Submission Results

Sequence Name: Not Available

GenBank Accession Number: WUQC01000001.1

GenInfo (GI) Number: 0000000000

Download Results: WUQC01000001.1.PHASTER.zip

gi|00000000|ref|WUQC01000001.1| Salmonella enterica strain 15E434 chromosome, whole genome shotgun 5006850, gc%: 52.18%

Download summary as .txt file: summary.txt file_download

Total: 10 prophage regions have been identified, of which 5 regions are intact, 2 regions are incomplete, and 3 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
134.6Kbintact13040665909-700563 info_outlinePHAGE_Haemop_HP1_NC_001697(18)50.12%Show info_outline
252.3Kbintact150661278522-1330884 info_outlinePHAGE_Phage_Gifsy_1_NC_010392(54)51.35%Show info_outline
314.2Kbquestionable90171714952-1729207 info_outlinePHAGE_Salmon_118970_sal3_NC_031940(7)47.49%Show info_outline
458Kbintact140681966466-2024494 info_outlinePHAGE_Salmon_118970_sal3_NC_031940(92)49.95%Show info_outline
513.9Kbquestionable70212128484-2142428 info_outlinePHAGE_Phage_Gifsy_2_NC_010393(3)46.38%Show info_outline
639.2Kbintact150522958048-2997343 info_outlinePHAGE_Phage_Gifsy_2_NC_010393(36)49.79%Show info_outline
77.6Kbincomplete4063066832-3074448 info_outlinePHAGE_Agroba_Atu_ph07_NC_042013(2)52.16%Show info_outline
823.5Kbincomplete30113689863-3713389 info_outlinePHAGE_Entero_phiP27_NC_003356(2)50.05%Show info_outline
960.5Kbintact150654542379-4602913 info_outlinePHAGE_Salmon_118970_sal3_NC_031940(40)51.73%Show info_outline
1020.4Kbquestionable80264613871-4634290 info_outlinePHAGE_Burkho_BcepMu_NC_005882(16)50.59%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|WUQC01000001.1| Salmonella enterica strain 15E434 chromosome, whole genome shotgun 5006850, gc%: 52.18%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 43 CDS

#CDS PositionBLAST HitE-ValueSequence
1665909..665953attL0.0Showinfo_outline
2complement(667858..668895)PHAGE_Erwini_ENT90_NC_019932: phage integrase family protein; FDG16_03205; phage(gi431810942)3.78e-155Showinfo_outline
3complement(668899..669465)PHAGE_Staphy_X2_NC_007065: ORF015; FDG16_03210; phage(gi66394685)3.23e-25Showinfo_outline
4complement(669482..670063)PHAGE_Haemop_HP2_NC_003315: cI repressor; FDG16_03215; phage(gi17981818)1.22e-26Showinfo_outline
5670207..670428PHAGE_Pseudo_phi3_NC_030940: DNA topoisomerase medium subunit; FDG16_03220; phage(gi100004)9.14e-06Showinfo_outline
6670459..670962PHAGE_Salmon_RE_2010_NC_019488: regulatory protein; FDG16_03225; phage(gi418489686)1.33e-47Showinfo_outline
7670972..671199DUF2724 domain-containing protein; FDG16_032300.0Showinfo_outline
8671189..671614hypothetical protein; FDG16_032350.0Showinfo_outline
9671614..672015hypothetical protein; FDG16_032400.0Showinfo_outline
10672083..672316PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; FDG16_03245; phage(gi169936057)1.38e-06Showinfo_outline
11672307..673167PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; FDG16_03250; phage(gi169936055)4.07e-84Showinfo_outline
12673164..675185PHAGE_Salmon_SEN5_NC_028701: replication protein; FDG16_03255; phage(gi966201551)2.75e-154Showinfo_outline
13675305..675511hypothetical protein; FDG16_032600.0Showinfo_outline
14complement(675485..675808)PHAGE_Vibrio_K139_NC_003313: zinc-finger protein; FDG16_03265; phage(gi17975123)9.57e-26Showinfo_outline
15complement(675805..676866)PHAGE_Haemop_HP2_NC_003315: portal vertex protein; FDG16_03270; phage(gi17981829)5.76e-101Showinfo_outline
16complement(676863..678638)PHAGE_Haemop_HP2_NC_003315: terminase ATPase subunit; FDG16_03275; phage(gi17981830)0.0Showinfo_outline
17678799..679602PHAGE_Haemop_HP2_NC_003315: capsid-scaffolding protein; FDG16_03280; phage(gi17981831)1.40e-42Showinfo_outline
18679664..680686PHAGE_Aeromo_phiO18P_NC_009542: capsid protein; FDG16_03285; phage(gi148727153)9.35e-115Showinfo_outline
19680690..681391PHAGE_Aeromo_phiO18P_NC_009542: terminase endonuclease subunit; FDG16_03290; phage(gi148727154)6.75e-67Showinfo_outline
20681452..681940PHAGE_Haemop_HP2_NC_003315: packaging protein; FDG16_03295; phage(gi17981834)3.21e-31Showinfo_outline
21681937..682443PHAGE_Haemop_HP2_NC_003315: orf21; FDG16_03300; phage(gi17981835)8.90e-15Showinfo_outline
22682440..683147PHAGE_Haemop_HP2_NC_003315: orf22; FDG16_03305; phage(gi17981836)2.91e-12Showinfo_outline
23683144..684271PHAGE_Haemop_HP2_NC_003315: tail sheath; FDG16_03310; phage(gi17981837)7.35e-139Showinfo_outline
24684268..684723PHAGE_Aeromo_phiO18P_NC_009542: putative tail tube protein; FDG16_03315; phage(gi148727159)1.02e-63Showinfo_outline
25684733..685026PHAGE_Burkho_KS9_NC_013055: holin gp22; FDG16_03320; phage(gi255033753)6.34e-20Showinfo_outline
26685023..685364PHAGE_Pseudo_PaP2_NC_005884: hypothetical protein; FDG16_03325; phage(gi48697087)4.94e-32Showinfo_outline
27685364..685696PHAGE_Erwini_phiEa21_4_NC_011811: hypothetical protein; FDG16_03330; phage(gi219681271)2.05e-11Showinfo_outline
28685668..685856PHAGE_Entero_NJ01_NC_018835: hypothetical protein; FDG16_03335; phage(gi410490876)6.16e-06Showinfo_outline
29685843..686100PHAGE_Haemop_HP2_NC_003315: orf26; FDG16_03340; phage(gi17981842)1.61e-18Showinfo_outline
30686288..688258PHAGE_Haemop_HP2_NC_003315: orf27; FDG16_03345; phage(gi17981843)3.70e-82Showinfo_outline
31688255..688584PHAGE_Haemop_HP2_NC_003315: orf28; FDG16_03350; phage(gi17981844)4.63e-35Showinfo_outline
32688581..689765PHAGE_Haemop_HP2_NC_003315: orf29; FDG16_03355; phage(gi17981845)5.10e-147Showinfo_outline
33689758..690345PHAGE_Haemop_HP2_NC_003315: orf30; FDG16_03360; phage(gi17981846)3.53e-59Showinfo_outline
34690355..692589PHAGE_Salmon_ST64B_NC_004313: tail protein; FDG16_03365; phage(gi23505468)0.0Showinfo_outline
35692602..693156PHAGE_Salmon_SP_004_NC_021774: tail fiber assembly protein; FDG16_03370; phage(gi526003632)2.09e-119Showinfo_outline
36693146..693871PHAGE_Haemop_HP2_NC_003315: orf33; FDG16_03375; phage(gi17981849)8.12e-15Showinfo_outline
37693843..694388PHAGE_Haemop_HP2_NC_003315: orf34; FDG16_03380; phage(gi17981850)4.00e-32Showinfo_outline
38694391..696091PHAGE_Haemop_HP2_NC_003315: orf35; FDG16_03385; phage(gi17981851)7.12e-155Showinfo_outline
39697460..697762reverse transcriptase; FDG16_033900.0Showinfo_outline
40complement(697885..697960)tRNA0.0Showinfo_outline
41697885..697929attR0.0Showinfo_outline
42698086..698592G/U mismatch-specific DNA glycosylase; FDG16_034000.0Showinfo_outline
43complement(698716..700563)PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; FDG16_03405; phage(gi331028036)4.75e-37Showinfo_outline

