKKAVEQLSVFIFGVDVVIDWL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13245, hypothetical protein, phage(gi725950543), PHAGE_Entero_EFC_1_NC_025453
Homolog/Ortholog E-Value: 3.70e-14
Locus 3: GM534_13250 (Region 1)
Locus: GM534_13250ORF Start: 1961
ORF Stop: 2152
Strand: Backward
Protein Sequence: MKDEFMVRYTNKHGFGCTLVVYAATMFEAKEKAEKELGDYLKSINEIVNCSFARKLIRSQDFE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13250, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: GM534_13255 (Region 1)
Locus: GM534_13255ORF Start: 2164
ORF Stop: 2529
Strand: Backward
Protein Sequence: MKTQSEIQKENVAELLNLIKENPDLPIVPMVDSEIVASDEHTNWLGSFGKAEIDYVWDNGERIYFKSNDEEDLLEKEFDLIYDEIFSNNVEPDPAIINQMATTRVNEYEWEKSIVVYIGLP
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13255, hypothetical protein, phage(gi100022), PHAGE_Lister_LP_HM00113468_NC_049900
Homolog/Ortholog E-Value: 5.46e-06
Locus 5: GM534_13260 (Region 1)
Locus: GM534_13260ORF Start: 2529
ORF Stop: 2936
Strand: Backward
Protein Sequence: MIPNFKAWDKYHEMIVSIISIDFENKIAYVEQENGDRYDIHFDNLIFLQSTGLKDKNGVEIFEGDIVKVSVHNGFDYYDNEVCVVRKSRFHSGLVCINPNNDMECRIFNQDVLEDYQYEVIGNIYENPELLEVES
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GM534_13260, YopX superfamily protein, phage(gi281416516), PHAGE_Entero_phiFL2A_NC_013643
Homolog/Ortholog E-Value: 3.35e-16
Locus 6: GM534_13265 (Region 1)
Locus: GM534_13265ORF Start: 3260
ORF Stop: 3709
Strand: Backward
Protein Sequence: MLQAIFTLRRKGFNKKIKVGEIFNYKDEKYVLTHIVEIKHFYSSSARMEVEGVAQLVGGKSDFSQYERTSEFVRKYPKGEFTEENPLYRVGDIFVFDGICGEITNLESIEFEFVDLVVTYHSRLFQPWSDEEMSQAVKEDRLSKFKVIG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13265, hypothetical protein, phage(gi384519770), PHAGE_Entero_EF62phi_NC_017732
Homolog/Ortholog E-Value: 3.86e-23
Locus 7: GM534_13270 (Region 1)
Locus: GM534_13270ORF Start: 3748
ORF Stop: 3954
Strand: Backward
Protein Sequence: MIKFKEFNTQPYDVHVQAFLKKESENNPDDIFEYVDLKAIDTRLVILVYRQTNKAAYQLRTLSKSLNK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13270, hypothetical protein, phage(gi281416354), PHAGE_Entero_phiFL1A_NC_013646
Homolog/Ortholog E-Value: 2.70e-24
Locus 8: GM534_13275 (Region 1)
Locus: GM534_13275ORF Start: 3951
ORF Stop: 4214
Strand: Backward
Protein Sequence: MNIRVELLARIEKSVKDEFAFGNESIPQSHWYNIEKRYESTGELGTLIQITQFTDNRRAQAVVLMDSGEFVEVDGLDTIRALEEVAE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13275, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: GM534_13280 (Region 1)
Locus: GM534_13280ORF Start: 4375
ORF Stop: 4554
Strand: Backward
Protein Sequence: MNKQEVLDELQKKYDEAIEAQERCLVGYGMWQAYENRAIAYSNAISIVHHLNEREQVRE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13280, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 10: GM534_13285 (Region 1)
Locus: GM534_13285ORF Start: 4564
ORF Stop: 5100
Strand: Backward
