Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1241060254 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1241060254.PHASTER.zip
gi|00000000|ref|NTCW01000077.1| Klebsiella pneumoniae strain B16 plasmid pB16 P26, whole genome 65332, gc%: 51.83%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 7.9Kb | incomplete | 10 | 15 | 53361-61321 info_outline | PHAGE_Entero_N15_NC_001901(2) | 54.18% | Show info_outline |
Region DNA
>1 53361-61321 ATGTTGATGCAGCATATCGGTGTCGGCTATTTTGGGTATTACCGAGCAACTGCTTATGCGATGAAACACT CTCTTATGCCCGAGATTGCGAAGTTAAGAATGAAGGCTCTGAACTTCTGGGATAAGCACGGGATCCGTGC CGCAGCTGATGCTTTTGACGTATCAACGCGAACACTCTACTGGTGGCGCCGGTTACTGCGCACCGGTGGT CCAGAAGCACTAATTCCAAGAAGCAAAGCCCCTCTGGTTCGCCGTTCAAGGCACTGGCATCCTGATGTAC TCAAGGAGATCAGGCGTCTGAGAACTGAGTTACCCAATCTCGGCAAAGAGCAGATTTTTGTCAGGCTGAA ACCATGGTGTGAAGCGCGGCATTTTACCTGTCCCAGCACGTCAACCATTGGAAGAATCATTGCTGGTGCT CACGATAAAATGCGGATGATCCCCGTACGCCTCAGCGCCAGGGGCAAAGCCCGGTTGATAAAAAAACGCT CAGTGAAGCCCAGAAGACCAAAACAATACCGCCCGGTAAAAACAGGCGAACTCATAGGGATGGACGCGAT TGAACTCAGGATGGGGGACCTACGCCGCTATATCATTACCATGATCGACGAGCACAGCGACTATGCGCTG GCCCTGGCGGTCCCTTCACTCAACAGCGATATTACCAGCCATTTCTTCAGCAAGGCCACAAAGCTCTTTC CTGTCGCTATCAGACAAGTTGTCACTGACAACGGTAAGGAGTTCCTCGGTAACTTTGATAAAACGCTACA GGAAGCCTCGATTAAACACATCTGGACCTATCCGTACACACCGAAAATGAATGCGACCTGTGAGCGATTT AACCGGACACTTAGAGAACAATTTATTGAATTCAATGAATTGTTGCTTTTTGAGGACCTGAATTTGTTTA ATCAAAGAATGGCTGAATATCTGGTGCTGTATAACAGCAAAAGGCCACATAAATCACTCGAACTGATGAC GCCAGTGGACTATATTTTACGTGAGAGTAAAAATTGCAATATGTGGTGGACCCATACACCTCCTTGCAAA TTGCACGGTAAGAGGCCATACTGGTGTTGACTAGACATTCAGTGGGCCTCGTGGGTTAATGAAAATTAAC TACGGGGCTTTCTGCTTTCTGCCACACAACACGGTAACAAACCACCTTCACGTCATGAGGCAAAAAGCCT CAAGCGCCACGTCGATTATACCGGGCCGGTGCTATTTCTTACCAGGTATATCCACGCTTTATGCTGCTTA GCGCTTTAAATATCTAATGTATACCCATCCCGCGATCAAGACGCCCGTGCCCAGCGCAAGATTAGGCAAA ATAACATCGTTTGCACTTGCATATATGGTATTAGGATCATGTTGCCCCCAGAATGCCAGCTTGTACCCGA TGCCCCAGACAAAGAATATAATCCCGGCAATCAGAACGCCGAATTTTATTACGCCGAGCAGGATTCCATC TAACCAGTCAGGCGGATCACGCCATGTGATGACCGCAGCTATTAGTGTGCAGATGATTTGGCCTGCATAA TAACAAGGGGAACCATACCATTCCGGAGCAACATGCTTCACGATAAAATAGAACAGCACGTTCATTAAGA TAACGAGCAACCAGTACCTCATAGTTCTGCTTTCCTTGTATTTGGCCATCTGAGTTGTCAGACAGCATTG TACTTATTCATCGGGCGGACTTGCCATTGAAATACTCCGGACGCGCAGCCAGTTCACGCTCGATTAACTC GTCGGCAAACAAAGGGGCAACACGATTAATACGTGCCTGCATGTTGCGCCTTCTCACCGCTGCTTTCCGT