Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1213965953 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1213965953.PHASTER.zip
gi|00000000|ref|NZ_NIDM01000035.1| Klebsiella pneumoniae strain SCPM-O-B-7851 (KPI-3014) map 42013, gc%: 42.77%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 7.9Kb | incomplete | 10 | 13 | 27663-35650 info_outline | PHAGE_Burkho_KL3_NC_015266(2) | 45.23% | Show info_outline |
Region DNA
>1 27663-35650 ATGTCTGAAAAGATAATCAAAAGGGGGGGGGAGCTCATAGAGTTGCCCTCTCATAACAACAATGCCGTAA AAACCGAGATGCAGACCAGGACAGAAAAACCCAAAACGAAAATCACCAAAGCGCAAAGAGAAGAACTCAG ATTAAAATTTGCGTGCAGGTGTGCCTACTGCGGCTGTGAGCTGAAGGAAAAGGGCTGGCATGCCGATCAT GTAGAGCCAGTTCGTAGAGATTTCGATATAGTTCGCGCGCCCCAGGGGAGTAGGGTGAGTCACGTTGCAC GAAGCAATGGACGAGTATTTCATCCTGATCGCCATGATTTAGATAATCTTTTCCCCGCGTGTTCAGCATG CAACCTTTTCAAAGCGACATATTCAATCGAAGGATTCAGGGAACAGATTGCCCACCAGCCTGAGCGTGCT CAGGCATACTCAGTCAATTTCCGCACAGCCCAACGATTTGGGCTGGTAACGGTTATTGAGAAACCTGTGG TTTTCTGGTTTGAGGCGTACGATGCCTCAAAAGAACTTGAACCCCAGCTTTCTTATTTTTTGGCACACCG GGAGGCTTATCAGGATTGAGGTTTGCTGTCTTTTCTTGGACTGATGTCGGCTTCTTTAATCCGTTCCTCA GCTTGCATTCCGGTATAGATACATATAGCACTATTGTAATTATTAAAAGCAATCTGACTTTTGAAATCAC AAAAATATGCAGGGTTCTTTGTCGCTATAGTATCGCCTTTCTGGCACTTCCCCTTCAGGCCTTCAATCAA TGAGTCATTATCGGTGCCCATACATGCTTTGCCAGTTGGGGTTATACCTTCTTCCTTACAGCCAGAAAGA AAGACTGTGGCACAGATCAACACTGTAAGCATTTTTTTTTGCATTGTTCCCATTCCCTGTTATACATGGT TTTTCAATTATAGACATTACCTGGTCTGATGCATCTACCAGTAATTGTATCGCGTCTATCTGGCTTAATG CCTCAACATGGTAAAAACGGATAAACGCATGCCATCTCAGCTCCCCCTTGACCCAAAACTTCCGGCCAAT TTTGATGACACCCCTAATAGTGAACGAAGCAAAGAACAGCTAGATGAATGGTGGGATCATCCTTATGGGA TCACTAAACCAGACGGCTCATTTACTGACAGATGTCTTAACGGTGGAGCGAGGGACCGCTCATCGGTGCT TGGAAAGGTAAGAACTTACGAAGCGGCTTGTGTCCTGGCTCACGACGCCCAGGCAAAATGGGTCAAAACC CGTCTGAAACCTATCTTCATGTACTCTAACGAACCGCCCTTCAGGCTAGTGGTTCAGTCCCAGCGACCAG ATTACGAAGAAAGCATCATTGGGGAGTTCAATACTATTGATGAAATTAATTTGTTCTTGTTAAAGCAGCA CCCCACCCGAACTACTTGAATTACCTCCGACCATCGACACAAAACTCATTGATCTTGAGACCCTGGCCTG GTATGGGAAAGAGCTTGATCTCGCTGCCTCCAGACTAAAGGCTGAGCTTATGGCCATTTCTGTTTTGCGT GAGGAGGTCAGTATGGCCGTTCGTAGGAAAAAAGGAGACGCCAGTTAGCGGCGGACTGTGGGATTACCGG CGTTTATCAATAGTGTCAACTATCAAGCTTATGTAAGCAGACCTCGAATCTTCACTGTCGGACTGTCTTG CATAGGCTTTTTTTATTGCTCCATCGGAGAGTGGATGCTTCATATTGAGGAATAACATTACCACCAACAC