Submission Results
Sequence Name: Not Available
GenBank Accession Number: X92945.2
GenInfo (GI) Number: 0000000000
Download Results: X92945.2.PHASTER.zip
gi|00000000|ref|X92945.2| Enterococcus faecalis plasmid pRE25 DNA. 50237, gc%: 34.05%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 1 regions are intact, 0 regions are incomplete, and 0 regions are questionable.
Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
---|---|---|---|---|---|---|---|---|
1 | 17.7Kb | intact | 100 | 20 | 32115-49907 info_outline | PHAGE_Bacter_Sitara_NC_028854(2) | 35.13% | Show info_outline |
Region DNA
>1 32115-49907 CACTATTTACAACAAAAGACAAGTCGAGGAATTCCAGTTAAATTTCGTGTAGGTATTTTT AGAGTAGAAGATCAAACAAAAATTATGTCTGTTACGCTGAATACAAAAAATACCAAAGAA ACGGACGGTAATTAACTTGTTATTAAATCGAGTAACAGATCAACACGTTTTAGTTTACTT GAATGAACCAACAGAACCAACGCTTAATACGCAAGAATTAAACCGTCAGGAGTTAAAAAC GAGTAATGAACGCCAAGAAATACCGCAGACAGAAATTCCAACTGAAACAGTAAATGAACC TAGTGTTATTAAGGAAATATCGAAAAAGAACCAAGCAAAACAAACGAATAGCAGAAAAGA ATCACTATCAGAATCCATAACCAAGAAAAATGTTCCCAAAATTCATTTGTTCATATCTAT TTTGACCCTTTTTATTGTATTATTGATAGGAATAAGTGTTATTCAACAAGTACAACTTCA ATCAGTCAAAAAAGAGAGCGAATTATTGAAAGAACAAATTGAGCGTGTCAAAGAAACGGA TATTTCTCAATCGAAAATAGATACTTTTGGTAGATACTTTTTAACTTATTATTTTTCACA AGAAAAAAATAAAGAAAATTATCAATCTAGTTTAAGAAGTTATGTATCAGAAAAAGTAGA TATAGCTGATTGGGAAGCGTTAGGGAAAACTCTTAAAAGTGTTAATTATTACGGTAGCGA ACAAACAAAAAAAGGGTATAGTGTTGAATACCTTTTAAATGTTACGGTAGAGGATCGTAG TAAAATGCAAAAAATCACTTTTGAGGTTGAACCAACTAAAAACGGCTTTCTTGTGACAAC TCAACCAAAACTTACAGACTTCTCTTTTAACTGAAATACGCTAAAAAGAGAGTGCTTAAA CAATGGGAAAAATTAATTTAAATCAAATTTACACAGCAAAAGAAATGAGTGAAAGGATAG GTAAGAATAGAAATTACCTATCCCAAGCTTACCGTAATAACAAACATGAAATACTTAAAA ATTTTAATTATCGAAAAATTGGTGGAACAATTATTTTCTCTGATAATCCCAATAATGATT TATCGCAATTGATTACAGCAAAAGAAGCAAGCCAGTTGTTAGGAAAGAATGATGAATACT TTGCCCACATTTATAAACGGTTTCCTCATAGACTAGAGGGAATCGATCACATTTATACAG GTAAAACATTATTCTTAACGAAAGAATCGCTAGAAGTTTTTAAAAAAAAGATGAATAAAA ATGTCAGATAAAGCATATTTATGATATACTATTTATGTACACAAATACTAATTTTTAAGG AGATTATAAAATGAAAAAACTTGCCCTCTTAACACTATTCAGCACTACTTTATTAGTATC AGCACCGATTGTCAGTTTTGCAGACGAAACCGCAAGTAGCAGTGATATTAATATCTTAGC CGATGATGATCCAGTCGTTCCAGTAGAACCGACAGACCCGACTACTCCAGTTGATCCAGT TGATCCAGTTGATCCAGTTGATCCAGTTGATCCGGTTGATCCAGTTGATCCAGTTGATCC AACAGAGCCAACAGAGCCAACAGAGCCAACAGAGCCAACAGAGCCAACAGAGCCAACGGA GCCAACAGAGCCAACAGAGCCAACAGAGCCAACAGAGCCAACAGAGCCAACGGAACCAAC AGAACCAACGGAGCCAACGGAACCAACGGAACCAAGCAAGCCAACAGAGCCAACGGAACC AAGTAAGCCAACGGAACCAACAGAGCCAACGGAACCAAGCAAGCCGACAGAACCAAGTAA ACCAACAGAGCCAACAGTACCAAACAAACCAGTAGACACAAACCCAATTGAAAACCCAGT TAATACAGATACAGGCGTTGTGATTGTTGCGGTTGAAGATAGTAAACCAATCATTCAATT AGCAGACGGAACAACAAAAAAAGTTGAAGCTAAAGAAATTGGAGCAGACGTTCAAAAAGA CGGAACAGTAACGGTTAAAGGTTCAGACGGAAAAATGAAGGTTTTACCAAAAACAGGTGA AACAGCAAATATTGCACTGTCTGTCCTAGGTTCATTAATGGTATTAGGATCAGGAATCAT TTTTAAAAAGAGAATTTAAGTAAATTTAAAAGCATGGTCGCAAGTTTCACTAGCAGCCAT GCTTTTTTTGAATCTTTGTAGGACGTTTTAAAGAGAATTACCCACTTTAAAATTAAACAT GCGCTTAGAATCGCTTTAGGAAACACGATCCAGTCCAATAATCGTCGATAAAAACTTTTG AAAAAGGTTGGTGAAATTACCTACTTTTGGAATAATCACAAATCACAAGTGATTAATCAC AAATCACAAGTGATTAATCACTTGTTTATTAAGATATTAAAAGCTATAATTTAAATAAAG CGTGAATTTTATTACACAAAAAGAGGGGGAGAAACTTGGAACTAGCATTTAGAGAAAGCT TAAAAAAGATGAGAGGTACCAAATCAAAAGAAAAATTCTCCCAAGAATTAGAAATGAGTA GATCAAATTATTCACGAATAGAATCAGGAAAATCAGATCCAACCATAAAAACACTAGAAC AAATTGCAAAGTTAACTAACTCAACGCTAGTAGTGGATTTAATCCCAAATGAGCCAACAG AACCAGAATCAGAACAAGTAACATTGGATTTAGAAATGGAAGAAGAAAAAAGCAATGATT TCGTGTAAAAAATGCACGAAATCATTGCTTATTTTTTTAAAAAGCGATATACTAGATATA ACGAAACAACGAACTGAATAAAGAATACAAAAAAAGAGCCACGACCAACTTATTTTCCGC CAAGAAAATAAGTTGCGAGCCTTAATTGATTACCACCAATCAATTAAAGAAGTCGAGACC CAAAATTTGGTAAAGTATTTAATTACTTTATTAATCAGATACTTAAATATCTGTAAACCC ATTATATCGGGTTTGGTTCTGTTGCAAAGTTTTAAATCTACTATCAAATAAGGTAGAATA ATAGAAAAAGATAGCAGGAGGAATGACGATGAATCATTTTAAAGGAAAGCAATTTCAGCA GGATGTGATTATTGTAGCCGTGGGCTACTATCTTCGTTATAACCTTAGCTATCGTGAAGT TCAAGAAATCTTATATGATCGTGGCATTAACGTTTCTCATACGACGATTTATCGTTGGGT GCAAGAATATGGCAAACTACTCTATCAAATTTGGAAAAAGAAAAATAAAAAATCCTTTTA TTCATGGAAAATGGATGAAACGTACATCAAAATTAAAGGAAAATGGCATTATTTGTATCG AGCCATCGATGCAGATGGTTTAACCTTGGATATTTGGTTACGTAAAAAACGGGACACACA AGCAGCCTATGCTTTTCTTAAGCGGTTAGTGAAGCAGTTTGATGAACCGAAGGTTGTAGT CACAGATAAAGCCCCCTCTATTACAAGTGCCTTTAAGAAACTAAAAGAATACGGCTTTTA TCAAGGGACAGAACATCGTACCATTAAATACCTGAATAATTTGATTGAACAAGACCATCG TCCAGTAAAGAGACGCAATAAATTCTATCGAAGTTTACGCACTGCCTCTACCACGATTAA AGGCATGGAAGCCATTCGAGGATTATATAAGAAAACCCGAAAAGAAGGCACTCTCTTCGG GTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATAC CGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCAAAATATCCACAAGCAA AAAATGTGGATAAGACAACAGGATTCGTATGCCCTTTTTTGTATAAAGCAGGCAAAACAG AGCATTAAATGCAGGAAAATCGCAGAAGATCATACCTAAAAATGAAAATGTGATAAATTT TTTAGAGTAAATTTTTTTAATCTAATCTAGAAAATCAGTACATCGCAAAAAGCTCTTGTT AAAGATTTATTCAAGGGATATGTGTGGAATAGGATACCCAGAAAGGATCGACTTCTGCTT GGAACGTTATTTTTTAAACCATGTTAGCAAAATGAATGGTAATTTAAAGGCTATTGAAAA