Region 2, total 69 CDS

#CDS PositionBLAST HitE-ValueSequence
11278522..1279097PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; FDG16_06220; phage(gi712913000)1.52e-09Showinfo_outline
21279129..1279779anti-sigma-E factor RseA; FDG16_062250.0Showinfo_outline
31279779..1280735sigma-E factor regulatory protein RseB; FDG16_062300.0Showinfo_outline
41280732..1281211SoxR-reducing system protein RseC; FDG16_062350.0Showinfo_outline
51281462..1281474attL0.0Showinfo_outline
61281709..1282938PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; FDG16_06240; phage(gi169257266)0.0Showinfo_outline
7complement(1282916..1283200)PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; FDG16_06245; phage(gi169257265)2.94e-64Showinfo_outline
8complement(1283241..1283480)PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; FDG16_06250; phage(gi169257264)1.38e-52Showinfo_outline
9complement(1283523..1284680)PHAGE_Phage_Gifsy_1_NC_010392: RecT; FDG16_06255; phage(gi169257263)0.0Showinfo_outline
10complement(1284643..1287568)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; FDG16_06260; phage(gi169257262)0.0Showinfo_outline
11complement(1287695..1288045)PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; FDG16_06265; phage(gi169257261)2.14e-82Showinfo_outline
12complement(1288067..1288225)PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; FDG16_06270; phage(gi169257260)1.82e-31Showinfo_outline
13complement(1288624..1289028)PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; putative repressor protein; helix-turn-helix motif; FDG16_06275; phage(gi169257258)3.00e-18Showinfo_outline
141289158..1289394PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; FDG16_06280; phage(gi169257257)6.68e-17Showinfo_outline
151289360..1289734PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; FDG16_06285; phage(gi169257256)1.07e-87Showinfo_outline
161289819..1290802PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage replication protein O; FDG16_06290; phage(gi169257255)0.0Showinfo_outline
171290805..1291554PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; FDG16_06295; phage(gi169257254)0.0Showinfo_outline
181291565..1291912PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; FDG16_06300; phage(gi169257253)4.28e-79Showinfo_outline
191291909..1292433PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; FDG16_06305; phage(gi169257252)5.29e-44Showinfo_outline
201292433..1292906PHAGE_Pectob_ZF40_NC_019522: putative methylase; FDG16_06310; phage(gi422936660)2.93e-85Showinfo_outline
211292910..1293185PHAGE_Salmon_SPN3UB_NC_019545: putative Eaa protein; FDG16_06315; phage(gi423262432)1.73e-28Showinfo_outline
221293771..1294010PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; FDG16_06320; phage(gi169257250)1.36e-49Showinfo_outline
231294000..1294305PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; FDG16_06325; phage(gi423262436)1.56e-53Showinfo_outline
241294345..1294947PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; FDG16_06330; phage(gi169257248)5.00e-147Showinfo_outline
251295156..1295767PHAGE_Phage_Gifsy_1_NC_010392: NinG; FDG16_06335; phage(gi169257246)1.02e-147Showinfo_outline
261295764..1295904PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; FDG16_06340; phage(gi169257245)5.71e-26Showinfo_outline
271295901..1296578PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; FDG16_06345; phage(gi169257244)2.69e-165Showinfo_outline
281296851..1297414PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; FDG16_06350; phage(gi169257243)1.97e-135Showinfo_outline
291297756..1297832tRNA0.0Showinfo_outline
301297921..1298109PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; FDG16_06360; phage(gi169257242)3.75e-40Showinfo_outline
31complement(1298324..1299010)PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; FDG16_06365; phage(gi169257241)7.18e-169Showinfo_outline
321299286..1299615PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; FDG16_06370; phage(gi169257240)1.13e-73Showinfo_outline
331299599..1300051PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; FDG16_06375; phage(gi169257239)2.07e-105Showinfo_outline
341300069..1300521PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; FDG16_06380; phage(gi169257238)5.57e-106Showinfo_outline
35complement(1300757..1301158)PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; FDG16_06385; phage(gi169257237)7.50e-93Showinfo_outline
361301445..1301990PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; FDG16_06390; phage(gi169257236)2.10e-115Showinfo_outline
371301962..1303893PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; FDG16_06395; phage(gi169257235)0.0Showinfo_outline
381303877..1304080PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; FDG16_06400; phage(gi169257234)4.65e-42Showinfo_outline
391304077..1305657PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; FDG16_06405; phage(gi169257233)0.0Showinfo_outline
401305647..1307143PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; FDG16_06410; phage(gi169257232)0.0Showinfo_outline
411307156..1307503PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; FDG16_06415; phage(gi169257231)2.53e-78Showinfo_outline
421307558..1308586PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; FDG16_06420; phage(gi169257230)0.0Showinfo_outline
431308644..1309003PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; FDG16_06425; phage(gi169257229)7.18e-80Showinfo_outline
441309014..1309397PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; FDG16_06430; phage(gi169257228)6.78e-87Showinfo_outline
451309425..1310003PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; FDG16_06435; phage(gi169257227)1.05e-135Showinfo_outline
46complement(1310052..1311182)PHAGE_Phage_Gifsy_1_NC_010392: transposase; FDG16_06440; phage(gi169257226)0.0Showinfo_outline
471311291..1311692PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; FDG16_06445; phage(gi169257225)2.90e-93Showinfo_outline
481311700..1312446PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; FDG16_06450; phage(gi169257224)5.43e-174Showinfo_outline
491312497..1312892PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; FDG16_06455; phage(gi169257223)2.51e-93Showinfo_outline
501312889..1313227PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; FDG16_06460; phage(gi169257222)1.77e-77Showinfo_outline
511313199..1316294PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; FDG16_06465; phage(gi169257221)0.0Showinfo_outline
521316297..1316626PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; FDG16_06470; phage(gi169257220)6.65e-77Showinfo_outline
531316636..1317334PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; FDG16_06475; phage(gi169257219)2.74e-174Showinfo_outline
541317341..1318078PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; FDG16_06480; phage(gi169257218)5.25e-148Showinfo_outline
551317976..1318623PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; FDG16_06485; phage(gi169257217)6.47e-156Showinfo_outline
561318685..1322047PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; FDG16_06490; phage(gi169257216)0.0Showinfo_outline
571322086..1322328PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; FDG16_06495; phage(gi169257215)1.32e-53Showinfo_outline
581322382..1324754PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; FDG16_06500; phage(gi169257214)0.0Showinfo_outline
591324751..1325575PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; FDG16_06505; phage(gi169257213)0.0Showinfo_outline
601325565..1326143PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; FDG16_06510; phage(gi169257212)5.79e-141Showinfo_outline
61complement(1326240..1326467)PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; FDG16_06515; phage(gi169257211)6.87e-51Showinfo_outline
621326574..1326786PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; FDG16_06520; phage(gi100036)3.13e-08Showinfo_outline
631326849..1326914DUF4113 domain-containing protein; FDG16_065250.0Showinfo_outline
64complement(1327278..1327464)PROPHAGE_Escher_CFT073: putative transposase; FDG16_06530; phage(gi26246170)2.33e-14Showinfo_outline
651327539..1327658PROPHAGE_Xantho_33913: ISxcd1 transposase; FDG16_06535; phage(gi21231544)6.43e-07Showinfo_outline
66complement(1327693..1328052)PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; FDG16_06540; phage(gi169257210)2.50e-82Showinfo_outline
67complement(1328371..1328508)hypothetical protein; FDG16_065450.0Showinfo_outline
68complement(1328987..1330480)PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; FDG16_06550; phage(gi169257209)0.0Showinfo_outline
691330884..1330896attR0.0Showinfo_outline