ATCAATACAGCGGGCGGATGCAAAATACTCATAGATATAATCGTACGTCGTTTTTTTAAAATCGCCCCCC ACTGAGCCGAGGTCAATCAGCGCTGCGATTATCTCTCCTGCCTCGCCATTCCTAACAGTTGGCTTCAACT GGCTTAGTTTTCGTTTCAGAGCCTCCTCGCGATCTCGTTGTTGCTGTAGATAATCAGAAAGGCTATTAAA CATTCAAACTGGTCCTGTGCATTCTAATCCCACCTATCATACGGACATTCTTAAAATCTTGGAACCAGGG AAAGATACGGTCGGATCTAGACCGGTGGTGGGGGAGTATCGACTTTTACCTTTCGAAAACACAGTCGTTT TATGAAAGGGGTTGCTGCGTACCTAAAATAAGGTACAATTTGTTTGAAAGGGAAGGCCACGGAGCCGCCC ATTAACTGCCTAAGGAGGCGTTCATGTCAACTATCCCTCAATTAGCTAAGCTGGGTTTTTCCTCAGATGT TGTTCCTGTGATCAATACCCCAGCGCCCAATATGACTCGCGGATTTGAGCGCTTTCATATCAGCTATAAC AGTTCATCTGCCGGGTATGGCTGCGATACAACCGCTCTGGTTCTGGATGGCCGTGTGTTTTTCGTACTGA ACGGGGACCATGCCTGTGATATGACCAAAGCTGCCGCAGCACGCGGTATCGATGGCTGCATTGACGTCTT CATAGACCGTATCGAGTCGGCTAGTCGACACAGCGAGCATAAAATGGCTATTGGTCTGACAAACGATGAG TTCGGATTGATGCCGACCGCGCTCGCTGTCATCGGAGAAGAGAACATCCTCCGTCTTCTATCTGCTGTGA CAGGAAACGTTCAGGACTTTTCAGCGTACGGTATTAATCAGGATTAACCATTCTCAGCCCCTACTGACCC ATAACTTTTGAGGCTTGTATGAAACTTGAAGATTTAACAGGTGACGACCGTACTCTGGTTGTAGTCGCTC TCCAGGCTCTTTTCCGGGAGCGAAGTAACTCATATCATGCAGCCTGCACCGCCTGCCAGCTTGCAGGCGA GAAACCACCAGCTGAGAATCTTTTTTGCGTGGAGGAAAGTATTTCGGCAATTCGCCGGATGGGAGCTCTC CCGCAGAGATGAAGCCAGATATGAAATCAACCAATGAGAACGAAAACAGACGCGGATTGCTCATCAGTGC AGGTCAGTTGCTGTTTGGTGAGCGCTGGCAAACAGAACTCGCCAGAGCCCTTGGACTGTCGGACGGCAGA CGCATCCGGCAGTGGCTTTCTGGTGACAGACCAATACCTGTCGGTATATGGGATGACCTGCGTGAACTCC TGGAGGACAGAAGCTCCAAAATGGAGCTGATAGTTAAACAGATTCAAGCCAGTAAGAAAGATAAAATGTA GGTACCTGCAGCTGACCATTAACAGGAGGCATAATGACGCAACAATTTTCTCCTCCGTATGAGGTGGTGG AAATGTCCCGGCGTATTTTTGAAAATTTAATCTCCAGTACTCTTAAGACATCTGATACCACAGGAACCTG CATGTATGGTTCGATTCTGGTATCCATGCTCCTGGAGAAATTTTCAGGTGTCAGGACACGTATCGCCGGT GGAGATGGTGTTGATGATGGTGGAATACTTACTGCCGCCGGTATGAAAGGGCATTATTGGGTTGTTGCCA ACGTAAATGGAATGCTCTTTGTTGTCGATATCACGGCAGATCAGTTTGGCATGGACAAAATCGTATACAA AGGGCTAAAGGATGCTCCAGAGTATATTGAGGGCCACCAAATCACCATTGATGAGCATGTTCATGAGACC CTTCACCAGATCATAGGAAGTTACAGTTCAGAATATAACCAGCTGTGAGTTCTATAAAAAAATTTGGCTA TGTTTTAGGCGAAACTATTCGTTACTAAAGAAGAACAGCATCAGCAGAAAGAGGAGGGGAATTTTTATGG ATAAACGTTACGAGTTGGCTGACAAGCACGGGATGTCCCATGAATTCATCGACTGGTTTTTCGATAAAAA GAAGGATGGTTCTGGGGACCTGTGGTTTGTCATGATGTCGGCAATGTGGGAGGGCTATAAAGCCCGGGAC ACCCATTCGACAAAAGCATTTGCGTACCACCAAGAGCAACAAAATTTTGAAGCATGGTGGGAACAGAACA