GACTTCATCTAATCAGCAGAGGTATAAAAAGACAATTGATAAGTTTTAACTATCTTTTGT GAAATTAAAAAAATTATAAATATGTTGAGTAGAAGCAAAAGATTTGGCTTGGAATTTTTA CAGCAGTGAATCGATAAAAGGAGCATGCTTGATGGTAGATAATATTATTAAATCAGTAGC AGAGAAATTATCCTCTCTGTCTTATATAGAAGGTATTGTTTTAGGTGGTTCACGTGCAAG GGGCACCCATACAGAGGATTCGGATATAGATATCGGCATCTATTACAATTCAGAATCATT TGACATAAATACTATTAATCAATTCGCTACAAAGCTGGATGATGAGCATAGAAATAACCT TGTTGTACCTCCCGGAGCATGGGGTGATTGGATTAATGGCGGCGGATGGTTAGTCATAAA CGGGTATCATGTGGATTTAATTTTACGTGATATTAAACGTGTGGAACAAATAATGAAAGA TACAGAGCACGGAATTGTTACTGCCAATTATCAGACTGGGCATCCCCATGGTTATATTAG TGCAATGTATCGAGGAGAATTAGCGATTAGCAAAATACTATATGCTAAGAATGAAAGCTT ATGCGAATTAAAAAAACAGGCAGAAACTTATCCCAATGCTTTGCAGAAAAGTTTAGTTAA CTTTTTTATGTTTGAAGCAGGGTTCTCTTTAATGTTTGTAAAAGCAAATTCGGGAACAGA CGATAAATATTATATTGCGGGTCATGTTTTTCGTATAGTTTCATGTTTAAATCAAGTGTT ATTTGCATGTAATAATGCTTATTGTATCAACGAAAAGAAAGCTATAAAACTGCTTGAAAC TTTTGAACATAAACCTGAAAAATATACCGAGAAGGTAAATCATATTTTTGAAGTACTCGG TATCTCACTTTTTGAATGCTACGACATGACCGAGAAGCTTTATAATGAAGTGAATGAAAT TGTATCGGAGATAAATAACTTTTTAAACGAGGAGAGTTCAGATGAAAGAAAACAAATATG ATGATAATATATTTTTTCAAAAATACAGTCAAATGAGTCGCTCGCAGAAAGGACTGGCTT GGTGCGGGAGAATGGGAGACTTTGAAAAAGATGCTACCTGATTTTAAGGGTAAGCGTGTG CTTGATTTAGGATGCGGCTATGGATGGCACTGTATATATGCGATGGAAAACGGTGCTTCC TCTGTAGTAGGTGTTGATATTTCTCATAAAATGCTCGAAGTAGCAAAAGGAAAAACCCAT TTTCCACAGATTGAATATGAATGCTGTGCCATAGAAGATGTGGATTTCCCAGAGGAGAGC TTTGATGTAATACTAAGTTCGCTTGCGTTTCATTATGTAGCAGACTATGAGAATTTAATA AAAAAGATATATAGGATGCTGAAGGCTGGTGGCAATTTAGTTTTTACAGTTGAACATCCT GTTTTTACTGCTCATGGAACACAAGACTGGTATTATAACCGAAAAAGGAGAAATACTGCA TTTCCCGGTGGACAATTATTATTATGAGGGCAAACGGACAGCTATGTTTTTGGAAGAAAA GGTTACAAAATATCATAGAACACTGACCACATATCTAAATACACTGCTTTCAAATAGTTT TATAATAAATCAGATTGTGGAGCCACAGCCGCCAGAGAACATGATGGATATTCCGGGGAT GGCGGATGAAATGCGACGCCCAATGATGCTGATTGTATCGGCAAAAAAGAAGATGTAATA ATATAGAAAAAATAAACGAGGAGTATGTAAATGAGATCAGAAAAAGAAATGATGGATTTA GTACTTTCTTTAGCAGAACAGGATGAACGTATTCGAATTGTGACCCTTGAGGGGTCACGC GCAAATATTAATATACCTAAAGATGAATTTCAGGATTATGATATTACATATTTTGTAAGT GATATAGAACCGTTTATATCTAATGATGACTGGCTTAATCAATTTGGGAATATAATAATG ATGCAAAAGCCGGAGGATATGGAATTATTCCCACCTGAAGAAAAGGGATTTTCCTATCTT ATGCTATTTGATGATTACAATAAAATTGATCTTACCTTATTGCCCTTGGAAGAGTTAGAT AATTACCTAAAGGGCGATAAATTAATAAAGGTTCTAATTGATAAAGATTGTAGAATTAAA AGGGACATAGTTCCGACTGATATAGATTATCATGTAAGAAAGCCAAGCGCAAGGGAGTAT GATGATTGCTGCAATGAATTTTGGAATGTAACACCTTATGTTATTAAAGGATTGTGCCGT AAGGAAATTTTATTTGCTATTGATCATTTTAATCAGATTGTTCGCCATGAGCTGCTGAGA ATGATATCATGGAAGGTCGGCATCGAAACAGGCTTTAAATTAAGTGTAGGCAAGAACTAT AAGTTTATTGAAAGGTATATATCCGAGGATTTGTGGGAGAAACTTTTGTCCACCTACCGG ATGGATTCCTATGAAAACATATGGGAAGCATTATTTCTATGCCATCAATTGTTCAGGGCG GTATCCGGTGAGGTGGCGGAAAGGCTTCATTATGCCTATCCGGAGTATGATAGGAATATA ACAAAATATACCAGGGACATGTATAAAAAATACACTGGTAAAACCGGCTGCCTGGATAGC ACATATGCCGCTGATATAGAAGAGAGGCGGGAACAGTGATTACAGAAATGAAAGCAGGGC ACCTGAAAGATATCGATAAACCCAGCGAACCATTTGAGGTGATAGGTAAGATTATACCGA GGTATGAAAACGAGAATTGGACCTTTACAGAATTACTCTATGAAGCGCCATATTTAAAAA GCTACCAAGACGAAGAGGATGAAGAGGATGAGGAGGCAGATTGCCTTGAATATATTGACA ATACTGATAAGATAATATATCTTTACTACCAAGACGATAAATGCGTCGGAAAAGTTAAAC TGCGAAAAAATTGGAACCGGTACGCTTATATAGAAGATATCGCCGTATGTAAGGATTTCA GGGGGCAAGGCATAGGCAGCGCGCTTATCAATATATCTATAGAATGGGCAAAGCATAAAA ACTTGCATGGACTAATGCTTGAAACCCAGGACAATAACCTTATAGCTTGTAAATTCTATC ATAATTGTGGTTTCAAAATCGGCTCCGTCGATACTATGTTATACGCCAACTTTGAAAACA ACTTTGAAAAAGCTGTTTTCTGGTATTTAAGGTTTTAGAATGCAAGGAACAGTGAATTGG AGTTCGTCTTGTTATAATTAGCTTCTTGGGGTATCTTTAAATACTGTAGAAAAGAGGAAG GAAATAATAAATGGCTAAAATGAGAATATCACCGGAATTGAAAAAACTGATCGAAAAATA CCGCTGCGTAAAAGATACGGAAGGAATGTCTCCTGCTAAGGTATATAAGCTGGTGGGAGA AAATGAAAACCTATATTTAAAAATGACGGACAGCCGGTATAAAGGGACCACCTATGATGT GGAACGGGAAAAGGACATGATGCTATGGCTGGAAGGAAAGCTGCCTGTTCCAAAGGTCCT GCACTTTGAACGGCATGATGGCTGGAGCAATCTGCTCATGAGTGAGGCCGATGGCGTCCT TTGCTCGGAAGAGTATGAAGATGAACAAAGCCCTGAAAAGATTATCGAGCTGTATGCGGA GTGCATCAGGCTCTTTCACTCCATCGACATATCGGATTGTCCCTATACGAATAGCTTAGA CAGCCGCTTAGCCGAATTGGATTACTTACTGAATAACGATCTGGCCGATGTGGATTGCGA AAACTGGGAAGAAGACACTCCATTTAAAGATCCGCGCGAGCTGTATGATTTTTTAAAGAC GGAAAAGCCCGAAGAGGAACTTGTCTTTTCCCACGGCGACCTGGGAGACAGCAACATCTT TGTGAAAGATGGCAAAGTAAGTGGCTTTATTGATCTTGGGAGAAGCGGCAGGGCGGACAA GTGGTATGACATTGCCTTCTGCGTCCGGTCGATCAGGGAGGATATCGGGGAAGAACAGTA TGTCGAGCTATTTTTTGACTTACTGGGGATCAAGCCTGATTGGGAGAAAATAAAATATTA TATTTTACTGGATGAATTGTTTTAGTACCTAGATTTAGATGTCTAAAAAGCTTTAACTAC AAGCTTTTTAGACATCTAATCTTTTCTGAAGTACATCCGCAACTGTCCATACTCTGATGT TTTATATCTTTTCTAAAAGTTCGCTAGATAGAGTTCTATATTAGAGATGTAAAGAGTTTT GGTGAAGAGGTTTGTGAGTATGGCTTTTATAACCAGGGTGCAATGAGAAGCACTAACAGC AGCTAGCTTAAGAACGCATAGGATATACTTTTTATGGAAGTCACAGAGGAGGAATAAAAT TTGAACAGGATTAACAGAGTAACCTCTATTCTTATTCAGCTGCAATCAAAAAAAATAATT CCTGCCAAAGAAATTGCACAGCGATTTAATATAAGCTTAAGGACAGTTTACAGAGATATC CGGACACTTGAAGAAGCCGGAATACCAATTGGATCTGAGGCCGGAAAAGGATATTTTCTT GTAGAGGGCTTCCTACTTCCGCCGGTAATGTTTACAGCGGCGGAAGTGGGTGCATTGATT