Region 3, total 17 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(1714952..1715155)PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; FDG16_08270; phage(gi428782403)2.21e-07Showinfo_outline
21715458..1716249PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; FDG16_08275; phage(gi169257320)3.48e-83Showinfo_outline
31716545..1716748phage tail protein; FDG16_082800.0Showinfo_outline
41716917..1719283PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; FDG16_08285; phage(gi169257322)2.16e-86Showinfo_outline
51719368..1719604PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FDG16_08290; phage(gi23505490)8.21e-52Showinfo_outline
61719612..1720601PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_08295; phage(gi100127)0.0Showinfo_outline
71720616..1720984PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; FDG16_08300; phage(gi148609434)4.66e-69Showinfo_outline
8complement(1721013..1722344)AAA family ATPase; FDG16_083050.0Showinfo_outline
91722641..1722970PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); FDG16_08310; phage(gi23505495)2.54e-20Showinfo_outline
101722984..1723427PHAGE_Entero_SfV_NC_003444: capsid protease; FDG16_08315; phage(gi19548994)1.43e-93Showinfo_outline
111723433..1723576PHAGE_Salmon_ST64B_NC_004313: putative tail protein; FDG16_08320; phage(gi23505467)3.76e-28Showinfo_outline
121723563..1724804PHAGE_Salmon_ST64B_NC_004313: tail protein; FDG16_08325; phage(gi23505468)4.38e-63Showinfo_outline
131724807..1725334PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; FDG16_08330; phage(gi100034)6.18e-15Showinfo_outline
141725712..1726155PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; FDG16_08335; phage(gi971758532)2.41e-37Showinfo_outline
15complement(1726209..1728038)PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; FDG16_08340; phage(gi255252697)3.17e-71Showinfo_outline
16complement(1728386..1728676)PHAGE_Klebsi_phiKO2_NC_005857: Gp22; FDG16_08345; phage(gi46402108)3.33e-34Showinfo_outline
171728704..1729207PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FDG16_08350; phage(gi100082)1.50e-66Showinfo_outline