TCATCGCTCCAGCGTTGGATCTGTTTCTGGCCGAGAAAATCCACGCATACAGCGTAACCTGAGCCAGCCA CCCAGCGTGACATCACCTCTTCAGGTGCCGCCTGCCCAGCCTCCACGACAACGGAAATCAGTTCCCGTGG ACCTGGGCAGGGCCTGTGCGGCAGTTTCCAGCGCAGAGAATAGCGCCACTTCATACACCACTCCGATCAG CCAGCTTATTTGGCACCTGCCAGCGTTCAGCAACACGAATATGCTCAGGTGTTTCCCGGACAATAAACGG AATTTCGTACATCACTGCATACAGCGGCTCACCGCTGATGCGAAGCCAGTCAAGTTCCTTCAGCGATGCG AATCGCGACTGCCAGCGCCAGAACGGTGCTGCAAGCTCTGCCGCGTCAAACTCGTCGCTCCACCGGGTGT ACCAGGTGCAGACGGTTTCCGGTGACTGAAAATTCAGTTCTGTGACAGCCTGTCCCAGCAGGTTCTGACG CAGTAACCAGGACTGCTCGACCTGACGGGCTTCACGGCGCATTTTTCGGGTGAAGGCAAAGTCCTGACGT TTTAGCCTGCGTACTGTTCGGGTATGAAGGACTTCCGGAAAATTTTCAGCCTGCACATCCATTGTCAGCG GCAGCGGACAGTATTCCCCGTGGCTGGAGATAAGCATATCCAGCGCCTCTTCTACCTGTTTCAGGCTGGA AAGGCGGTCTTTTGGATCACGGTGAATGCCAGGAATACGGCGGGCAACGTCACTGTTAATCCGGCTACAG CCTGTCAGCAGGCGCAGGAATGTCCGGACGTGTGGCATCGATGGCAGACGTGCGCCGCGCTGGCGAGCCT CTTCCACCGTCATGATGGCCTGCAGCGCTGCCTGACGGGCTGGTTTCAGGGATACAAGAGCACTGGATGA CGGGATCATTGTGCGCCCTCCTGTGACAGCGTGCTGATGATGCTGGCAAACGAGTAGCCACCGGCGTCAA GACACTCGATGAGATCCAGAGTATGGGTGATGAGTTCAGGGTTGAATGCATCCATCACGCGAACGACAGA GAACGGCTGACCGTCACGGGTAACAAAGACCACTATCCAGCGAGGATTCAGCTCCCCCGAACTGCATACC GCCACATCAAAGTGACCATGAGGGGGGGTAAAACGGATCTGGACAGGAAAGAAGCCGCCAAATTCGCACC GGTATTCGGCATTCACGGACCAGCCGGACGGTGAGGTCAGATCGCGCATGACAGCGTGACTCAGCTCCCG GCGAAAGTCTTCACCGGCGGCGCGGTAGTCTTCCAGCTCATCAGAAGACATGGTTTTCAGGACATCCAGA GTCAGTAACGTTTTCATTTTCAGTCTCCTTATCGCCGCCCCGCAGGGCGGCGTCTCCGTTATCAGGCGGC GCAGGCCGGGTTGTTATGGTCGGTGACGGTCGCCGGCATCAACGTCGGTATCGTTCTGACTTGTTGCCAG ACTGAGTTCAGACTTTGCGGCAAGCTGTTTCTGGTTGTCAGCACTGGTCATCCATTCCGGAACCCAACGG ATTTTTGAGAGGAAGTGCTCTGCATGTTCAGCGGCATCCTTTTTCTTCATCTTCGCGGCGTCCTGTGCTG CGCCAGCCAGTCCGGTCTGAGAGAGTGCCTGTACAATGTGTGGCAGCTTCATGTGCGAGAAAAGGTTATC AGCCGTCGGTTTCCACCAGTCACGAAGGTCAAACTGAATGGCGTTTTCCACCCCATCCAGCGAACTCTGG TGTTTACGACCAAATTCATCCTTGCCCTGTACACCATCTATGGAACAGGCGGTGCAGAAAGCCATCAGTG CCATCAGGGTTGCGCCATCGAGCGTAAAGAAGGTGGTCATATCCTTTCGCCAGTTTTCCGGCAGCAGGGC TTCAAGACGTTCTTTTTCTGACTGGATGGCCTGAAACGCAACGCTGTTTTCACCGTCAGGTGCTTCACGG GTCAGCGCGTAATGCGACACACTCACGCTAATGCAGAACGGCTCTTTGACGGACGTTGTGGTATGGAAAA CCGAGTTACACATTTTCCAGACCATCAGCGCGACGGCTTTCTGCGGCTGCTGCAACAGGGCCGCCTGAAC CGCCAGTGTGCGTTCAGAAGAAAGGCGGGTCAGCAACGGGACACTGACGGCGTCCAGCGGATCGACTTTT TCAGGTGCCTGATCGGTGGATGCATCCTTCTCCTCCATTTTTTCATCGGCGCACAGCACCACACCGCGCT