Protein Sequence: MEKQDLIKEINKEKYDFSKPETSLNRSDYKEGYNDACDDILDIIFKQLDEPQKVKVPEFVVEWFKENKHNLNFAIYELCEAGKVPVDLYEGLTDFERWFYLNHDIDTLIRMQDGYEVEQEQKWKIINDQKYCLTSIEAGYGNSLHWAFDSTKKKPILFDNEETALYTAYITGGTVEKV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13285, hypothetical protein, phage(gi971766806), PHAGE_Entero_EFLK1_NC_029026
Homolog/Ortholog E-Value: 4.22e-18
Locus 11: GM534_13290 (Region 1)
Locus: GM534_13290ORF Start: 5133
ORF Stop: 5891
Strand: Backward
Protein Sequence: MRALSLFSGIGGLDLAAEWAGIETVAFCENADFPKKILMKQWPTVPQFEDVKQLNIKTLESSGIDARTIGIIHGGFPCQPFSLAGKGKAENDDRYLWHEFARLVKEIRPRWVVGENVPGILNRGLETTVSDLEKEGYEVWVFSVAASDIGAIHKRQRFFIVACNTHSQSIIQEDSPTCTFRSERQAWQSSSWKYWREFRELHRKVPEPGICRVDDGVSRELDKNRLIALGNAVQPQQVYPIFKAIMEIENGS
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: GM534_13290, tail length tape-measure protein, phage(gi100057), PHAGE_Paenib_Jacopo_NC_048718
Homolog/Ortholog E-Value: 3.22e-56
Locus 12: GM534_13295 (Region 1)
Locus: GM534_13295ORF Start: 5926
ORF Stop: 6249
Strand: Backward
Protein Sequence: MIEKTPLYINGEQIGDCLTVKLSQDQNGFETRYVYHVEEFDKKIPELNERQQLFLKDLEWMWSERDQYDLSSKTSAVFEVLDSDFDYEVYGTEIDDVVKIFMSEKIQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13295, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 13: GM534_13300 (Region 1)
Locus: GM534_13300ORF Start: 6246
ORF Stop: 6449
Strand: Backward
Protein Sequence: MNENKTLAIYFENGSTAFFERVENFKYDNVHDITIEFDYFGIRSQVKRHAVFNFDVIAGYALQEDGE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13300, hypothetical protein, phage(gi281416353), PHAGE_Entero_phiFL1A_NC_013646
Homolog/Ortholog E-Value: 2.83e-07
Locus 14: GM534_13305 (Region 1)
Locus: GM534_13305ORF Start: 6477
ORF Stop: 6695
Strand: Backward
Protein Sequence: MENIKERNIMKRVKYFDEENPMKLEREINEFLSETNVSFVDIKFQSEKSSEGYGEEILHSVFLIYEEPAIGQ
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: GM534_13305, sporulation protein Cse60
Homolog/Ortholog E-Value: N/A
Locus 15: GM534_13310 (Region 1)
Locus: GM534_13310ORF Start: 6704
ORF Stop: 6904
Strand: Backward
Protein Sequence: MRSIYQVTFSKKDNKMTWVKAVVATSEENAKKVFAEENQFEEIKGVRILGNVVDELMDDGIGFENE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13310, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 16: GM534_13315 (Region 1)
Locus: GM534_13315ORF Start: 6938
ORF Stop: 7258
Strand: Backward
Protein Sequence: MDMTELNIYGIKCDNPECDYKNMDVKYEEYPQWLNKECPDCGANLLTEQDLESTKELIEMVKAANRFAKDIGLNDLELPKTPKVALPVEMNGTGKISFGKARIVED
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13315, hypothetical protein, phage(gi472341799), PHAGE_Sulfit_pCB2047_C_NC_020856
Homolog/Ortholog E-Value: 3.09e-05
Locus 17: GM534_13320 (Region 1)
Locus: GM534_13320ORF Start: 7267
ORF Stop: 7470
Strand: Backward
Protein Sequence: MLNVERINERLVEKHMTEYRLAKIINTSTAHITQLMAGSIKDPRFELVCKIADALEITVDELRKKVS
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: GM534_13320, tail assembly protein, phage(gi100053), PHAGE_Clostr_CDKM9_NC_048642
Homolog/Ortholog E-Value: 1.51e-06
Locus 18: GM534_13325 (Region 1)
Locus: GM534_13325ORF Start: 7620
ORF Stop: 8385