ACAGCAGGGAAATTTTTAAATTGCCATGGAGATGAATCATTTATAAAGGATTTTGATTCA GCTATGTATAAAATCAAATCTATTTTGAAGCATGGTGAAAAAAACTATGCACAGGAGTTG GAGAACAGTATTAACGTGTACAGCACATCTGGACAGAAAAATACATTGGCGGATAACGTT ATTGCAGCAATTCAGACTGCAATCTGCAATAAAAGGGTAATATCAATTCAATATCCTGCA TCAGGAGGGCAAGAACCGGAAAGCAGAATGATAGAGCCTATATCACTGGGGTTTTATGAA CAGAACTGGTACTTAATCGGTTTTGCAGGCTAAGAAATGAATATAGGAATTTTCGTGTGG ATCGGATTAAAAGCATTTGCATAGAAGAAGAGCTCTGTCAAAGCCATGATGGCTCTTTGG AACAAATATTAAAACAAATGCTTTCATATAAAAAACTATATGCCCTACAATGCCGTTGTA AAAATTGGGGAAAAGGGATATATTGATTTTATATCTTTCTCAAAATAAATATAAAAGCCC TTTAAAGAGGGCTTTTATATATTAATCACAAATCACTTATCACAAATCACAAGTGATTAA TCACAAATCACTTGTGATTTGTGATTCTTAATGATACAATATTACTATACAAAAAAAGAA TGGGGCGTAGTTATGGAGAAGGAAAAACTAAAAATACTTGAAGAATTAAGACGTATTTTA AACAATAAAAATGAAGCAATTATTATCTTGAATAATTACTTTAAAGGTGGTGTTGGAAAG TCCAAATTATCGACTATGTTTGCTTACTTGACAGACAAATTGAATTTAAAAGTTTTAATG ATCGATAAGGACTTACAGGCAACATTGACAAAAGACTTAGCAAAAACTTTTGAGGTAGAA TTGCCACGTGTCAATTTTTATGAAGGCTTGAAAAATGGAAACTTGGCTTCTTCTATTATT CATTTGACTGATAATTTAGACTTGATCCCTGGCACGTTTGATTTGATGTTACTGCCAAAA TTAACTCGCTCATGGACGTTTGAAAATGAAAGTAGATTGCTTGCTACTCTTTTAGCACCT TTAAAAAGTGACTATGATCTTATTATTATTGATACTGTACCAACGCCAAGCGTTTATACA AATAATGCAATCGTGGCGAGTGATTACGTTATGATCCCTTTACAAGCAGAAGAAGAAAGT ACAAACAACATTCAAAACTATATTTCCTATTTGATTGATTTGCAAGAACAGTTTAACCCT GGACTAGATATGATTGGTTTTGTTCCTTATTTAGTTGATACGGACAGCGCAACGATAAAA TCAAACCTGGAAGAACTGTACAAAGAACATAAAGAGGATAATTTGGTTTTCCGAAATATT ATCAAGCGAAGTAATAAAGTAAGTACTTGGTCTAAAAATGGCATTACAGAACACAAAGGC TATGACAAAAAAGTTTTGTCTATGTATGAGAACGTATTTTTTGAAATGATTGAGCGAATC ATTCAATTAGAAAATGAAAAAGAATAGAATCACAAATCACAAGTGATTAATCACAAATCA CTTGTGATTTGTGATAGGTGATGATAAAATAAATAGTAAGAAGAAATAGAAAGAAGTGAG CGATCGTGGGAAATTTAGGCGCACAGAAAGCAAAACGAAATGATACGCCAATCAGCGCAA AAAAAGATATAATGGGGGATAAGACGGTTCGTGTTCGTGCCGACTTGCACCATATCATAA AAATCGAAACAGCAAAGAATGGCGGAAACGTAAAAGAAGTTATGGATCAAGCCTTAGAAG AATATATACGGAAATATTTACCTGACAAACTTTAAAAGGAGTGAAAATGAAATGGCAGTT ACGTATGAAAAAACATTTGAAATTGAAATCATTAATGAGTTATCGGCAAGTGTTTATAAT CGGGTATTAAATTATGTTTTGAATCATGAACTAGATACTAAAAATACTCGTTTACTAGAA GTGAATCTTTTAAATCAATTAGAAGTGGCACAAGAAGTTGATTTATTTCAACAACCATTT GAAGAATTACAAGCTATTCATGAGTATTGGCGGTCAATGAATCAATATTCAAAACAAATT TTGAATAAAGAGAAAGTGGCTTAACATGGCGAATATTACTGACTTCACCGAAAAGCAATT TGAAGATCGTTTAGAAAAGAATGTTGAACGACTAACTAAAAATAGACTAGCGGTTGAATC GCCAACCGCTTTTTTACTTGGTGGGCAACCAGGGTCAGGGAAAACCAGTTTGCGATCAGC AATTTTTGAAGAAACACAAGGGAATGTTATTGTCATTGATAATGATACCTTTAAACGGTT CTGTTGCAAAGTTTTAAATCTACTATCAAATAAGGTAGAATAATAGAAAAAGATAGCAGG AGGAATGACGATGAATCATTTTAAAGGAAAGCAATTTCAGCAGGATGTGATTATTGTAGC CGTGGGCTACTATCTTCGTTATAACCTTAGCTATCGTGAAGTTCAAGAAATCTTATATGA TCGTGGCATTAACGTTTCTCATACGACGATTTATCGTTGGGTGCAAGAATATGGCAAACT ACTCTATCAAATTTGGAAAAAGAAAAATAAAAAATCCTTTTATTCATGGAAAATGGATGA AACGTACATCAAAATTAAAGGAAAATGGCATTATTTGTATCGAGCCATCGATGCAGATGG TTTAACCTTGGATATTTGGTTACGTAAAAAACGGGACACACAAGCAGCCTATGCTTTTCT TAAGCGGTTAGTGAAGCAGTTTGATGAACCGAAGGTTGTAGTCACAGATAAAGCCCCCTC TATTACAAGTGCCTTTAAGAAACTAAAAGAATACGGCTTTTATCAAGGGACAGAACATCG TACCATTAAATACCTGAATAATTTGATTGAACAAGACCATCGTCCAGTAAAGAGACGCAA TAAATTCTATCGAAGTTTACGCACTGCCTCTACCACGATTAAAGGCATGGAAGCCATTCG AGGATTATATAAGAAAACCCGAAAAGAAGGCACTCTCTTCGGGTTTTCGGTCTGTACTGA AATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCT TTATTTAAAACTTTGCAACAGAACCAACTAGACTGTGCAAAATAGAGACACTTGAAAAAT CTATCGGGGGTCAGAAACTTAATAGTTTTTGACACATAAACAAAATCGCGATATAATGGG GTTGAGAGTGTTTCATAAACTTATGTCATAAAGTTAAGGAGATTTCGCATGATTTTAGAG AATAAATTGGGATTAACCAATCAAGTTGAGTTGGCTAAGGTTGAAGAAAAACTCAGTAAA CAAAAAGCGAAAGAATTGTACGATTGTGGAAAAATAAATGAAATCGAAGTTGGTACATTT AAAGGTTTATCTGAAATTCATGAATTTCTATTTTCGGATATTTACGATTTTGCCGGAAAA ATCCGATCGGTCAATATTGCAAAAGGAAATTTTCGATTTGCACCAGTTATGTATTTAGAA CATTCGTTACAGCATATTGATCAGATGCCACAAACTTCTTTTGAAGAGATTATCAAGAAA TATGTGGAGATGAATATCGCTCACCCATTTCGAGAAGGAAATGGCCGAAGTACTAGAATT TGGCTGGATCTCATTTTAAAGGAAGAATTGCAAAAAGTTGTAGATTGGAACTTAATCGAT AAAGCAGACTATCTTTCTGCAATGGAGCGAAGTCCCATAAACGATTTGGAAATACGCTAT CTAATTTCCAATGCTCTGACTGATAAAATTGACGATCGCGAGTTATATATGAAAGGAATC GATGTCAGCTATTTCTATGAAGGGTATTCTGAGTATACGATAGATGATTTGTAAAAGTAG GTGGACCAAATGACGAAATATGGATATGCACGTGTCTCAACCGCTTCTCAAAGTACAAAA GAACAAATTCAACAGTTGCTTGAGAACGGCGTAGAGAAGAAGAATATTTTTTCAGAAAAA TTTACGGGTACAAAACGGGATCGGCCAAAATTCAATCAGCTGTTGGCTGGTCTGAAGCCT GGAGATGAAATAGTTGTTACGAAGCTTGATCGATTTGCTCGTAACACGAGAGAAGCATTA GAGATCATTGAACCTTTACTCGATGATAACGTAACGATCAAGGTTTTGAATCTAGGAACG ATTGAAAATACGTCCATGGGGCGAATGGTGACACGGACGTTGTTGAGTGTAGCAGAAATG GAACGTGATATGATTGTGGAACGTACCCAAGAAGGAAAAATGTTTGCAAGAAAGAATAAT CCTAATTTCAGAGAAGGACGTCCGAAAGCAACAATCACACCGAAGAAGAGGCACGCATAT GAACTGCTTACTTCAGGTAAATCGTATAAGGAAGTTGAAGCTATAACCGGTTTCAGTCGC AGTACGCTTTTTAGAATAAAGAAGAAAATTGAAGAAAGTTAAAAAAGAAGTCTCAGCGAA CCAGACAGGTAAATACTTAATGCGTTCTAGATATGAGTCTATTAGCATGTTGTGAAATAT AATATTTTTTTATTTACTTGATTTCTGCTCAAAAAATGTGTATGGTAACTGTAAAAGGTA AAGTAATTAAAGGTATGCTAGCCACGCTTACTATATTAGGATACCATCATATATTTATAA