GTACTTTCACCTCCTGGCCAGTCCAGGAAACCACCACTCCGGCAGATTGCTTCATTTCATCCGTCCATGC CCGGTGTTTTGCCCGGTGCGCGATGGTCTGCTGTTCTTCCCAGACGGCTTCCAGAGCCCCGGCCACGACG TCATCATTCACGCTGGGGTTCTCGTCTTCATACTTAGCTTCCAGAGCTTCCAACTCTGCAAGACGTTCTG ATTCGGCTTCGGTATATTCCACAGGCGGGACAGCATGCAGGCGCCAGATTTTAGTGTCCTTCCCGTAGTG TGAAATCGGGTCAAGACGACCATCACACCATGACCAGCCTTCCGCTTCGCGGAGGTGCTCCGCGATGTTC TGCAGTTTTTCCAGCAGGGCGGTATCGAGCGATGCACTTTTGACATAGCCGCGGTTTTCGCTGCTGAAGA GATCAACCCGGATTTCATCCGGACTGAATGCGGCCTCTCCCACAAAGCGGAATTTGTCGCCGTTTGTGGA AACCTCTTCTGAGGTAATGAGGTTACGGATCGAGGAAACTGATACTTCATTATTCCAGGACCGTTTGCGG GCGGATTCCAGCACTTCCACCTGGCGTTTCTGATCGCTTTCGAGCGCCAGTGCCTGGCAGTGTTCGGTGG TGATTTCATCCTTCGCCAGCGCCGCCAGAATTTCGGGAGCCAGTTCGGTCAGTTTCAACATGCGCTGAAC ATGACGCGTACCGAACCCCAGCAAATCGCCAATCTGCGCGGGGGTTTTCCCCTGCTCTGCCAGTGTGCGG AACCCGGCGATCTGTTCAGACGGATGCATTGCCATCTGCTGTTCGTTTTCTGCCATTGATGCCGCAACAG CCAGTTCATCAGGTACCTTTTTCACCATCACCTGATATCCGGCATCGATACGGTTTTCACTCTGCAGGAG CTGCAGCGCTTTCAGGCGACGACCACCGGCAGCCACACCACAGCGACCATCCGGGAGGTTATGCACGACC AGATTCTGCAACAGGCCAATGGCTTCAATGGAATCAGCCATTGAACAGACTTTCTCCGCCGGATAGGGAA TGGTCCTGACGTTCAGGGGAGACTTCACCAGTGCAGACACCGGGACATACTCGACCTGTGCGGCATCGAG AGCCACTTTAAGCGCCTCAGCCTCGGCAGACTTAAGTGTTTTTTTGCTGGTTTTCGGTGCAGTTTTTACC TTAGACTCTGTTGCAGACATAATTGATACCTCTTAGCTATTGATGAATGTCTGCCGGACAGCCCACCTGT CCGGCCTTCTTCTTACTGCTTACTTCGTTTTGCGTACTCCGTAGTCCCGGATGTAGCGGTTCATTATGTC CTCGCCGCCCGGTTCAAAATTCCATACGCGCCAGATCATGCTGCCGTCATCCTTATGACGGACGACAAGG CGAAAATGGGTCCCCTGGTCATCTTCAATCGCCACATTCTGATACTGCGCTGCGACAACCTGAGCCTGCT CGCGGGTAAACGTGCCATCCGGCAGGGATACAAGCGGGGACAAAACGTTATGGTCCATGTGTTTCTCCTT TTCTGCCCCGCCTGAACGGGGCGTCTTCATCGTGGTTTAAAAGGGCGCGTCATCATCCATTGGTGGGAAA TCATTCGGGAGAGGCTGAGGCGGTTGCTGAGACGGGGCGGCATCCTGACGGCCTTTCTTACCGCCCTTCG CTTTCGGGGATTTAGCTGCGGCCTGAGCAGGTTGTGCCGGGGTGGCAGGATTCTGCGGCTGCGCGGCGCT CTCAGGCACTCCGGATTCACGGCGGCCGCCGAGCATCTGCAGGGTGCCGTTCTGCCCGACCAGCACCTCG GTGACGTAGCGCGTGACTCCGGCATCGTCCTGCCAGTTGCGGGTGCGCAGTTGGCCCTCGATGTAGGCCT GTGCGCCTTTACGCAGGTATTCGCCCGCCACTTCCGCGAGCTTGCCGAACATGACAACACGGTGCCACTC GGTGTTTTCGCGCATCTCTCCCGTCTGCTTGTCACGCCATGTTTCAGACGTGGCCAGCGTCAGATTGGCC ACTGCGCCCCCGTTGGGCATGTAACGCACTTCCGGGTCCTGTCCCAGATGTCCAACCAGAATGACTTTGT TAACGCCACGTGCTGCCATGATGAATCTCCTTAATCCGTTGTTTTGCCTTTTAAAACCATCACCCGTTGA