Region 4, total 77 CDS

#CDS PositionBLAST HitE-ValueSequence
11966466..1966478attL0.0Showinfo_outline
2complement(1974297..1974764)PROPHAGE_Salmon_LT2: integrase; FDG16_09510; phage(gi16766072)5.15e-46Showinfo_outline
3complement(1975239..1975712)PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; FDG16_09515; phage(gi100007)1.32e-52Showinfo_outline
4complement(1975876..1975951)tRNA0.0Showinfo_outline
51975876..1975953attL0.0Showinfo_outline
6complement(1976360..1976650)PROPHAGE_Escher_Sakai: putative integrase; FDG16_09525; phage(gi15834507)3.32e-14Showinfo_outline
7complement(1976846..1976921)tRNA0.0Showinfo_outline
81976846..1976923attR0.0Showinfo_outline
9complement(1977022..1977819)DgsA anti-repressor MtfA; FDG16_095350.0Showinfo_outline
101977908..1977997tRNA0.0Showinfo_outline
111977986..1977998attL0.0Showinfo_outline
12complement(1978111..1979100)PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; FDG16_09545; phage(gi100105)0.0Showinfo_outline
13complement(1979102..1979344)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub assembly protein; FDG16_09550; phage(gi100106)4.38e-51Showinfo_outline
14complement(1979369..1979938)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; FDG16_09555; phage(gi100107)1.05e-140Showinfo_outline
15complement(1979942..1980523)PHAGE_Salmon_118970_sal3_NC_031940: baseplate wedge subunit; FDG16_09560; phage(gi100108)2.03e-143Showinfo_outline
16complement(1980534..1980791)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09565; phage(gi100109)8.08e-58Showinfo_outline
17complement(1980793..1981326)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09570; phage(gi100110)1.88e-131Showinfo_outline
18complement(1981397..1981936)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09575; phage(gi100111)2.57e-129Showinfo_outline
19complement(1982073..1982900)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09580; phage(gi100112)0.0Showinfo_outline
20complement(1982958..1983329)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09585; phage(gi100113)4.84e-85Showinfo_outline
211983869..1984093PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09590; phage(gi100114)1.54e-46Showinfo_outline
22complement(1984056..1984394)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09595; phage(gi100115)7.56e-78Showinfo_outline
23complement(1984600..1985295)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09600; phage(gi100116)4.81e-170Showinfo_outline
241985393..1985617PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09605; phage(gi100117)5.22e-49Showinfo_outline
251985646..1986200PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09610; phage(gi100118)4.84e-135Showinfo_outline
261986197..1987339PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09615; phage(gi100057)0.0Showinfo_outline
271987336..1987560PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09620; phage(gi100121)1.47e-50Showinfo_outline
281987557..1988531PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09625; phage(gi100059)0.0Showinfo_outline
291988528..1989001PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09630; phage(gi100059)9.01e-73Showinfo_outline
301988998..1989873PHAGE_Salmon_118970_sal3_NC_031940: thymidylate synthetase; FDG16_09635; phage(gi100061)0.0Showinfo_outline
311989882..1990271PHAGE_Salmon_118970_sal3_NC_031940: ribonucleotide reductase A subunit; FDG16_09640; phage(gi100062)3.18e-92Showinfo_outline
321990288..1991148PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09645; phage(gi100126)0.0Showinfo_outline
331991156..1992145PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09650; phage(gi100127)0.0Showinfo_outline
341992159..1992911PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09655; phage(gi100128)0.0Showinfo_outline
351993062..1993319PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09660; phage(gi100129)1.08e-56Showinfo_outline
361993465..1993851PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09665; phage(gi100130)6.27e-82Showinfo_outline
371993838..1994119PHAGE_Entero_mEp390_NC_019721: putative holin; FDG16_09670; phage(gi428782713)2.26e-26Showinfo_outline
381994119..1994733PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09675; phage(gi100131)1.54e-150Showinfo_outline
391994730..1995122PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09680; phage(gi100132)1.01e-92Showinfo_outline
401995585..1995917PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09685; phage(gi100133)5.28e-76Showinfo_outline
411995968..1996318PHAGE_Entero_SfI_NC_027339: HNH endonuclease; FDG16_09690; phage(gi849250284)2.78e-75Showinfo_outline
421996444..1996938PHAGE_Salmon_118970_sal3_NC_031940: co-chaperonin for GroEL; FDG16_09695; phage(gi100075)6.48e-106Showinfo_outline
431996935..1998668PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; FDG16_09700; phage(gi23505447)0.0Showinfo_outline
441998680..1998862PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09705; phage(gi100077)1.17e-33Showinfo_outline
451998862..2000103PHAGE_Shigel_SfIV_NC_022749: portal protein; FDG16_09710; phage(gi557307529)0.0Showinfo_outline
462000081..2000731PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09715; phage(gi100080)1.30e-151Showinfo_outline
472000746..2001951PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09720; phage(gi100081)0.0Showinfo_outline
482002001..2002201PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09725; phage(gi100082)4.15e-31Showinfo_outline
492002204..2002527PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09730; phage(gi100083)2.64e-68Showinfo_outline
502002524..2002928PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09735; phage(gi100084)1.84e-69Showinfo_outline
512002900..2003412PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09740; phage(gi100085)6.73e-106Showinfo_outline
522003409..2003966PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09745; phage(gi100086)4.57e-125Showinfo_outline
532003988..2004152PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09750; phage(gi100087)1.14e-29Showinfo_outline
542004142..2005638PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09755; phage(gi100088)0.0Showinfo_outline
552005638..2005994PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09760; phage(gi100089)1.20e-82Showinfo_outline
562005991..2006317PHAGE_Salmon_118970_sal3_NC_031940: DNA ligase; FDG16_09765; phage(gi100090)1.48e-73Showinfo_outline
572006402..2008327PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09770; phage(gi100091)0.0Showinfo_outline
582008344..2008793hypothetical protein; FDG16_097750.0Showinfo_outline
592008853..2010193PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09780; phage(gi100092)0.0Showinfo_outline
602010190..2011248PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09785; phage(gi100093)0.0Showinfo_outline
612011248..2011781PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09790; phage(gi100094)5.75e-128Showinfo_outline
622011786..2012199PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09795; phage(gi100095)4.62e-95Showinfo_outline
632012192..2013271PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09800; phage(gi100096)0.0Showinfo_outline
642013274..2013861PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09805; phage(gi100097)7.68e-145Showinfo_outline
652013848..2015410PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09810; phage(gi100098)0.0Showinfo_outline
662015380..2015985PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09815; phage(gi100099)1.39e-140Showinfo_outline
67complement(2016099..2016332)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_09820; phage(gi100100)1.16e-49Showinfo_outline
68complement(2016407..2016520)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; FDG16_09825; phage(gi100101)5.29e-18Showinfo_outline
69complement(2016568..2016981)PHAGE_Salmon_118970_sal3_NC_031940: baseplate distal hub subunit; FDG16_09830; phage(gi100102)2.23e-97Showinfo_outline
70complement(2016978..2017190)PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; FDG16_09835; phage(gi100103)7.46e-42Showinfo_outline
712017522..2017665PHAGE_Salmon_SEN5_NC_028701: tail fibers protein; FDG16_09840; phage(gi966201576)1.77e-18Showinfo_outline
722018070..2018082attR0.0Showinfo_outline
732018384..2018545hypothetical protein; FDG16_098450.0Showinfo_outline
742018672..2019091PHAGE_Escher_RCS47_NC_042128: hypothetical protein; FDG16_09850; phage(gi100117)5.51e-23Showinfo_outline
752019094..2020362PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; FDG16_09855; phage(gi399528790)0.0Showinfo_outline
762020817..2021029PHAGE_Lactoc_bIL312_NC_002671: Csp; FDG16_09860; phage(gi13095918)1.74e-21Showinfo_outline
772024494..2024506attR0.0Showinfo_outline