ACGAAGGGGGGCCTCTCTCTGGTTGGGAGAATCTCCGAGCTAAAGATGGATATAATGACGAAGACATTGA CAAACAATGGGAGGCCTGGCTGGGCAGAGCTCGTTATACTGGTTAAAACCACAGATATTATTTGCGCTGG GTTAAATGAGTGATAAACTATCACGCAGATAACCTGTGGAGGCAATAATGTCTGAATTTGATTCCCTTGC GGAAGAGCTGGTGGAAGAGGCACGTAATGAAGAGGCCAGACAACAGCAAAGGGACCTGTCCCTGATAGGG AAAGTCCTTGAAATCTATGATCAGAAGTTTGTTGCCGAACTTTTGCGTAAGCTGGGAAATTCAGACTGGA CCAGGGAGACCCTGAACCGCTGGATTAACGGGAAATGTGGGCCACGTTCACTTACCGTAACTGAGGCATC GCTTCTTGAAAGACTGCTCCCGCAGCCGCCAGCAAACCATCCCAATTATGCTTTTCGCTTCATCGATCTC TTCGCCGGTATCGGCGGTATCCGTCATGGGTTTGAAGCCATTGGCGGCCAGTGTGTTTTCACAAGTGAAT GGAACAGCTATTCAGTCAAAACTTATAAAGCAAACTGGTACTGCGATCCCGAAGCGCATATCTTCAATTC GGACATCCGCGATGTGACACTCAGTCATAAGGAAGATGTCAGCGAAGAAGATGCCTACGCCCATATCGAT AAATCGATACCCGATCATGATGTTCTGCTGGCTGGTTTCCCGTGTCAGCCCTTTAGCCTTGCAGGTGTGA GCAAAAAAAACTCACTTGGCCGTAAACACGGTTTTGAATGTGACACCCAGGGGACCCTATTCTTTGATGT GGCTCGTATCATCATGGCAAAAAAACCGGCCATCTTTGTACTCGAGAACGTCAAGAACCTCAAAAGCCAT GATAAAGGGAAAACTTTCCGTGTCATTATGGATACCCTGAATGAGCTCGGTTACGACGTTGCTGATGCTG AAGCTACAGGTGCGGATGATCCAAAAGTTATAGATGGTAAGCATTTCATCCCTCAGCACCGGGAGCGTAT TGTTCTGGTGGGCTTCAGACGTGACCTGAATTTAAGTCAGGGATTTAGCCTTGCTGACATTTCTTCGCTG TTTCCTGAAAGAAAAGTGCTGTTCAGAGAACTCCTTGACAGTGATGTTGATGATAAATACACACTAACGC CAAAGCTGTGGGATTATCTCTATAAATACGCCAAAAAACACCAAGAGAAAGGTAATGGCTTTGGCTTTGG CCTGGTTAAACCAGACGATGATAAAGCTATTTCCAGAACAATATCAGCAAGGTATCACAAAGATGGCAGT GAATCGCTTGTTGATCGTGGTTGGGATAGCGAACTCGGTGAAAAAAACTTTAATGACCCTGATAACATGG CCAGACGTCCTCGGCGTCTAACACCGCGTGAGTGTGCCCGGCTAATGGGATTTGAGCAGCCAGGGAAAGT AACTTTTCGAATCCCAGTATCCGATACTCAGGCTTACCGCCAGTTCGGAAATTCCGTCATCGTGCCGGTA TTTGATGCGGTAGCGAAATTGCTGGAGTCACGGATCATCGAGGCTGTAAAGTCTCGGAAATAGTACACTA AAAGAGCCCTGAGGGGCTCTTCATTTATCTGTGCAGGTATTGTTCTGTGCGCATAAAACATTCAATGATA TTAGGGAAGACGTCAAGAATAGAGTTCCTTAATTTCATTGATAAACGCAGACAAAGACATTAACTCTCCT CTAATTTCCTCGGGAAAGGCCTTATGTAACCCTTCCGGTACAACGAGTCGTATGCCCTCAGCCTGCATTT CCCTGAACTGGGCGACAGATACGCCCTGCTGTAGGGTGAACAGGTGTACTGTATCTATTCTGTTAGCCTC ATTCAGTACCTGCCGCCAGCGGTCCTTACAGGTTGTTTTTACCCCCAACATGCGTAACCGTTCTGCCGGG TAGTCAGGATCGCGATAGGCTGCACCGGAAGGGAAGATGAAATCGGGTTTTTTCTTACCTTCTGTGGTGG CCTGCGTTTCGAAGCTCGTTGCGCCGTGTTCGGTGAAAAGGGACTCAAGATGTAGCTCAAGGCTTTTCCC GGCACGAGACTTCCTTCGGTTACTCACCGAGTTAGCAAGCGTAATAAAATCATTCACAGTTGCAAAACCT TTGGCTATCTGCCCCAACACGTGCAGTTCCTCAACGGCAAGGAAAATTTCAAACTCAATTTTTCTTCTTC