TGAACGATTTGTTCGTCTACCAAACAACACATATCGTTCAGCGTAAGTCACGTTTAGGAA CGTGGCTTTTTTAGTGTTATTATCGATAAATAATCTATTGACTCTATTGATTTTATCTCC ATATCCCTACGGTGTTGATTGTCTTTAGATCTTTCATTTAAGAACCAAATAACTATCATA AAAATCAGCACTGCTGCTAATATAATAAACAGCATTCCTATTGTGATATTACTGGATTTG AGTCAATATCTTGGACACATTTTAGTAGAGACGGTTAAGCCATTTTTTCTTTTGCTAATT CTTCAAATTCCTGTGGGGTTAGATAGTGAATCGAGCTATGGATTCGATTTCGGTTATAAA ATCCTTCAATGTAGCTAAATAGCGCTCGATTTGCTTCTTCAAAATCTGAGTAGCTAGTCG TGTAGACTTCTTCTTTTTTCAATGAGGCATGGAAAGATTCGATTCCAGCATTATCATAAG GTGTTCCTTTTCTACTATAAGAATGCCTTATTTTGTTGGTTTTAAGCCATTGTTCCACTT CTCTTGCTGTGTATTGGCTGCCCAAGTCAGTGTGTAGAATCATTCCTTCTGGAATGTGAT AATGTATTTTTGCTTTATTCAATGTTTGAATGACACAATCCACAGTCATTCGTTTTGAAA ATGTATAACTAATAATTCTTTTCGTGTGTAAATCCATGATTGAAGATAAGTAACACCAAC CATTTTTCTTAGTAGGAATGTACGTAATGTCAGCTGCCCATTTCTCACAGATCGTTTCAG TAGAAAAGTCCTGATTTAAGAGATTCTCTTTTGAAATGATGGAATGGCAACAGTTTTTTT GACAAATTTTATAAGGTGCAGAACTTCTTTCCGTATGCTATTCCGATTGTCCTTGACAAT GAGCCTCCTCGGATGTGACGATCTTCGGCAGGAGCTAACAGTTAAAGTTAGACTGCCTCG CTAGCGTTAGCACATCCGAGCTCATTATCAAGGATTCGCTGCGCCAATCTCTGGTTACGG TAACCAACCGGTGTCTCGTAGCCAAGTGTACCGTGCAACCGAAGGTGGTTCCACCAATTG ACATAGTCAAATAACTCCAAATCCAATTGTTGTAAGGTTTCAAATGTGTATTGATAGACA AATTCTACTTTCAACGACTTATAAGTTGATTCAGCTACGGCATTATCAAAAGGACAGCCT TTATGACTCAATGATCGATTGATGTCAAAAGTTGTTAATAATTCATCAATAGCTTGGTTA TCAAACTCTTTTCCACGATCAGTATGAAAAATCTCAACCTCTGTCAGAGGTTGTTTGATA CGGCTAAATGCTTTTTTTACTAGAACGGCATCTTTATGTTCTCCACAAGAATAGCCGAGA ATTTCTCGATTGAACAGATCCAAAATGAAACAGACATAATTCCATTTTTTCCCGACTCGT ACATAAGTCAAGTCTGTTACGATCGCTTCTAATGGGTTGTCTCTTAAGAATTTACGATTC AATACGTTTGTCGTTTTGGCTTCATTGCAAGTAGAATGATGTACTTTAAAATAAGCAACA GTATAGCTCGATTTTAATCCTCTATTTTTCATGATTCTACTAATTTTTCGTCGGCTGATC TGAATGCCTCGTTTTGATAAGGCTTTTTTTATTTTTCTTGAGCCGTAGGCCTTTCGGCTG CGGATAAATTCTTCAGCGACTACTTCTTCAAGTTCTGATTCGTCTTTCTTTGGTTTTGAT TGATAATAATAGGACTGACGTGATAGACCTAATATTCTGCACATCGCTGATATAGGGTAA AGATGCTTATTCGCATCGATTACTTGTCTCTTCGTCCGAATATCAGCGCTGCTTGCTTTA AAATATCATTTTCCATTTCTAATTGCTGGTTTCTTTTACGTAGTTCTAACAATTCTTTTT GTTCAGGCGTAAGATTATCTTTTTCTTTGAATGAACCACTCGTTTTAAATTGCTTTACCC ATTTGTCAAATGCTGAAGCCGTTAGTTCATATTCTCGAATGATTTCTACACGTGGCTTTC CAGCTAAGTAAAGATTGACGATTTGTTGCTTGAATTCTTGTGAAAAAGTTCTTCGTGTTC TCTTAGACATAAAAATTCCTCCTGGTATGTTTTCTTCTAGTCTACACACCTTAATTTTTC TGTCTAGTTAATTGTAGCCTATCCATGATCGGTTTATTAGACCTTTGAGGTCTATATTTT TTAACTACAATCGACCTTAAATTTAATTGTTTCATTAGCTTTTGGACATGTTTAAGAGAT ACTGAAATCCCTTCTTTTAATAAAACTTGATGGATCTTTGTGGCACCATAGCGTTGTTTA TTCGTAAAAAAAATTGTTGAAATCTTCTTTTTCAACTTATTATTTCTGATTTCTGTAGCT GTCAACGGTTTATTCTTATAAAAATAATAGACACTTCTAGGGATTTCTAATAACCGACAC AACAAAGAAACAGTGTAATCCTTACACCATTTTTCAATAAATTGAACAAGCGAATTTAGG TTTTCCGAGAGAATATGGCTGCGGCTTTTTTTAAGATTTCAAGTTCCTCATTTAAACGAG CATTTTCTTTTCTCAGTTCAGCTACTTCTTTTCCAGTCAGTCCTGTGGACTGATCAGGTA AATATAAATTCTTCCATTTGTAAATCGTTGCTTCAGATAAGCCATATTCTTTCGCTAACC CTCGAACAGAACGTCCAGTTTGATTCAGTTCAACAATCATTTGTTTAAAATTTTCTTCAT ATCGGGTCATAAAAATTCATCCTCTCGTAGATAAGTTTAATTTATTCTTGTCTCTACGAA AAGCTGTCTAAGATTTGATACTAACACCAAATGTTGTATACCCCCAAACAATACACATAT TTTGAAGGATTAGGATTAATAAAGCTAAAAATATAGTAAGTATACTAAATATATTTACTA TATCTAGTATACTTACTATATTTTAATCTTTTGATCGTCTATTATATATAATCCGTTCCT CGTCGTTTAAAGTATCAACATAGGCGTCCATTGCAAGTTTGACTATTTCATACATAGGAA TATCTTTTGCATAACTAAGATCCCGAATGGTTTTTAGTACGGGAGGATCTACTTGAACTG GTTTTCTTTCTTTCGCAGTGTACTTTCGTTCCCCTAACTCGACATTAATATCATCTTTAA TTGAAATATCTTCAGCACCAATTTTCTTCTTATCTTTGTTCGTTGGTAATAATGCCATTT AGTTTAATCTCCTTTCCAAGAGGTAGGATATGATTGGCCATTGAGTCAGCATATTTAGGT GTATAATCAAATCCTTCAATATCACCATGTTGTTCATAGTATTCAATTCTTTCTTCTAAT TCTGTAAAGATGTCTGCAAAAATAGCCCACCATCTTCGATCTACATAATCATTTAATTGG ATACCATTCTCACCATACATTTCTAACCGATCCGAGCCTTTAACAATGCTTTTAAAAATG TTTGATTCACCATACTTATCAATTGTTTTTTGATAGTTTGCGTGTTGAGAGGAACGTCGC ACTGAGAAAAGAACAGGCAAAATTCCAATGATTTGAAGATGAGACTCTTCAAAATTCGTG ACAATCGGAACTAAAACTTTATTAATAAAATCTTCTGTTCCTTCCATTGCGTACCGTTTT AATTCTTGCATTGCAATAATATAATCTGCAGCAGTTAAGAATGCACGAACCACATTATCT GTTGATGGTGGGCAGTCGATAAAGATATAATCGAAATTTTTTCTCAATTCTTCTAAAGGT TTAATGAAGGCCAATGATCTCTTACGACGATCAGGATATTTTTCGGACAAGTATTCATTA AGTTCTTCAGATCCAGGAGAGCCAGCCATAATATATAAATGTGGACTTACTTGAGTAATA CCTGAAACCCAGTCCCCTTTTTTGATTGCTGCAGACATGGATCGATCAAAGCTAGTAATT TGATACGTTGATCCAATGTTGGAAGTAGTATTTCTTTGTTGGTCATAATCAATTAGCAAC ACGTCTTTTTCAAAAAGTTGACTAGAAACAATCGCTAATAAATCATTGTCTGTAGTCTTA CCAATGCCGCCTTTTCTACCTGTAAGCATTACAACTTTTCCTAGTTTATCTGATGTTTTA AATGCAGTCCGTAAGTTTTCCATAGTTCCCTCCAATTTCCTATACTAAATATATTTAGTA TACTTCATATACTTAATATATTCGATATATCTAATATACTCCAAATTGATAAGAATTCAG ACTTTATAAGGAATATAGTGGATATACTAAATATATTTGCTATATTCAGTATATCAGATA TATTCAAAATGTCAAAATATATTTGTGCGTTTTGCGTTGACAATTTAGAGTGAAAAGAGG TAAACTTAATTCTATAGAAACCACAGATAATTC
Region Details
Region | 1 |
Region Length | 17.7Kb |
Completeness(score) | intact(100) |
Specific Keyword | integrase,tail,recombinase,transposase |
Region Position | 32115-49907 |
# tRNA | 0 |
# Total Proteins | 20 |
# Phage Hit Proteins | 11 |
# Hypothetical Proteins | 5 |
Phage + Hypothetical Protein % | 80% |