Region 5, total 23 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2128484..2129182)PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; FDG16_10450; phage(gi985760125)8.55e-19Showinfo_outline
2complement(2129206..2129862)carbon-nitrogen hydrolase family protein; FDG16_104550.0Showinfo_outline
3complement(2129970..2130200)PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; FDG16_10460; phage(gi422936677)8.51e-23Showinfo_outline
42130338..2130712CopC domain-containing protein YobA; FDG16_104650.0Showinfo_outline
52130713..2131588copper homeostasis membrane protein CopD; FDG16_104700.0Showinfo_outline
62131605..2131958PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; FDG16_10475; phage(gi971764937)9.60e-12Showinfo_outline
72132296..2132325attL0.0Showinfo_outline
8complement(2132332..2133186)PHAGE_Entero_HK022_NC_002166: integrase; FDG16_10480; phage(gi9634144)1.45e-78Showinfo_outline
9complement(2133246..2133740)PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; FDG16_10485; phage(gi985761253)8.72e-21Showinfo_outline
102133930..2134160PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; FDG16_10490; phage(gi169257182)5.24e-38Showinfo_outline
112134214..2134747PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; FDG16_10495; phage(gi16765210)1.40e-124Showinfo_outline
12complement(2135004..2135171)lytic enzyme; FDG16_105000.0Showinfo_outline
13complement(2135236..2135424)hypothetical protein; FDG16_105050.0Showinfo_outline
142135479..2135739PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; FDG16_10510; phage(gi169257184)1.02e-56Showinfo_outline
152135897..2136778PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; FDG16_10515; phage(gi169257205)1.04e-89Showinfo_outline
16complement(2136875..2137075)PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; FDG16_10520; phage(gi169257211)3.94e-42Showinfo_outline
172137645..2137770arsenic transporter; FDG16_105250.0Showinfo_outline
182138445..2138591PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; FDG16_10530; phage(gi100036)5.92e-17Showinfo_outline
19complement(2138918..2139532)disulfide bond formation protein B; FDG16_105350.0Showinfo_outline
20complement(2139542..2139700)hypothetical protein; FDG16_105400.0Showinfo_outline
21complement(2139833..2140747)EamA family transporter; FDG16_105450.0Showinfo_outline
222142024..2142053attR0.0Showinfo_outline
23complement(2142060..2142428)PHAGE_Entero_HK022_NC_002166: integrase; FDG16_10550; phage(gi9634144)6.28e-24Showinfo_outline

Region 6, total 54 CDS

#CDS PositionBLAST HitE-ValueSequence
12958048..2958062attL0.0Showinfo_outline
22958368..2958559PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; FDG16_14690; phage(gi428782688)5.87e-34Showinfo_outline
32958830..2959516virulence protein; FDG16_146950.0Showinfo_outline
42959501..2959800hypothetical protein; FDG16_147000.0Showinfo_outline
52959869..2960495PHAGE_Pseudo_F116_NC_006552: hypothetical protein; FDG16_14705; phage(gi56692976)3.72e-36Showinfo_outline
6complement(2960627..2961045)PHAGE_Stx2_c_1717_NC_011357: transposase; FDG16_14710; phage(gi209447153)1.08e-05Showinfo_outline
7complement(2961143..2962111)PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; FDG16_14715; phage(gi169257322)0.0Showinfo_outline
82962257..2962583PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; FDG16_14720; phage(gi100034)5.49e-23Showinfo_outline
9complement(2962587..2963168)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; FDG16_14725; phage(gi169257321)8.40e-143Showinfo_outline
10complement(2963168..2965606)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; FDG16_14730; phage(gi169257320)0.0Showinfo_outline
11complement(2965660..2965902)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FDG16_14735; phage(gi169257319)7.64e-54Showinfo_outline
12complement(2965941..2969291)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; FDG16_14740; phage(gi169257317)0.0Showinfo_outline
13complement(2969363..2970067)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; FDG16_14745; phage(gi169257316)9.79e-170Showinfo_outline
14complement(2969965..2970702)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; FDG16_14750; phage(gi169257315)0.0Showinfo_outline
15complement(2970712..2971407)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; FDG16_14755; phage(gi169257314)7.93e-174Showinfo_outline
162971497..2972030PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; FDG16_14760; phage(gi169257313)6.02e-125Showinfo_outline
17complement(2972147..2972644)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; FDG16_14765; phage(gi169257312)2.92e-113Showinfo_outline
18complement(2972744..2973076)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; FDG16_14770; phage(gi169257311)3.22e-77Showinfo_outline
19complement(2973073..2973522)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; FDG16_14775; phage(gi169257310)4.94e-95Showinfo_outline
20complement(2973515..2974225)PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; FDG16_14780; phage(gi169257235)2.07e-162Showinfo_outline
21complement(2974197..2974742)PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; FDG16_14785; phage(gi169257236)2.06e-89Showinfo_outline
22complement(2975211..2975657)PHAGE_Salmon_SEN34_NC_028699: outer membrane lytic protein Rz; FDG16_14790; phage(gi966201480)6.43e-92Showinfo_outline
23complement(2975675..2976127)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; FDG16_14795; phage(gi169257296)2.33e-106Showinfo_outline
24complement(2976111..2976439)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; FDG16_14800; phage(gi169257295)9.26e-25Showinfo_outline
252976715..2977401PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; FDG16_14805; phage(gi169257294)4.22e-170Showinfo_outline
262977762..2978211PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FDG16_14810; phage(gi169257293)2.59e-107Showinfo_outline
27complement(2978347..2978472)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FDG16_14815; phage(gi169257292)8.90e-23Showinfo_outline
28complement(2978667..2979356)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; FDG16_14820; phage(gi169257244)3.64e-126Showinfo_outline
29complement(2979353..2979493)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FDG16_14825; phage(gi169257289)2.98e-12Showinfo_outline
30complement(2979490..2980101)PHAGE_Phage_Gifsy_2_NC_010393: NinG; FDG16_14830; phage(gi169257288)4.16e-144Showinfo_outline
31complement(2980310..2980912)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FDG16_14835; phage(gi169257286)2.22e-145Showinfo_outline
32complement(2980997..2981218)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; FDG16_14840; phage(gi169257285)2.26e-30Showinfo_outline
33complement(2981328..2981561)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; FDG16_14845; phage(gi169257284)3.91e-30Showinfo_outline
342982153..2982749PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; FDG16_14850; phage(gi90592714)1.57e-05Showinfo_outline
352982761..2983738DUF4868 domain-containing protein; FDG16_148550.0Showinfo_outline
36complement(2983793..2984050)PHAGE_Salmon_118970_sal3_NC_031940: cytosine-specific methyltransferase; FDG16_14860; phage(gi100124)1.62e-08Showinfo_outline
37complement(2984050..2984694)PHAGE_Salmon_SPN3UB_NC_019545: putative Eaa protein; FDG16_14865; phage(gi423262432)2.62e-40Showinfo_outline
38complement(2984698..2985006)PHAGE_Caulob_karma_NC_019410: hypothetical protein; FDG16_14870; phage(gi414089390)1.27e-06Showinfo_outline
39complement(2985010..2985468)PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; FDG16_14875; phage(gi169257282)1.63e-44Showinfo_outline
40complement(2985465..2985812)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FDG16_14880; phage(gi169257281)2.62e-76Showinfo_outline
41complement(2985823..2986572)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; FDG16_14885; phage(gi169257280)0.0Showinfo_outline
42complement(2986575..2987558)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; FDG16_14890; phage(gi169257279)0.0Showinfo_outline
43complement(2987643..2987963)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; FDG16_14895; phage(gi169257278)1.49e-72Showinfo_outline
44complement(2987998..2988225)PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; FDG16_14900; phage(gi169257277)5.71e-17Showinfo_outline
452988331..2988765PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; FDG16_14905; phage(gi169257276)1.25e-42Showinfo_outline
462989062..2989193PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FDG16_14910; phage(gi169257274)1.01e-22Showinfo_outline
472989242..2989592PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FDG16_14915; phage(gi169257273)7.04e-45Showinfo_outline
482989719..2992918PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; FDG16_14920; phage(gi169257272)0.0Showinfo_outline
492992881..2994038PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; FDG16_14925; phage(gi169257271)0.0Showinfo_outline
502994081..2994320PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FDG16_14930; phage(gi169257270)1.38e-52Showinfo_outline
512994361..2994609PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; FDG16_14935; phage(gi169257269)1.63e-55Showinfo_outline
522994654..2995946PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; FDG16_14940; phage(gi169257268)0.0Showinfo_outline
532995981..2995995attR0.0Showinfo_outline
542996141..2997343PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; FDG16_14945; phage(gi100242)2.14e-49Showinfo_outline