GCGTCAGTTGAGTATCCGGATCGCTTGTCTTTTTATCGTAATGGCATGCAGCAAAACCAATAATTTCCCT GCCTGAAGGGAAATAGTGATTCCATTCCGGTGGTAACTTATACTTTGTTCTTCCTGGAGGGGTCTCTGTA ACGAACCCTCCAATTATTTTGTCTCCAGGGCCAAATATTGTTGCTCCCGGGATAACTTCACCAATTATTG GTTCAGGAATCTCTTCCTCGCTCAGGTCTTTGCACACCCAGACATCACAATAACTGGAAGATGTTCCTGG CATATGATCGAAGGCGAGAAGTGCCAGAGCGCCGGTATTCTCCGGATTCTGGAGAGGATTTTGTTTACCA AAACCCGTCAGACGCTTTTCATCACGGGTGCCGCCGAAAAATTTATTGTTGTAGTAAATGGCCCTTACAT CATTTAGGTCAGGACAATCAGGATGAGATGACACGTGAACGGAAAAAAGAGCTTCGGGATTTCTTAACTG AGTATCACGGAGGGAGGGGAACAGCTCATCAATGACGGCACCCGGCATGTAAAGACCAGACTGGTGGGAT TTTGTAGCGCCGGTATCGTTAGCGGATAAGCGCTTAACGAATACCCAAACATTCGCAGAACACTTTGTTT GCAACCACTCCGCCAGAAGACTCATTCAAACCACTCCACCATAAACACTCACTGTTTATGAGCGATGTTA CGGATCCTGAGGTAAGAAGCAAGTCTAATGAGACTGAGCAAGACAGCAGGGAAGGAATTTTTAACTATGA ATCCACTTTTATGATCAGAAGGTTATGCATAAAAACATTCAAACACCATTATTGAATGATTTATTTAATC ACTAGTTATCTGAATAAATGTTATCACTATCTTAACATTACATACATAAATTAATTTACATCTGAAAATG ATAATGAAATTAATAACAAACAACATTGTGTAATTTCCTTCTTATAATTTTCCACTGTTTATGAGATGTG TCCCCCTCTTTAATTCAAAATTAGCCGCCTAAAGAAATTTAAGGGATTGACGAAGCGACTTTAAATGCAA GAATAGATATGCACGTTGTTCTTAGTAATGAAAGATACATAGGAAAGAGCTGTGTTTTCGTTCTTAAAGG TCAACATAGTGCGTACAAAATATGTTTTATTACAATCAAAATGCGGGATTTCATTGACTAAACATTTATA TGTGGAAAAATAGATTCATCCCGTATCACTCAAAAAGGTAACATATGATAATCCGTGACAAGATTACCGC AGAATTGAATTACCATGCATCTGTAGAAGGAGAGACGGGTAATATAAAAATGTGTCGCATTATTCTGGGG GCTGTGAACAACATGGTTGTTTACAATACAATGGTAAAGGTAAAGAAAGCACCAGGTTCTGACTCAAAAA CCGATGATGAGCAGTATTTCCACTATGTAAAGCCCTGGGTGGTTCCGTTCATTGAAAAAATGCATGCAGT CAATGACAAATGAATGCAGCATAACTGAAAGGAACAACTCATGGCATTACTGATATCAGCAGACGATCGC ATTACAAGGCTATGCCCTCTGGACATGGAAGGTAGCCGTGATAATGACGGTGCATTCTCGCTTGCAGATA TGCAACAACTGGTCGGTGGTTACATTGAAGCTGTGAAGCTCAACCCTGTAATCGTTCATGAAAACATTCG ATATTGCTGGTTGATTATTAATGAAGAAGGAAAGCTTCTATCCTTACCAGTAAATAAAAATGCAACTCTT CTGGTTAAAAGCGTTATCAGCCCTGGCGACTATATAGTCGGAAATGCGTTGATGCTCGAAGAAACCGAAT TTCAATAG
Region Details
| Region | 1 |
| Region Length | 7.9Kb |
| Completeness(score) | incomplete(10) |
| Specific Keyword | NA |
| Region Position | 27663-35650 |
| # tRNA | 0 |
| # Total Proteins | 13 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 6 |
| Phage + Hypothetical Protein % | 100% |
| # Bacterial Proteins | 0 |
| Attachment Site | no |
| # Phage Species | 6 |