# Bacterial Proteins | 4 |
Attachment Site | yes |
# Phage Species | 7 |
Most Common Phage Name(hit genes count) | PHAGE_Bacter_Sitara_NC_028854(2) PHAGE_Paenib_PBL1c_NC_048689(2) PHAGE_Staphy_SPbeta_like_NC_029119(2) PHAGE_Paenib_Xenia_NC_028837(2) PHAGE_Lactob_phiAT3_NC_005893(2) PHAGE_Escher_RCS47_NC_042128(2) PHAGE_Paenib_Shelly_NC_041909(2) PHAGE_Bacter_Diva_NC_028788(2) PHAGE_Natria_PhiCh1_NC_004084(1) PHAGE_Cronob_CR5_NC_021531(1) PHAGE_Entero_EF62phi_NC_017732(1) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Clostr_phiMMP04_NC_019422(1) PHAGE_Brevib_Sundance_NC_028749(1) PHAGE_Clostr_phiCD6356_NC_015262(1) PHAGE_Lactob_Lb_NC_047983(1) PHAGE_Entero_mEp237_NC_019704(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Clostr_phiCD111_NC_028905(1) PHAGE_Clostr_phiCD38_2_NC_015568(1) |
First Most Common Phage # | 2 |
First Most Common Phage % | 10% |
GC % | 35.13% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Score: | The score of the region based on the above criteria. |
# Total Proteins: | The number of ORFs present in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|X92945.2| Enterococcus faecalis plasmid pRE25 DNA. 50237, gc%: 34.05%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 24 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | 32115..32126 | attL | 0.0 | Showinfo_outline |
2 | 34451..34475 | attL | 0.0 | Showinfo_outline |
3 | 35137..35823 | PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; -; phage(gi985761246) | 1.13e-90 | Showinfo_outline |
4 | 36346..37215 | hypothetical protein; - | 0.0 | Showinfo_outline |
5 | 37296..37721 | hypothetical protein; - | 0.0 | Showinfo_outline |
6 | 37965..38873 | aminoglycoside 6-adenylyltranserase; - | 0.0 | Showinfo_outline |
7 | 38870..39412 | PHAGE_Cronob_CR5_NC_021531: putative ribosomal-protein-alanine N-acetyltransferase; -; phage(gi514051406) | 9.87e-06 | Showinfo_outline |
8 | 39505..40299 | aminoglycoside phosphotransferase type III; - | 0.0 | Showinfo_outline |
9 | 40575..41147 | hypothetical protein; - | 0.0 | Showinfo_outline |
10 | 41445..42341 | PHAGE_Lactob_Lb_NC_047983: minor tail protein; -; phage(gi100055) | 3.57e-23 | Showinfo_outline |
11 | 42344..42368 | attR | 0.0 | Showinfo_outline |
12 | 42666..42938 | hypothetical protein; - | 0.0 | Showinfo_outline |
13 | 42940..43149 | hypothetical protein; - | 0.0 | Showinfo_outline |
14 | 43219..43905 | PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; -; phage(gi985761246) | 1.13e-90 | Showinfo_outline |
15 | 44103..44708 | putative cell filamentation protein; - | 0.0 | Showinfo_outline |
16 | 44724..45296 | PHAGE_Clostr_phiCD38_2_NC_015568: recombinase/resolvase; -; phage(gi333798162) | 1.76e-49 | Showinfo_outline |
17 | complement(45769..46311) | PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; -; phage(gi48697274) | 4.16e-65 | Showinfo_outline |
18 | complement(46442..47604) | PHAGE_Bacter_Diva_NC_028788: transposase-like protein; -; phage(gi971743572) | 2.08e-82 | Showinfo_outline |
19 | complement(46442..47278) | PHAGE_Bacter_Diva_NC_028788: transposase-like protein; -; phage(gi971743572) | 1.60e-80 | Showinfo_outline |
20 | complement(47314..47604) | PHAGE_Paenib_PBL1c_NC_048689: holin; -; phage(gi100034) | 4.10e-33 | Showinfo_outline |
21 | complement(48010..48264) | PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; -; phage(gi48697273) | 8.23e-11 | Showinfo_outline |
22 | complement(48457..48732) | putative PrgO protein; - | 0.0 | Showinfo_outline |
23 | complement(48704..49657) | PHAGE_Lactob_Lb_NC_047983: minor tail protein; -; phage(gi100055) | 2.53e-22 | Showinfo_outline |
24 | 49907..49918 | attR | 0.0 | Showinfo_outline |
Sequence
>32115..32126
CACTATTTACAA
Sequence
>34451..34475
TCACAAATCACAAGTGATTAATCAC
Sequence
>35137..35823
EnterococcusfaecalisMTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
Sequence
>36346..37215
EnterococcusfaecalisMVDNIIKSVAEKLSSLSYIEGIVLGGSRARGTHTEDSDIDIGIYYNSESFDINTINQFATKLDDEHRNNLVVPPGAWGDWINGGGWLVINGYHVDLILRDIKRVEQIMKDTEHGIVTANYQTGHPHGYISAMYRGELAISKILYAKNESLCELKKQAETYPNALQKSLVNFFMFEAGFSLMFVKANSGTDDKYYIAGHVFRIVSCLNQVLFACNNAYCINEKKAIKLLETFEHKPEKYTEKVNHIFEVLGISLFECYDMTEKLYNEVNEIVSEINNFLNEESSDERKQI
Sequence
>37296..37721
EnterococcusfaecalisMKKMLPDFKGKRVLDLGCGYGWHCIYAMENGASSVVGVDISHKMLEVAKGKTHFPQIEYECCAIEDVDFPEESFDVILSSLAFHYVADYENLIKKIYRMLKAGGNLVFTVEHPVFTAHGTQDWYYNRKRRNTAFPGGQLLL
Sequence
>37965..38873
EnterococcusfaecalisMRSEKEMMDLVLSLAEQDERIRIVTLEGSRANINIPKDEFQDYDITYFVSDIEPFISNDDWLNQFGNIIMMQKPEDMELFPPEEKGFSYLMLFDDYNKIDLTLLPLEELDNYLKGDKLIKVLIDKDCRIKRDIVPTDIDYHVRKPSAREYDDCCNEFWNVTPYVIKGLCRKEILFAIDHFNQIVRHELLRMISWKVGIETGFKLSVGKNYKFIERYISEDLWEKLLSTYRMDSYENIWEALFLCHQLFRAVSGEVAERLHYAYPEYDRNITKYTRDMYKKYTGKTGCLDSTYAADIEERREQ
Sequence