Region 7, total 6 CDS

#CDS PositionBLAST HitE-ValueSequence
13066832..3068087PROPHAGE_Escher_CFT073: transposase insF; FDG16_15220; phage(gi26249410)1.83e-39Showinfo_outline
2complement(3068550..3069008)PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; FDG16_15225; phage(gi300116744)1.70e-18Showinfo_outline
3complement(3069200..3071476)PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; FDG16_15230; phage(gi100292)0.0Showinfo_outline
4complement(3071507..3071827)PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; FDG16_15235; phage(gi100319)4.84e-08Showinfo_outline
53072151..3072372PHAGE_Lactoc_bIL312_NC_002671: Csp; FDG16_15240; phage(gi13095918)1.92e-18Showinfo_outline
6complement(3072502..3074448)PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; FDG16_15245; phage(gi371496158)2.75e-46Showinfo_outline

Region 8, total 15 CDS

#CDS PositionBLAST HitE-ValueSequence
13689863..3689874attL0.0Showinfo_outline
2complement(3695352..3697703)PHAGE_Pseudo_vB_PaeS_PAO1_Ab18_NC_026594: putative integrase; FDG16_18240; phage(gi764160521)1.21e-44Showinfo_outline
3complement(3697716..3698318)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; FDG16_18245; phage(gi18249870)1.32e-27Showinfo_outline
4complement(3698311..3698532)hypothetical protein; FDG16_182500.0Showinfo_outline
5complement(3698529..3698792)nicotinic acetylcholine receptor subunit beta; FDG16_182550.0Showinfo_outline
6complement(3698789..3698983)hypothetical protein; FDG16_182600.0Showinfo_outline
7complement(3698976..3700004)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; FDG16_18265; phage(gi18249880)1.36e-17Showinfo_outline
8complement(3699998..3700180)DUF4222 domain-containing protein; FDG16_182700.0Showinfo_outline
9complement(3700173..3701006)PHAGE_Escher_TL_2011c_NC_019442: putative antirepressor; FDG16_18275; phage(gi418487055)5.87e-28Showinfo_outline
10complement(3701019..3701450)hypothetical protein; FDG16_182800.0Showinfo_outline
11complement(3701450..3701653)PHAGE_Entero_P4_NC_001609: transcriptional regulator; FDG16_18285; phage(gi9627517)5.82e-08Showinfo_outline
123702026..3702037attL0.0Showinfo_outline
13complement(3702082..3703296)PROPHAGE_Escher_CFT073: putative prophage integrase; FDG16_18290; phage(gi26250313)0.0Showinfo_outline
143707851..3707862attR0.0Showinfo_outline
153713389..3713400attR0.0Showinfo_outline