| Most Common Phage Name(hit genes count) | PHAGE_Burkho_KL3_NC_015266(2) PHAGE_Entero_Tyrion_NC_031077(1) PHAGE_Entero_JSE_NC_012740(1) PHAGE_Entero_P1_NC_005856(1) PHAGE_Entero_RB49_NC_005066(1) PHAGE_Salmon_g341c_NC_013059(1) PHAGE_Citrob_Miller_NC_025414(1) PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1) PHAGE_Xantho_OP2_NC_007710(1) PHAGE_Entero_RB43_NC_007023(1) PHAGE_Edward_GF_2_NC_026611(1) PHAGE_Citrob_vB_CfrM_CfP1_NC_031057(1) PHAGE_Salmon_9NA_NC_025443(1) PHAGE_Entero_Phi1_NC_009821(1) PHAGE_Mycoba_PegLeg_NC_021299(1) PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1) PHAGE_Edward_eiAU_183_NC_023555(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Entero_HK225_NC_019717(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 15.38% |
| GC % | 45.23% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NZ_NIDM01000035.1| Klebsiella pneumoniae strain SCPM-O-B-7851 (KPI-3014) map 42013, gc%: 42.77%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 13 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 27663..28241 | PHAGE_Edward_eiAU_183_NC_023555: DNA repair ATPase; CDD88_RS26580; phage(gi589889282) | 1.58e-53 | Showinfo_outline |
| 2 | complement(28232..28546) | hypothetical protein; CDD88_RS26585 | 0.0 | Showinfo_outline |
| 3 | 28671..29081 | PHAGE_Entero_P1_NC_005856: Lxr; CDD88_RS26590; phage(gi46401722) | 3.11e-53 | Showinfo_outline |
| 4 | complement(29266..29625) | hypothetical protein; CDD88_RS26595 | 0.0 | Showinfo_outline |
| 5 | 29856..30299 | hypothetical protein; CDD88_RS26600 | 0.0 | Showinfo_outline |
| 6 | 30341..30544 | hypothetical protein; CDD88_RS26605 | 0.0 | Showinfo_outline |
| 7 | 30553..30813 | PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; CDD88_RS26610; phage(gi971749619) | 1.11e-14 | Showinfo_outline |
| 8 | 30846..31280 | hypothetical protein; CDD88_RS26615 | 0.0 | Showinfo_outline |
| 9 | 31369..31698 | PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; CDD88_RS26620; phage(gi100049) | 8.12e-17 | Showinfo_outline |
| 10 | 31770..33185 | PHAGE_Burkho_KL3_NC_015266: gp47; CDD88_RS26625; phage(gi327198092) | 3.87e-130 | Showinfo_outline |
| 11 | complement(33275..34477) | PHAGE_Burkho_KL3_NC_015266: gp45; CDD88_RS26630; phage(gi327198090) | 5.33e-39 | Showinfo_outline |