>38870..39412
EnterococcusfaecalisMITEMKAGHLKDIDKPSEPFEVIGKIIPRYENENWTFTELLYEAPYLKSYQDEEDEEDEEADCLEYIDNTDKIIYLYYQDDKCVGKVKLRKNWNRYAYIEDIAVCKDFRGQGIGSALINISIEWAKHKNLHGLMLETQDNNLIACKFYHNCGFKIGSVDTMLYANFENNFEKAVFWYLRF
Sequence
>39505..40299
EnterococcusfaecalisMAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF
Sequence
>40575..41147
EnterococcusfaecalisMNRINRVTSILIQLQSKKIIPAKEIAQRFNISLRTVYRDIRTLEEAGIPIGSEAGKGYFLVEGFLLPPVMFTAAEVGALITAGKFLNCHGDESFIKDFDSAMYKIKSILKHGEKNYAQELENSINVYSTSGQKNTLADNVIAAIQTAICNKRVISIQYPASGGQEPESRMIEPISLGFYEQNWYLIGFAG
Sequence
>41445..42341
EnterococcusfaecalisMIQYYYTKKEWGVVMEKEKLKILEELRRILNNKNEAIIILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQATLTKDLAKTFEVELPRVNFYEGLKNGNLASSIIHLTDNLDLIPGTFDLMLLPKLTRSWTFENESRLLATLLAPLKSDYDLIIIDTVPTPSVYTNNAIVASDYVMIPLQAEEESTNNIQNYISYLIDLQEQFNPGLDMIGFVPYLVDTDSATIKSNLEELYKEHKEDNLVFRNIIKRSNKVSTWSKNGITEHKGYDKKVLSMYENVFFEMIERIIQLENEKE
Sequence
>42344..42368
TCACAAATCACAAGTGATTAATCAC
Sequence
>42666..42938
EnterococcusfaecalisMAVTYEKTFEIEIINELSASVYNRVLNYVLNHELDTKNTRLLEVNLLNQLEVAQEVDLFQQPFEELQAIHEYWRSMNQYSKQILNKEKVA
Sequence
>42940..43149
EnterococcusfaecalisMANITDFTEKQFEDRLEKNVERLTKNRLAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFK
Sequence
>43219..43905
EnterococcusfaecalisMTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
Sequence
>44103..44708
EnterococcusfaecalisMILENKLGLTNQVELAKVEEKLSKQKAKELYDCGKINEIEVGTFKGLSEIHEFLFSDIYDFAGKIRSVNIAKGNFRFAPVMYLEHSLQHIDQMPQTSFEEIIKKYVEMNIAHPFREGNGRSTRIWLDLILKEELQKVVDWNLIDKADYLSAMERSPINDLEIRYLISNALTDKIDDRELYMKGIDVSYFYEGYSEYTIDDL
Sequence
>44724..45296
EnterococcusfaecalisMTKYGYARVSTASQSTKEQIQQLLENGVEKKNIFSEKFTGTKRDRPKFNQLLAGLKPGDEIVVTKLDRFARNTREALEIIEPLLDDNVTIKVLNLGTIENTSMGRMVTRTLLSVAEMERDMIVERTQEGKMFARKNNPNFREGRPKATITPKKRHAYELLTSGKSYKEVEAITGFSRSTLFRIKKKIEES
Sequence
>complement(45769..46311)
EnterococcusfaecalisISKENLLNQDFSTETICEKWAADITYIPTKKNGWCYLSSIMDLHTKRIISYTFSKRMTVDCVIQTLNKAKIHYHIPEGMILHTDLGSQYTAREVEQWLKTNKIRHSYSRKGTPYDNAGIESFHASLKKEEVYTTSYSDFEEANRALFSYIEGFYNRNRIHSSIHYLTPQEFEELAKEKMA
Sequence
>complement(46442..47604)
EnterococcusfaecalisMSKRTRRTFSQEFKQQIVNLYLAGKPRVEIIREYELTASAFDKWVKQFKTSGSFKEKDNLTPEQKELLELRKRNQQLEMENDILKASSADIRTKRQVIDANKHLYPISAMCRILGLSRQSYYYQSKPKKDESELEEVVAEEFIRSRKAYGSRKIKKALSKRGIQISRRKISRIMKNRGLKSSYTVAYFKVHHSTCNEAKTTNVLNRKFLRDNPLEAIVTDLTYVRVGKKWNYVCFILDLFNREILGYSCGEHKDAVLVKKAFSRIKQPLTEVEIFHTDRGKEFDNQAIDELLTTFDINRSLSHKGCPFDNAVAESTYKSLKVEFVYQYTFETLQQLDLELFDYVNWWNHLRLHGTLGYETPVGYRNQRLAQRILDNELGCANASEAV
Sequence
>complement(46442..47278)
EnterococcusfaecalisMCRILGLSRQSYYYQSKPKKDESELEEVVAEEFIRSRKAYGSRKIKKALSKRGIQISRRKISRIMKNRGLKSSYTVAYFKVHHSTCNEAKTTNVLNRKFLRDNPLEAIVTDLTYVRVGKKWNYVCFILDLFNREILGYSCGEHKDAVLVKKAFSRIKQPLTEVEIFHTDRGKEFDNQAIDELLTTFDINRSLSHKGCPFDNAVAESTYKSLKVEFVYQYTFETLQQLDLELFDYVNWWNHLRLHGTLGYETPVGYRNQRLAQRILDNELGCANASEAV
Sequence
>complement(47314..47604)
EnterococcusfaecalisMSKRTRRTFSQEFKQQIVNLYLAGKPRVEIIREYELTASAFDKWVKQFKTSGSFKEKDNLTPEQKELLELRKRNQQLEMENDILKQAALIFGRRDK
Sequence
>complement(48010..48264)
EnterococcusfaecalisMTRYEENFKQMIVELNQTGRSVRGLAKEYGLSEATIYKWKNLYLPDQSTGLTGKEVAELRKENARLNEELEILKKAAAIFSRKT
Sequence
>complement(48457..48732)
EnterococcusfaecalisMALLPTNKDKKKIGAEDISIKDDINVELGERKYTAKERKPVQVDPPVLKTIRDLSYAKDIPMYEIVKLAMDAYVDTLNDEERIIYNRRSKD
Sequence
>complement(48704..49657)
EnterococcusfaecalisMENLRTAFKTSDKLGKVVMLTGRKGGIGKTTDNDLLAIVSSQLFEKDVLLIDYDQQRNTTSNIGSTYQITSFDRSMSAAIKKGDWVSGITQVSPHLYIMAGSPGSEELNEYLSEKYPDRRKRSLAFIKPLEELRKNFDYIFIDCPPSTDNVVRAFLTAADYIIAMQELKRYAMEGTEDFINKVLVPIVTNFEESHLQIIGILPVLFSVRRSSQHANYQKTIDKYGESNIFKSIVKGSDRLEMYGENGIQLNDYVDRRWWAIFADIFTELEERIEYYEQHGDIEGFDYTPKYADSMANHILPLGKEIKLNGIITNEQR
Sequence
>49907..49918
CACTATTTACAA
Enterococcus faecalis plasmid pRE25 DNA
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 50237 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: attL (Region 1)
Locus: attLORF Start: 32115
ORF Stop: 32126
Strand: Forward
Protein Sequence: CACTATTTACAA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: attL (Region 1)
Locus: attLORF Start: 34451
ORF Stop: 34475
Strand: Forward
Protein Sequence: TCACAAATCACAAGTGATTAATCAC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 3: PHAGE_Staphy_SPbeta_like_NC_029119 integrase core domain protein (Region 1)
Locus: PHAGE_Staphy_SPbeta_like_NC_029119 integrase core domain proteinORF Start: 35137
ORF Stop: 35823
Strand: Forward
Protein Sequence: MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: PHAGE_Staphy_SPbeta_like_NC_029119 integrase core domain protein, -, phage(gi985761246), PHAGE_Staphy_SPbeta_like_NC_029119
Homolog/Ortholog E-Value: 1.13e-90
Locus 4: (Region 1)
Locus: ORF Start: 36346
ORF Stop: 37215
Strand: Forward