Region 9, total 68 CDS

#CDS PositionBLAST HitE-ValueSequence
14542379..4542393attL0.0Showinfo_outline
2complement(4543560..4544975)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; FDG16_22165; phage(gi100087)0.0Showinfo_outline
34545040..4546023NADPH:quinone reductase; FDG16_221700.0Showinfo_outline
4complement(4546198..4546440)envelope stress response protein PspG; FDG16_221750.0Showinfo_outline
5complement(4546608..4547645)tRNA dihydrouridine(20/20a) synthase DusA; FDG16_221800.0Showinfo_outline
64547734..4548831PHAGE_Entero_mEp460_NC_019716: integrase; FDG16_22185; phage(gi428782338)0.0Showinfo_outline
74548893..4549141PHAGE_Entero_mEp460_NC_019716: DinI-like protein; FDG16_22190; phage(gi428782337)7.10e-53Showinfo_outline
8complement(4549285..4549848)PHAGE_Entero_phi80_NC_021190: DNA invertase, resolvase, site-specific recombinase Pin; FDG16_22195; phage(gi824479608)7.83e-102Showinfo_outline
94549919..4550101PHAGE_Entero_IME08_NC_014260: gp37 long tail fiber distal subunit; FDG16_22200; phage(gi299779191)2.93e-11Showinfo_outline
104550174..4550902PHAGE_Kluyve_Kvp1_NC_011534: tail fiber protein; FDG16_22205; phage(gi212671420)5.54e-10Showinfo_outline
114550904..4551311PHAGE_Salmon_SJ46_NC_031129: replication and recombination DNA helicase; FDG16_22210; phage(gi100033)8.52e-97Showinfo_outline
12complement(4551315..4551932)PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; FDG16_22215; phage(gi100034)1.04e-143Showinfo_outline
13complement(4551902..4553434)PHAGE_Salmon_ST64B_NC_004313: tail protein; FDG16_22220; phage(gi23505468)0.0Showinfo_outline
14complement(4553438..4554022)PHAGE_Entero_SfV_NC_003444: tail protein; FDG16_22225; phage(gi19548988)7.86e-143Showinfo_outline
15complement(4554013..4555071)PHAGE_Entero_SfV_NC_003444: tail protein; FDG16_22230; phage(gi19549009)0.0Showinfo_outline
16complement(4555058..4555483)PHAGE_Entero_SfV_NC_003444: tail protein; FDG16_22235; phage(gi19549008)1.54e-98Showinfo_outline
17complement(4555483..4556031)PHAGE_Entero_SfV_NC_003444: tail protein; FDG16_22240; phage(gi19549007)1.35e-130Showinfo_outline
18complement(4556031..4557110)PHAGE_Entero_SfV_NC_003444: tail protein; FDG16_22245; phage(gi19549006)0.0Showinfo_outline
19complement(4557107..4558435)PHAGE_Entero_SfV_NC_003444: tail/DNA circulation protein; FDG16_22250; phage(gi19549005)0.0Showinfo_outline
20complement(4558526..4559038)hypothetical protein; FDG16_222550.0Showinfo_outline
21complement(4559120..4560952)PHAGE_Entero_SfV_NC_003444: tail protein; FDG16_22260; phage(gi19549004)0.0Showinfo_outline
22complement(4561094..4561363)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22265; phage(gi19549003)3.80e-59Showinfo_outline
23complement(4561363..4561719)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22270; phage(gi19549002)1.07e-84Showinfo_outline
24complement(4561719..4563215)PHAGE_Entero_SfV_NC_003444: tail sheath protein; FDG16_22275; phage(gi19549001)0.0Showinfo_outline
25complement(4563199..4563369)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22280; phage(gi19549000)1.39e-33Showinfo_outline
26complement(4563378..4563938)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22285; phage(gi19548999)5.47e-134Showinfo_outline
27complement(4563935..4564441)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22290; phage(gi19548998)1.25e-114Showinfo_outline
28complement(4564416..4564826)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22295; phage(gi19548997)1.98e-67Showinfo_outline
29complement(4564823..4565146)PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; FDG16_22300; phage(gi526244642)2.22e-70Showinfo_outline
30complement(4565121..4565348)PHAGE_Shigel_SfII_NC_021857: hypothetical protein; FDG16_22305; phage(gi526244694)3.45e-33Showinfo_outline
31complement(4565398..4566603)PHAGE_Entero_SfI_NC_027339: phage major capsid protein; FDG16_22310; phage(gi849250290)0.0Showinfo_outline
32complement(4566618..4567268)PHAGE_Shigel_SfII_NC_021857: prohead protease; FDG16_22315; phage(gi526244640)4.38e-155Showinfo_outline
33complement(4567246..4568487)PHAGE_Shigel_SfIV_NC_022749: portal protein; FDG16_22320; phage(gi557307529)0.0Showinfo_outline
34complement(4568487..4568669)PHAGE_Shigel_SfII_NC_021857: putative integral membrane protein; FDG16_22325; phage(gi526244693)1.59e-34Showinfo_outline
35complement(4568681..4570414)PHAGE_Entero_SfV_NC_003444: large terminase subunit; FDG16_22330; phage(gi19548992)0.0Showinfo_outline
36complement(4570428..4570913)PHAGE_Entero_SfV_NC_003444: small terminase subunit; FDG16_22335; phage(gi19548991)1.75e-113Showinfo_outline
37complement(4571039..4571389)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22340; phage(gi19549040)1.61e-76Showinfo_outline
38complement(4571440..4571772)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_22345; phage(gi100133)5.28e-76Showinfo_outline
39complement(4572235..4572627)PHAGE_Entero_SfV_NC_003444: putative Rz lytic protein; FDG16_22350; phage(gi19549038)2.65e-49Showinfo_outline
40complement(4572624..4573238)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_22355; phage(gi100131)1.54e-150Showinfo_outline
41complement(4573238..4573519)PHAGE_Entero_mEp390_NC_019721: putative holin; FDG16_22360; phage(gi428782713)2.26e-26Showinfo_outline
42complement(4573506..4573892)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_22365; phage(gi100130)6.27e-82Showinfo_outline
43complement(4574038..4574253)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_22370; phage(gi100129)4.31e-45Showinfo_outline
44complement(4574444..4575196)PHAGE_Entero_SfV_NC_003444: antitermination protein Q; FDG16_22375; phage(gi19549033)0.0Showinfo_outline
45complement(4575210..4576199)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22380; phage(gi19549032)0.0Showinfo_outline
46complement(4576207..4577016)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22385; phage(gi19549031)4.88e-169Showinfo_outline
47complement(4577036..4577425)PHAGE_Entero_SfV_NC_003444: crossover junction endodeoxyribonuclease; FDG16_22390; phage(gi19549030)1.62e-90Showinfo_outline
48complement(4577422..4577748)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22395; phage(gi19549029)2.12e-74Showinfo_outline
49complement(4577745..4578398)PHAGE_Entero_SfV_NC_003444: DNA adenine methylase; FDG16_22400; phage(gi19549028)1.52e-160Showinfo_outline
50complement(4578398..4578892)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22405; phage(gi19549027)2.52e-111Showinfo_outline
51complement(4578889..4579830)PHAGE_Shigel_SfII_NC_021857: O protein family protein; FDG16_22410; phage(gi526244675)0.0Showinfo_outline
52complement(4579820..4579999)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FDG16_22415; phage(gi100119)9.89e-14Showinfo_outline
53complement(4580175..4580732)PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22420; phage(gi19549023)3.72e-120Showinfo_outline
54complement(4580776..4580976)PHAGE_Entero_SfV_NC_003444: repressor; FDG16_22425; phage(gi19549022)1.06e-42Showinfo_outline
554581067..4581741PHAGE_Entero_SfV_NC_003444: repressor; FDG16_22430; phage(gi19549021)4.37e-168Showinfo_outline
564581913..4582116PHAGE_Salmon_118970_sal3_NC_031940: recombination endonuclease subunit; FDG16_22435; phage(gi100052)1.06e-19Showinfo_outline
574582125..4582400PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22440; phage(gi19549020)3.47e-61Showinfo_outline
584582676..4582986hypothetical protein; FDG16_224450.0Showinfo_outline
594582983..4583363PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22450; phage(gi19549019)1.50e-83Showinfo_outline
604583429..4584253PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22455; phage(gi19549018)0.0Showinfo_outline
614584381..4584917PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22460; phage(gi19549017)7.61e-131Showinfo_outline
624584908..4585270PHAGE_Entero_SfV_NC_003444: hypothetical protein; FDG16_22465; phage(gi19549016)6.19e-83Showinfo_outline
634585270..4586079PHAGE_Salmon_118970_sal3_NC_031940: baseplate wedge subunit; FDG16_22470; phage(gi100108)6.42e-80Showinfo_outline
644586079..4586651PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; FDG16_22475; phage(gi100107)1.30e-102Showinfo_outline
654586688..4586960PHAGE_Entero_mEp460_NC_019716: hypothetical protein; FDG16_22480; phage(gi428782341)1.05e-53Showinfo_outline
66complement(4586987..4587421)PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; FDG16_22485; phage(gi966197913)1.39e-46Showinfo_outline
67complement(4587438..4587977)PHAGE_Escher_HK639_NC_016158: hypothetical protein; FDG16_22490; phage(gi356870617)1.25e-09Showinfo_outline
684602913..4602927attR0.0Showinfo_outline