| 12 | 35057..35305 | hypothetical protein; CDD88_RS26635 | 0.0 | Showinfo_outline |
| 13 | 35333..35650 | PHAGE_Mycoba_PegLeg_NC_021299: hypothetical protein; CDD88_RS26640; phage(gi508177861) | 5.74e-05 | Showinfo_outline |
Sequence
>27663..28241
[Klebsiellapneumoniae]
Sequence
>complement(28232..28546)
[Klebsiellapneumoniae]
Sequence
>28671..29081
[Klebsiellapneumoniae]
Sequence
>complement(29266..29625)
[Klebsiellapneumoniae]
Sequence
>29856..30299
[Klebsiellapneumoniae]
Sequence
>30341..30544
[Klebsiellapneumoniae]
Sequence
>30553..30813
[Klebsiellapneumoniae]
Sequence
>30846..31280
[Klebsiellapneumoniae]
Sequence
>31369..31698
[Klebsiellapneumoniae]
Sequence
>31770..33185
[Klebsiellapneumoniae]
Sequence
>complement(33275..34477)
[Klebsiellapneumoniae]
Sequence
>35057..35305
[Klebsiellapneumoniae]
Sequence
>35333..35650
[Klebsiellapneumoniae]
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 42013 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Locus 1: CDD88_RS26580 (Region 1)
Locus: CDD88_RS26580ORF Start: 27663
ORF Stop: 28241
Strand: Forward
Protein Sequence: MSEKIIKRGGELIELPSHNNNAVKTEMQTRTEKPKTKITKAQREELRLKFACRCAYCGCELKEKGWHADHVEPVRRDFDIVRAPQGSRVSHVARSNGRVFHPDRHDLDNLFPACSACNLFKATYSIEGFREQIAHQPERAQAYSVNFRTAQRFGLVTVIEKPVVFWFEAYDASKELEPQLSYFLAHREAYQD
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CDD88_RS26580, DNA repair ATPase, phage(gi589889282), PHAGE_Edward_eiAU_183_NC_023555
Homolog/Ortholog E-Value: 1.58e-53
Locus 2: CDD88_RS26585 (Region 1)
Locus: CDD88_RS26585ORF Start: 28232
ORF Stop: 28546
Strand: Backward
Protein Sequence: MQKKMLTVLICATVFLSGCKEEGITPTGKACMGTDNDSLIEGLKGKCQKGDTIATKNPAYFCDFKSQIAFNNYNSAICIYTGMQAEERIKEADISPRKDSKPQS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CDD88_RS26585, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 3: CDD88_RS26590 (Region 1)
Locus: CDD88_RS26590ORF Start: 28671
ORF Stop: 29081
Strand: Forward
Protein Sequence: MPSQLPLDPKLPANFDDTPNSERSKEQLDEWWDHPYGITKPDGSFTDRCLNGGARDRSSVLGKVRTYEAACVLAHDAQAKWVKTRLKPIFMYSNEPPFRLVVQSQRPDYEESIIGEFNTIDEINLFLLKQHPTRTT
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CDD88_RS26590, Lxr, phage(gi46401722), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 3.11e-53