Protein Sequence: MVDNIIKSVAEKLSSLSYIEGIVLGGSRARGTHTEDSDIDIGIYYNSESFDINTINQFATKLDDEHRNNLVVPPGAWGDWINGGGWLVINGYHVDLILRDIKRVEQIMKDTEHGIVTANYQTGHPHGYISAMYRGELAISKILYAKNESLCELKKQAETYPNALQKSLVNFFMFEAGFSLMFVKANSGTDDKYYIAGHVFRIVSCLNQVLFACNNAYCINEKKAIKLLETFEHKPEKYTEKVNHIFEVLGISLFECYDMTEKLYNEVNEIVSEINNFLNEESSDERKQI
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: , hypothetical protein, -
Homolog/Ortholog E-Value: N/A
Locus 5: (Region 1)
Locus: ORF Start: 37296
ORF Stop: 37721
Strand: Forward
Protein Sequence: MKKMLPDFKGKRVLDLGCGYGWHCIYAMENGASSVVGVDISHKMLEVAKGKTHFPQIEYECCAIEDVDFPEESFDVILSSLAFHYVADYENLIKKIYRMLKAGGNLVFTVEHPVFTAHGTQDWYYNRKRRNTAFPGGQLLL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: , hypothetical protein, -
Homolog/Ortholog E-Value: N/A
Locus 6: 37965 (Region 1)
Locus: 37965ORF Start: 37965
ORF Stop: 38873
Strand: Forward
Protein Sequence: MRSEKEMMDLVLSLAEQDERIRIVTLEGSRANINIPKDEFQDYDITYFVSDIEPFISNDDWLNQFGNIIMMQKPEDMELFPPEEKGFSYLMLFDDYNKIDLTLLPLEELDNYLKGDKLIKVLIDKDCRIKRDIVPTDIDYHVRKPSAREYDDCCNEFWNVTPYVIKGLCRKEILFAIDHFNQIVRHELLRMISWKVGIETGFKLSVGKNYKFIERYISEDLWEKLLSTYRMDSYENIWEALFLCHQLFRAVSGEVAERLHYAYPEYDRNITKYTRDMYKKYTGKTGCLDSTYAADIEERREQ
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 37965, aminoglycoside 6-adenylyltranserase, -
Homolog/Ortholog E-Value: N/A
Locus 7: PHAGE_Cronob_CR5_NC_021531 putative ribosomal-protein-alanine N-acetyltransferase (Region 1)
Locus: PHAGE_Cronob_CR5_NC_021531 putative ribosomal-protein-alanine N-acetyltransferaseORF Start: 38870
ORF Stop: 39412
Strand: Forward
Protein Sequence: MITEMKAGHLKDIDKPSEPFEVIGKIIPRYENENWTFTELLYEAPYLKSYQDEEDEEDEEADCLEYIDNTDKIIYLYYQDDKCVGKVKLRKNWNRYAYIEDIAVCKDFRGQGIGSALINISIEWAKHKNLHGLMLETQDNNLIACKFYHNCGFKIGSVDTMLYANFENNFEKAVFWYLRF
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Cronob_CR5_NC_021531 putative ribosomal-protein-alanine N-acetyltransferase, -, phage(gi514051406), PHAGE_Cronob_CR5_NC_021531
Homolog/Ortholog E-Value: 9.87e-06
Locus 8: 39505 (Region 1)
Locus: 39505ORF Start: 39505
ORF Stop: 40299
Strand: Forward
Protein Sequence: MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 39505, aminoglycoside phosphotransferase type III, -
Homolog/Ortholog E-Value: N/A
Locus 9: (Region 1)
Locus: ORF Start: 40575
ORF Stop: 41147
Strand: Forward
Protein Sequence: MNRINRVTSILIQLQSKKIIPAKEIAQRFNISLRTVYRDIRTLEEAGIPIGSEAGKGYFLVEGFLLPPVMFTAAEVGALITAGKFLNCHGDESFIKDFDSAMYKIKSILKHGEKNYAQELENSINVYSTSGQKNTLADNVIAAIQTAICNKRVISIQYPASGGQEPESRMIEPISLGFYEQNWYLIGFAG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: , hypothetical protein, -
Homolog/Ortholog E-Value: N/A
Locus 10: PHAGE_Lactob_Lb_NC_047983 minor tail protein (Region 1)
Locus: PHAGE_Lactob_Lb_NC_047983 minor tail proteinORF Start: 41445
ORF Stop: 42341
Strand: Forward
Protein Sequence: MIQYYYTKKEWGVVMEKEKLKILEELRRILNNKNEAIIILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQATLTKDLAKTFEVELPRVNFYEGLKNGNLASSIIHLTDNLDLIPGTFDLMLLPKLTRSWTFENESRLLATLLAPLKSDYDLIIIDTVPTPSVYTNNAIVASDYVMIPLQAEEESTNNIQNYISYLIDLQEQFNPGLDMIGFVPYLVDTDSATIKSNLEELYKEHKEDNLVFRNIIKRSNKVSTWSKNGITEHKGYDKKVLSMYENVFFEMIERIIQLENEKE
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: PHAGE_Lactob_Lb_NC_047983 minor tail protein, -, phage(gi100055), PHAGE_Lactob_Lb_NC_047983
Homolog/Ortholog E-Value: 3.57e-23
Locus 11: attR (Region 1)
Locus: attRORF Start: 42344
ORF Stop: 42368
Strand: Forward
Protein Sequence: TCACAAATCACAAGTGATTAATCAC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 12: (Region 1)
Locus: ORF Start: 42666
ORF Stop: 42938
Strand: Forward
Protein Sequence: MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELDTKNTRLLEVNLLNQLEVAQEVDLFQQPFEELQAIHEYWRSMNQYSKQILNKEKVA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: , hypothetical protein, -
Homolog/Ortholog E-Value: N/A
Locus 13: (Region 1)
Locus: ORF Start: 42940
ORF Stop: 43149
Strand: Forward
Protein Sequence: MANITDFTEKQFEDRLEKNVERLTKNRLAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: , hypothetical protein, -
Homolog/Ortholog E-Value: N/A
Locus 14: PHAGE_Staphy_SPbeta_like_NC_029119 integrase core domain protein (Region 1)
Locus: PHAGE_Staphy_SPbeta_like_NC_029119 integrase core domain proteinORF Start: 43219
ORF Stop: 43905
Strand: Forward
Protein Sequence: MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: PHAGE_Staphy_SPbeta_like_NC_029119 integrase core domain protein, -, phage(gi985761246), PHAGE_Staphy_SPbeta_like_NC_029119
Homolog/Ortholog E-Value: 1.13e-90
Locus 15: 44103 (Region 1)
Locus: 44103ORF Start: 44103
ORF Stop: 44708
Strand: Forward
Protein Sequence: MILENKLGLTNQVELAKVEEKLSKQKAKELYDCGKINEIEVGTFKGLSEIHEFLFSDIYDFAGKIRSVNIAKGNFRFAPVMYLEHSLQHIDQMPQTSFEEIIKKYVEMNIAHPFREGNGRSTRIWLDLILKEELQKVVDWNLIDKADYLSAMERSPINDLEIRYLISNALTDKIDDRELYMKGIDVSYFYEGYSEYTIDDL
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 44103, putative cell filamentation protein, -