Strand: Backward
Protein Sequence: MEMKEQFINAVVRNMEPELEAKQLRKLKIVLTINLEKLRLEEECRDVIIYDETSDIAAYKQYFVSMKLRGLAPGTINLAMRTIDKFNRWVRVSFNDVTTNDIRLYIANREMNDHLSSATLDRERGAICRFFKWLFEEEYISRDPGRRVEKIKVEKRLKKAFTPVEVELMRNACRKPKEKATFELLLSTGCRVTELTMLTMENYDQQRGTITSAKKRYEPERCQTFPWAHGRRYDASVYRHNRFRPETRTKVRRLA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13325, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 19: GM534_13330 (Region 1)
Locus: GM534_13330ORF Start: 8411
ORF Stop: 8887
Strand: Backward
Protein Sequence: MSRRKSTEQQEAWSELLLLINDPEWYMDKQKSKRHKQLMLIIENEEDLTISEKNDIRYQRYVDARPGMEEDIVELLKQEMPVSKLREKYRIDPRVFAYLRRKHKIKKYQRLQVPSKEELEETYREGGWKAAAEKYKASQPTVYYWMKKYGIERNHMRS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13330, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 20: GM534_13335 (Region 1)
Locus: GM534_13335ORF Start: 8898
ORF Stop: 9371
Strand: Backward
Protein Sequence: MINNVVLVGRLTKDPDLRYTASGTGVATFTLAVNRNFTNQDGNRDADFINCVIWRKSAETLANYAKKGTLLGVIGRIQTRSYENQQGQRVYVTEVVAENFQLLESRSASDQRQNTNASTNSSGNYDQSNKNSVPDFGRDNDPFSGSSIDIGDDDLPF
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GM534_13335, single-stranded DNA binding protein, phage(gi238801886), PHAGE_Strept_5093_NC_012753
Homolog/Ortholog E-Value: 1.50e-65
Locus 21: GM534_13340 (Region 1)
Locus: GM534_13340ORF Start: 9368
ORF Stop: 10285
Strand: Backward
Protein Sequence: MAEISWIKLKTTMFDDEKIRLIQAVPEADAILVIWIRLLVLAGKTNDDGLIYIQRNMPYTEEMLATLFDKPVNTVRLALTTLEGFNMIDLNTDGSIAITNWEKHQNVEGLEKIREQNRLRAKRHYEKKKNSNVSLTLDVTQPNATDIDIEIDKEKDIKEDSRKSRKRIYDDDSPYLQLAKHLYKKINNNGPIKKPNFQTWADDIRKMVELDERDIGKVGRMIEWCQKDSFWSSNILSAKKLREKYDVMARQANRKPERAYNKPKGRVEELPPHIAEPPKNVEISPEKQAELDRKLAEYLNKEENG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GM534_13340, putative phage replisome organizer, phage(gi282598734), PHAGE_Entero_phiEf11_NC_013696
Homolog/Ortholog E-Value: 1.46e-62
Locus 22: GM534_13345 (Region 1)
Locus: GM534_13345ORF Start: 10290
ORF Stop: 10931
Strand: Backward
Protein Sequence: MIGKVVSMNGRSVEIELEEAFNQEYLRLLANGGDNYLGVTALDNRGISPKQNALSHALIADIAHWSGDIPVFIEQYLKYEYMGISGEWFEHHNATKSTARQWVNFLIEFVLANNVPLPKIYEYLLQENAWFYQCLKYRRCCICLEQADVAHVETVGMGRNRRKINHSDYRFMALCRRHHSEQHTIGLTEFLEKYVIILVKLNDEDRKKLHIGG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13345, hypothetical protein, phage(gi557308025), PHAGE_Lactob_PL_1_NC_022757
Homolog/Ortholog E-Value: 1.41e-39
Locus 23: GM534_13350 (Region 1)
Locus: GM534_13350ORF Start: 10928
ORF Stop: 11893
Strand: Backward
Protein Sequence: MTTNGLAVTDIQFAVNYTPSKITIENEDQLDQLINQVTEHYGAQVFSDSNIPEAKEARAQLNKYIKAMEDRRKEIKREFTKPLTQFESVMKGYVEKITTISDDIGEGIKKYDEEQKAIRLEKIQAEMEKLAELFNVEPNVVEVHSNWLAKSAFTTKGEVRPKIIDEIKDKMKIIAMERERIAADKATVTDYAELAGLDPYAWSNLIEQGWSVADIREKIKQAVEDKRIRGEQAEQQRIAKQEHDAALAKLAEEQAMQQAKETDSGALYDPNTGELIATNEEAVSTAPELITAVLQLTGTIDQMNDLNQYIVDHNIKVVPVQ
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GM534_13350, putative replication protein, phage(gi282598768), PHAGE_Entero_phiEf11_NC_013696