Locus 4: CDD88_RS26595 (Region 1)
Locus: CDD88_RS26595ORF Start: 29266
ORF Stop: 29625
Strand: Backward
Protein Sequence: MFNSLSDYLQQQRDREEALKRKLSQLKPTVRNGEAGEIIAALIDLGSVGGDFKKTTYDYIYEYFASARCIDVLVVMLFLNMKHPLSDGAIKKAYARQSDSEDSRSAYISLIVDTIDKRR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CDD88_RS26595, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 5: CDD88_RS26600 (Region 1)
Locus: CDD88_RS26600ORF Start: 29856
ORF Stop: 30299
Strand: Forward
Protein Sequence: MSTIPQLAKLGFSSDVVPVINTPAPNMTRGFERFHISYNSSSAGYGCDTTALVLDGRVFFVLNGDHACDMTKAAAARGIDGCIDVFIDRIESASRHSEHKMAIGLTNDEFGLMPTALAVIGEENILRLLSAVTGNVQDFSAYGINQD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CDD88_RS26600, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 6: CDD88_RS26605 (Region 1)
Locus: CDD88_RS26605ORF Start: 30341
ORF Stop: 30544
Strand: Forward
Protein Sequence: MKLEDLTGDDRTLVVVALQALFRERSNSYHAACTACQLAGEKPPAENLFCVEESISAIRRMGALPQR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CDD88_RS26605, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 7: CDD88_RS26610 (Region 1)
Locus: CDD88_RS26610ORF Start: 30553
ORF Stop: 30813
Strand: Forward
Protein Sequence: MKSTNENENRRGLLISAGQLLFGERWQTELARALGLSDGRRIRQWLSGDRPIPVGIWDDLRELLEDRSSKMELIVKQIQASKKDKM
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CDD88_RS26610, hypothetical protein, phage(gi971749619), PHAGE_Mannhe_vB_MhS_535AP2_NC_028853
Homolog/Ortholog E-Value: 1.11e-14
Locus 8: CDD88_RS26615 (Region 1)
Locus: CDD88_RS26615ORF Start: 30846
ORF Stop: 31280
Strand: Forward
Protein Sequence: MTQQFSPPYEVVEMSRRIFENLISSTLKTSDTTGTCMYGSILVSMLLEKFSGVRTRIAGGDGVDDGGILTAAGMKGHYWVVANVNGMLFVVDITADQFGMDKIVYKGLKDAPEYIEGHQITIDEHVHETLHQIIGSYSSEYNQL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CDD88_RS26615, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: CDD88_RS26620 (Region 1)
Locus: CDD88_RS26620ORF Start: 31369
ORF Stop: 31698
Strand: Forward
Protein Sequence: MDKRYELADKHGMSHEFIDWFFDKKKDGSGDLWFVMMSAMWEGYKARDTHSTKAFAYHQEQQNFEAWWEQNNEGGPLSGWENLRAKDGYNDEDIDKQWEAWLGRARYTG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CDD88_RS26620, hypothetical protein, phage(gi100049), PHAGE_Entero_Tyrion_NC_031077