Homolog/Ortholog E-Value: N/A
Locus 16: PHAGE_Clostr_phiCD38_2_NC_015568 recombinase/resolvase (Region 1)
Locus: PHAGE_Clostr_phiCD38_2_NC_015568 recombinase/resolvaseORF Start: 44724
ORF Stop: 45296
Strand: Forward
Protein Sequence: MTKYGYARVSTASQSTKEQIQQLLENGVEKKNIFSEKFTGTKRDRPKFNQLLAGLKPGDEIVVTKLDRFARNTREALEIIEPLLDDNVTIKVLNLGTIENTSMGRMVTRTLLSVAEMERDMIVERTQEGKMFARKNNPNFREGRPKATITPKKRHAYELLTSGKSYKEVEAITGFSRSTLFRIKKKIEES
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Clostr_phiCD38_2_NC_015568 recombinase/resolvase, -, phage(gi333798162), PHAGE_Clostr_phiCD38_2_NC_015568
Homolog/Ortholog E-Value: 1.76e-49
Locus 17: PHAGE_Lactob_phiAT3_NC_005893 putative transposase OrfB (Region 1)
Locus: PHAGE_Lactob_phiAT3_NC_005893 putative transposase OrfBORF Start: 45769
ORF Stop: 46311
Strand: Backward
Protein Sequence: ISKENLLNQDFSTETICEKWAADITYIPTKKNGWCYLSSIMDLHTKRIISYTFSKRMTVDCVIQTLNKAKIHYHIPEGMILHTDLGSQYTAREVEQWLKTNKIRHSYSRKGTPYDNAGIESFHASLKKEEVYTTSYSDFEEANRALFSYIEGFYNRNRIHSSIHYLTPQEFEELAKEKMA
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PHAGE_Lactob_phiAT3_NC_005893 putative transposase OrfB, -, phage(gi48697274), PHAGE_Lactob_phiAT3_NC_005893
Homolog/Ortholog E-Value: 4.16e-65
Locus 18: PHAGE_Bacter_Diva_NC_028788 transposase-like protein (Region 1)
Locus: PHAGE_Bacter_Diva_NC_028788 transposase-like proteinORF Start: 46442
ORF Stop: 47604
Strand: Backward
Protein Sequence: MSKRTRRTFSQEFKQQIVNLYLAGKPRVEIIREYELTASAFDKWVKQFKTSGSFKEKDNLTPEQKELLELRKRNQQLEMENDILKASSADIRTKRQVIDANKHLYPISAMCRILGLSRQSYYYQSKPKKDESELEEVVAEEFIRSRKAYGSRKIKKALSKRGIQISRRKISRIMKNRGLKSSYTVAYFKVHHSTCNEAKTTNVLNRKFLRDNPLEAIVTDLTYVRVGKKWNYVCFILDLFNREILGYSCGEHKDAVLVKKAFSRIKQPLTEVEIFHTDRGKEFDNQAIDELLTTFDINRSLSHKGCPFDNAVAESTYKSLKVEFVYQYTFETLQQLDLELFDYVNWWNHLRLHGTLGYETPVGYRNQRLAQRILDNELGCANASEAV
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PHAGE_Bacter_Diva_NC_028788 transposase-like protein, -, phage(gi971743572), PHAGE_Bacter_Diva_NC_028788
Homolog/Ortholog E-Value: 2.08e-82
Locus 19: PHAGE_Bacter_Diva_NC_028788 transposase-like protein (Region 1)
Locus: PHAGE_Bacter_Diva_NC_028788 transposase-like proteinORF Start: 46442
ORF Stop: 47278
Strand: Backward
Protein Sequence: MCRILGLSRQSYYYQSKPKKDESELEEVVAEEFIRSRKAYGSRKIKKALSKRGIQISRRKISRIMKNRGLKSSYTVAYFKVHHSTCNEAKTTNVLNRKFLRDNPLEAIVTDLTYVRVGKKWNYVCFILDLFNREILGYSCGEHKDAVLVKKAFSRIKQPLTEVEIFHTDRGKEFDNQAIDELLTTFDINRSLSHKGCPFDNAVAESTYKSLKVEFVYQYTFETLQQLDLELFDYVNWWNHLRLHGTLGYETPVGYRNQRLAQRILDNELGCANASEAV
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PHAGE_Bacter_Diva_NC_028788 transposase-like protein, -, phage(gi971743572), PHAGE_Bacter_Diva_NC_028788
Homolog/Ortholog E-Value: 1.60e-80
Locus 20: PHAGE_Paenib_PBL1c_NC_048689 holin (Region 1)
Locus: PHAGE_Paenib_PBL1c_NC_048689 holinORF Start: 47314
ORF Stop: 47604
Strand: Backward
Protein Sequence: MSKRTRRTFSQEFKQQIVNLYLAGKPRVEIIREYELTASAFDKWVKQFKTSGSFKEKDNLTPEQKELLELRKRNQQLEMENDILKQAALIFGRRDK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Paenib_PBL1c_NC_048689 holin, -, phage(gi100034), PHAGE_Paenib_PBL1c_NC_048689
Homolog/Ortholog E-Value: 4.10e-33
Locus 21: PHAGE_Lactob_phiAT3_NC_005893 putative transposase A (Region 1)
Locus: PHAGE_Lactob_phiAT3_NC_005893 putative transposase AORF Start: 48010
ORF Stop: 48264
Strand: Backward
Protein Sequence: MTRYEENFKQMIVELNQTGRSVRGLAKEYGLSEATIYKWKNLYLPDQSTGLTGKEVAELRKENARLNEELEILKKAAAIFSRKT
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PHAGE_Lactob_phiAT3_NC_005893 putative transposase A, -, phage(gi48697273), PHAGE_Lactob_phiAT3_NC_005893
Homolog/Ortholog E-Value: 8.23e-11
Locus 22: 48457 (Region 1)
Locus: 48457ORF Start: 48457
ORF Stop: 48732
Strand: Backward
Protein Sequence: MALLPTNKDKKKIGAEDISIKDDINVELGERKYTAKERKPVQVDPPVLKTIRDLSYAKDIPMYEIVKLAMDAYVDTLNDEERIIYNRRSKD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 48457, putative PrgO protein, -
Homolog/Ortholog E-Value: N/A
Locus 23: PHAGE_Lactob_Lb_NC_047983 minor tail protein (Region 1)
Locus: PHAGE_Lactob_Lb_NC_047983 minor tail proteinORF Start: 48704
ORF Stop: 49657
Strand: Backward
Protein Sequence: MENLRTAFKTSDKLGKVVMLTGRKGGIGKTTDNDLLAIVSSQLFEKDVLLIDYDQQRNTTSNIGSTYQITSFDRSMSAAIKKGDWVSGITQVSPHLYIMAGSPGSEELNEYLSEKYPDRRKRSLAFIKPLEELRKNFDYIFIDCPPSTDNVVRAFLTAADYIIAMQELKRYAMEGTEDFINKVLVPIVTNFEESHLQIIGILPVLFSVRRSSQHANYQKTIDKYGESNIFKSIVKGSDRLEMYGENGIQLNDYVDRRWWAIFADIFTELEERIEYYEQHGDIEGFDYTPKYADSMANHILPLGKEIKLNGIITNEQR
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: PHAGE_Lactob_Lb_NC_047983 minor tail protein, -, phage(gi100055), PHAGE_Lactob_Lb_NC_047983
Homolog/Ortholog E-Value: 2.53e-22
Locus 24: attR (Region 1)
Locus: attRORF Start: 49907
ORF Stop: 49918
Strand: Forward
Protein Sequence: CACTATTTACAA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download