Region 10, total 26 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(4613871..4614218)PHAGE_Burkho_BcepMu_NC_005882: gp01; FDG16_22610; phage(gi48696911)2.55e-30Showinfo_outline
24614794..4615081PHAGE_Burkho_BcepMu_NC_005882: gp21; FDG16_22615; phage(gi48696931)3.91e-14Showinfo_outline
34615084..4615689PHAGE_Pseudo_B3_NC_006548: endolysin; FDG16_22620; phage(gi56692593)4.19e-73Showinfo_outline
44615702..4616016PHAGE_Burkho_BcepMu_NC_005882: gp25; FDG16_22625; phage(gi48696935)1.58e-29Showinfo_outline
54616176..4616631PHAGE_Burkho_BcepMu_NC_005882: gp37; FDG16_22630; phage(gi48696947)3.09e-15Showinfo_outline
64616628..4616825PHAGE_Burkho_BcepMu_NC_005882: gp38; FDG16_22635; phage(gi48696948)2.55e-11Showinfo_outline
74616815..4618242PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; FDG16_22640; phage(gi48696949)0.0Showinfo_outline
84618242..4618766PHAGE_Burkho_BcepMu_NC_005882: gp40; FDG16_22645; phage(gi48696950)6.46e-90Showinfo_outline
94618818..4619135PHAGE_Burkho_BcepMu_NC_005882: gp41; FDG16_22650; phage(gi48696951)1.91e-10Showinfo_outline
104619095..4619223GpE family phage tail protein; FDG16_226550.0Showinfo_outline
114619320..4621674PHAGE_Burkho_BcepMu_NC_005882: gp44; FDG16_22660; phage(gi48696954)1.56e-60Showinfo_outline
124621674..4622627PHAGE_Burkho_BcepMu_NC_005882: gp45; FDG16_22665; phage(gi48696955)5.01e-50Showinfo_outline
134622627..4622836PHAGE_Burkho_BcepMu_NC_005882: gp46; FDG16_22670; phage(gi48696956)6.98e-23Showinfo_outline
144622824..4623867PHAGE_Burkho_BcepMu_NC_005882: tail protein; FDG16_22675; phage(gi48696957)2.05e-101Showinfo_outline
154623877..4624599PHAGE_Burkho_BcepMu_NC_005882: gp48; FDG16_22680; phage(gi48696958)3.31e-38Showinfo_outline
164624927..4625289PHAGE_Entero_SfV_NC_003444: putative flippase; FDG16_22685; phage(gi19549013)2.68e-59Showinfo_outline
174625286..4626215PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; FDG16_22690; phage(gi19549012)0.0Showinfo_outline
184626215..4627762PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; FDG16_22695; phage(gi221328637)7.59e-62Showinfo_outline
194627926..4628285PHAGE_Burkho_BcepMu_NC_005882: gp49; FDG16_22700; phage(gi48696959)3.63e-43Showinfo_outline
204628276..4629391PHAGE_Burkho_BcepMu_NC_005882: gp50; FDG16_22705; phage(gi48696960)2.60e-132Showinfo_outline
214629384..4630016PHAGE_Burkho_BcepMu_NC_005882: gp51; FDG16_22710; phage(gi48696961)5.82e-32Showinfo_outline
224630019..4631764PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; FDG16_22715; phage(gi526003631)3.56e-85Showinfo_outline
234631769..4632374DUF4376 domain-containing protein; FDG16_227200.0Showinfo_outline
244632371..4632826PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; FDG16_22725; phage(gi418489075)2.37e-28Showinfo_outline
254633075..4633365hypothetical protein; FDG16_227300.0Showinfo_outline
264633562..4634290PHAGE_Salmon_SJ46_NC_031129: baseplate hub subunit; FDG16_22735; phage(gi100101)6.87e-39Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5006850 bps
Phages: 10
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

Download data as .txt file: png_input file_download