Homolog/Ortholog E-Value: 8.12e-17
Locus 10: CDD88_RS26625 (Region 1)
Locus: CDD88_RS26625ORF Start: 31770
ORF Stop: 33185
Strand: Forward
Protein Sequence: MSEFDSLAEELVEEARNEEARQQQRDLSLIGKVLEIYDQKFVAELLRKLGNSDWTRETLNRWINGKCGPRSLTVTEASLLERLLPQPPANHPNYAFRFIDLFAGIGGIRHGFEAIGGQCVFTSEWNSYSVKTYKANWYCDPEAHIFNSDIRDVTLSHKEDVSEEDAYAHIDKSIPDHDVLLAGFPCQPFSLAGVSKKNSLGRKHGFECDTQGTLFFDVARIIMAKKPAIFVLENVKNLKSHDKGKTFRVIMDTLNELGYDVADAEATGADDPKVIDGKHFIPQHRERIVLVGFRRDLNLSQGFSLADISSLFPERKVLFRELLDSDVDDKYTLTPKLWDYLYKYAKKHQEKGNGFGFGLVKPDDDKAISRTISARYHKDGSESLVDRGWDSELGEKNFNDPDNMARRPRRLTPRECARLMGFEQPGKVTFRIPVSDTQAYRQFGNSVIVPVFDAVAKLLESRIIEAVKSRK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CDD88_RS26625, gp47, phage(gi327198092), PHAGE_Burkho_KL3_NC_015266
Homolog/Ortholog E-Value: 3.87e-130
Locus 11: CDD88_RS26630 (Region 1)
Locus: CDD88_RS26630ORF Start: 33275
ORF Stop: 34477
Strand: Backward
Protein Sequence: MSLLAEWLQTKCSANVWVFVKRLSANDTGATKSHQSGLYMPGAVIDELFPSLRDTQLRNPEALFSVHVSSHPDCPDLNDVRAIYYNNKFFGGTRDEKRLTGFGKQNPLQNPENTGALALLAFDHMPGTSSSYCDVWVCKDLSEEEIPEPIIGEVIPGATIFGPGDKIIGGFVTETPPGRTKYKLPPEWNHYFPSGREIIGFAACHYDKKTSDPDTQLTRRRKIEFEIFLAVEELHVLGQIAKGFATVNDFITLANSVSNRRKSRAGKSLELHLESLFTEHGATSFETQATTEGKKKPDFIFPSGAAYRDPDYPAERLRMLGVKTTCKDRWRQVLNEANRIDTVHLFTLQQGVSVAQFREMQAEGIRLVVPEGLHKAFPEEIRGELMSLSAFINEIKELYS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CDD88_RS26630, gp45, phage(gi327198090), PHAGE_Burkho_KL3_NC_015266
Homolog/Ortholog E-Value: 5.33e-39
Locus 12: CDD88_RS26635 (Region 1)
Locus: CDD88_RS26635ORF Start: 35057
ORF Stop: 35305
Strand: Forward
Protein Sequence: MIIRDKITAELNYHASVEGETGNIKMCRIILGAVNNMVVYNTMVKVKKAPGSDSKTDDEQYFHYVKPWVVPFIEKMHAVNDK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CDD88_RS26635, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 13: CDD88_RS26640 (Region 1)
Locus: CDD88_RS26640ORF Start: 35333
ORF Stop: 35650
Strand: Forward
Protein Sequence: MALLISADDRITRLCPLDMEGSRDNDGAFSLADMQQLVGGYIEAVKLNPVIVHENIRYCWLIINEEGKLLSLPVNKNATLLVKSVISPGDYIVGNALMLEETEFQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CDD88_RS26640, hypothetical protein, phage(gi508177861), PHAGE_Mycoba_PegLeg_NC_021299
Homolog/Ortholog E-Value: 5.74e-05
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download