Homolog/Ortholog E-Value: 4.78e-67
Locus 24: GM534_13355 (Region 1)
Locus: GM534_13355ORF Start: 11890
ORF Stop: 12633
Strand: Backward
Protein Sequence: MTEEKKNVESGLMHKLVEITQAVERIPKNGHNKHQNYDYALESDIKDVVRKEMANRNLMMIPNELSRTMTQIPTRNGSQQLVTLEIEFTVNDADSGEAFKMVGYGDGQDSGDKAVYKAKTGALKYALTSLFMIPTGDDPEKPLQPPKVIDKEQLQAIEELIDHVANLSNANSVNVIGTLKTEIKLEKELKDMNESEFGIALQKLQSWKKQYLQRQQQENQNQDSNRQQQNYQQQNPTNQNIPWGQRQ
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: GM534_13355, tail assembly protein, phage(gi100053), PHAGE_Geobac_TP_84_NC_041918
Homolog/Ortholog E-Value: 1.02e-23
Locus 25: GM534_13360 (Region 1)
Locus: GM534_13360ORF Start: 12885
ORF Stop: 13412
Strand: Forward
Protein Sequence: MKSSDWIQVIAICLTLIVSVISIVQSNRSIKLTEKTIEESNRPYVSAYVDIIDTTFFAKYLVLKNFGNTMATISKLTFEGLEEDQVNRNRQMKSLVGGSIAPNQKFSTAVEPDFRGNVIVQITYSDTQGKTYKDIFHLYFGQTTDMMWQKDTSKNRSEEAKAINNAAHAIVKTLK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GM534_13360, u-spanin, phage(gi100032), PHAGE_Strept_phiARI0131_2_NC_031941
Homolog/Ortholog E-Value: 7.00e-27
Locus 26: GM534_13365 (Region 1)
Locus: GM534_13365ORF Start: 13700
ORF Stop: 14413
Strand: Backward
Protein Sequence: MTDLVIMKDRQAVTTSLNLAESFEKEHKNVIQVIESKIQSAENSAHYKKMFALGSYVDSRGREQKMYYMNRDGWTFIAVGFTGKKADSFKLKYIEAFNQMEDQIKQQVKIPTTPRDLALLALSAGEETNQRVDELDTRVADLEENTVLSAGDYGYISRRINQRVSEVARGFGKLTQEQRGKLHKDINSGVKAVTGVSTRTQLRNRHYETVLDFINDWEPSTATKMQVRQMSLDLETA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GM534_13365, anti-repressor protein, phage(gi281416331), PHAGE_Entero_phiFL1A_NC_013646
Homolog/Ortholog E-Value: 3.07e-94
Locus 27: GM534_13370 (Region 1)
Locus: GM534_13370ORF Start: 14426
ORF Stop: 14731
Strand: Backward
Protein Sequence: MKTVQVNNEFFIPDEILHQIADITADIVLEKIKDQLDIWDKIIDLPPTPSKSQIMKTLGIGNDTLNFLIANGATPMVWGENTVRIERSDLRKAFEKTKIAM
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13370, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 28: GM534_13375 (Region 1)
Locus: GM534_13375ORF Start: 14734
ORF Stop: 14937
Strand: Backward
Protein Sequence: MVSIVANIKSIAKEKELTIKQIGKDSGVGANAIYRWDKQNPNLASLKKVSNYLNVPIEELLDEKQEV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GM534_13375, DNA-binding helix-turn-helix protein, phage(gi971821252), PHAGE_Bacill_phi4B1_NC_028886
Homolog/Ortholog E-Value: 8.15e-10
Locus 29: GM534_13380 (Region 1)
Locus: GM534_13380ORF Start: 15175
ORF Stop: 15588
Strand: Forward
Protein Sequence: MNTLDRIKLLAKQRDVTIKELAANIGIGENSIYRWDKTSPASDKLQKVADYFDVSTDYLLGRTEKKKYYELSDKEKKDIAIQAEELIEGIANGENLNFYGEPATKDQKDRLLIAIRTAMEMNKEEAKQKFTRKDYRD
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GM534_13380, DNA-binding helix-turn-helix protein, phage(gi971821252), PHAGE_Bacill_phi4B1_NC_028886
Homolog/Ortholog E-Value: 3.13e-42
Locus 30: GM534_13385 (Region 1)
Locus: GM534_13385ORF Start: 15604
ORF Stop: 16032
Strand: Forward
Protein Sequence: MSYYVDDAFDKIIKKYRPFNVYELIREAHCKLLYADLDDETGGCTLTSHRCHTIIVNVNWPEWYQKFVILHEFSHIKMHGGSTTPFYRSVGLDSFISKMECEANSLAMKLLIYMQDKDDLNGLTEFQIMDYLGLPHELIRYL
Homolog/Ortholog Species: Fiber protein
Homolog/Ortholog Protein: GM534_13385, tail fiber protein, phage(gi100052), PHAGE_Anoxyb_A403_NC_048701
Homolog/Ortholog E-Value: 8.81e-12
Locus 31: GM534_13390 (Region 1)
Locus: GM534_13390ORF Start: 16102
ORF Stop: 16416
Strand: Forward
Protein Sequence: MQHQEFKEWLEQNTRGHEIFIIKAMESRKEKNKKRSGKTKKWTDRQMERQVESMWADVVKNAYEQIKTHKGVPKFNGYQIWLDFFAENDYVENFDDSMAELEIP
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: GM534_13390, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 32: GM534_13395 (Region 1)
Locus: GM534_13395ORF Start: 16447
ORF Stop: 17583
Strand: Forward
Protein Sequence: MIKQYQKKNGDKAWYFKTYLGINPLTGKKQYTTKRGFKTKKEAKIALAKLELQAKDNKYTPQSNMTFGEVADKWLKSYKNTVKESSYSRVYTIFQSNILPHFKEKRISKINIPYCQNIVNEWYQEYKTYKAIRSYTSAVFDYAKELRLIDDNPMEHVPVPKKKKEVIKEKKFFEKEELERFLKCCSEDSYPLTYPLFRLLSFTGIRKGELLALTWNDIDFDNKTLDINKTSARNYNGRPIITDPKNHSSNRRISLDNETIKVLKKWRIDQRKYLLSYGINSLAPNQLVFSSKSNQILDHARINRILSRICKANNFEDIKVHGLRHTHCSLLFEAGLSIQEVQYRLGHSNARTTLEIYSHVTKNQQEKSAEKFAKYINF
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: GM534_13395, integrase, phage(gi23097608), PROPHAGE_Oceano_HTE831
Homolog/Ortholog E-Value: 3.82e-89
Locus 33: GM534_13400 (Region 1)
Locus: GM534_13400ORF Start: 17663
ORF Stop: 19219
Strand: Backward
Protein Sequence: MLVPILLAIIGLIVGLGLGFMVAKARHEKEIDGAQNTARGIITHANKEAETLKKEALLEAKEENQQYRAQVESELKESRQELKSQENRLLQREQTLDRKDDSLEKREHSLEEKETKISARQQLIDEREKDVEQLINEQQTKLEQVASLTKDEAKEVIMKRTEEELNHELTVMVKESEQRAKEEADRKAKNLLAMAIQRCGADAVSETTVSVVTLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVVLSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVEKSRKEMDERIREYGEQAAFEVGAHTLHPDLIKILGRLHFRTSYGQNVLNHSIEVAKLTGVLAAELGENVQLAQRAGLLHDIGKALDHEIEGSHVEIGAELAAKYRENPVVINAIASHHGDTEATSVISVLVAAADAVSAARPGARSESLENYIRRLENLENISNSFDGVDSSFAVQAGREVRVMVKPEEISDLDSVRLVRDIRRRIEDELDYPGHIKVVVIRETRATDYAK
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: GM534_13400, ribonuclease Y
Homolog/Ortholog E-Value: N/A
Locus 34: attR (Region 1)
Locus: attRORF Start: 19462
ORF Stop: 19474
Strand: Forward
Protein Sequence: TGATTTGTTTTTT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 35: GM534_13405 (Region 1)
Locus: GM534_13405ORF Start: 19473
ORF Stop: 20522
Strand: Backward
Protein Sequence: MANDRKAALDAAMKKIEKNYGKGSIMKLGEKVDQQISTIPSGSLALDVALGVGGYPRGRIIEVYGPESSGKTTVALHAIAEVQKHGGTAAFIDAEHALDPQYAQRLGVNIDELLLSQPDTGEQGLEIADALVSSGAVDIIVIDSVAALVPRAEIDGEMGDAHVGLQARLMSQALRKLSGSINKTKTIAVFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQLKNGTDIVGNRTKIKVVKNKVAPPFKVAEVDIMYGFGISQEGELLDMAVEQDIVDKSGAWYGYKEDRIGQGRENAKKYLADHPEMMAEVATRVRAAYGIGEEGDVTEAEEAGQEELPLDE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: GM534_13405, RecA, phage(gi971821630), PHAGE_Bacill_phi4J1_NC_029008
Homolog/Ortholog E-Value: 2.09e-156
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download