GTTGCCGGGGCCGCGGTTTTAACTTTGTGCGGGGACCTGCTGAACCTGCCCCCTGGATAAAACCTTCACC CGTTTGAGAGCCGTTCGCCGCAAGGGCGTAAACGAGCACGGGCGACGGCAGCTGTCCAGGGCGCGGTTTA CCGCGTGCCATTTACCCTGGACGGATGATGGCGACTGTGGTTGTCTCAGCCCAGGCGAATGGACTCAAAC GGGTGATACGGCACCAGGGGAAAGGAGCAGGCACCCGCCGCAACGACGAAGAGCGCGGGCGCGAAACGGC GTTGCCCCGCAGAGTGCCGGCAGTCCTTCGCCGGCACGGTGAAAGCGGCGCGGCCGGAACGGCCGCAGCA AGCGCTGCCGTTGACTTTGACCTCAGACATCAGACACTAGCCGTCAGGCCCGAAACCGCGTAGCGGGTTC GGCGGAGCTTACCGCGTCTTTTCGCGGTTAGCGGAGTGTGGCTCGACGACCGGACAGCGCAGCTGGCCGG GAGCCGAAGGTGTCCAGTGTGGGTATGCTTTTAAAGCCTTTAAGGTTTAAAAAGAGGCATCACAGCAGGG AGAAGAAGAGGAAGCAGGCAGACAGCAGGCAGCAAACAGGGAAGACGCGGAAAGGAAATGCGGGCGGCGC GTCAGCGCGGCCAGGTTTTCCCGGCGCCGCAGGCGCGCGGTCTTTCGAGGCGCGGCCAGACGGGGACCGA TGCCCCCTTCGCCTGCTCTGTTCCCGAATCAGTCAACAAACATCGAGACCGGGATTTGAAATCGATTTGC CAGCGCCCGCATGTGATCAAAGGTCAGACTGCGTTCACCACTGAGGAACCGGCTGACGAGCGATTTATTA CCTATCTCGTTTTCGAAATCGGACTGAGAAAGCCCGTATTGCTGCATAAGAACCCGCAGCAACGATACAC CGTTTTTGCCTGCTTCGAAGCGCGTATTAAATTCTTCAAATTCCACCGCGTTATCTTCCCAGGCATCGAT GCGGGCAGTCAGCATATCAACCAGCGGGCTGCCCGGATCATGTTCCAGAAGATATTCAACGAGTTTACGT GCCTCTTCGTAATCTTTGCGGGACGAACTGCCACCCAGCAGAGGGACAATACTCGCCAGGTCATTCACCG CTTTATTGGCATCGCTAATCATTCAAACCTGCTGAATTTTAAAGTTAACACCGCAGGCTCTGGCGTACCG AACCAGCGTCTGAATACTCATTCGCGAAGCGTTCTTCTCCATACGTGAGATAGTAGGCGCTTTGATGCCC ATACGTTCTGCAACCTGTGCCGACGTCAAACCCGCTTCTTTTCTCCATGTTGCTAAGGTTTCCCGAAGTA GCTCCGAGGCTTCTTCTGCCTCGAATGCCGCGCTGTACTCATGATCGTTCATTGCTTCGGTATGAACCTG GCTAAGGGTTTTATATTTCATTCTGCATTTCCTCCAGTCTGCGAAGTGCCTGATCTATTTCTGCCGGGGG CGTTTTTGGCGATTTTTTGATAAAGATCCGAAGTAGAAAAATACGTTCACCACTCTGATATACCCAGATT CCGCGGGCGATATCTGCCCCCATTGTACGTATTTCGAAAAGGCCGTTTCCAAGCGGCTTGGTATCTGGCT CGCGTAGCTGGCGAGGGTTTGCTTCCAGCTTCATGAGTAGCCTGGCCATTTTTGCACGAATGGCAGCAGG CAGAGCCGTAAACTCTTTTTCAGCCTCATCATGAAAGATGACTGTGAACAT
Region Details
| Region | 1 |
| Region Length | 7.9Kb |
| Completeness(score) | incomplete(10) |
| Specific Keyword | NA |
| Region Position | 53361-61321 |
| # tRNA | 0 |
| # Total Proteins | 15 |
| # Phage Hit Proteins | 6 |
| # Hypothetical Proteins | 4 |
| Phage + Hypothetical Protein % | 66.6% |
| # Bacterial Proteins | 5 |
| Attachment Site | no |
| # Phage Species | 6 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_N15_NC_001901(2) PHAGE_Klebsi_phiKO2_NC_005857(2) PHAGE_Shigel_Stx_NC_029120(2) PHAGE_Shigel_POCJ13_NC_025434(2) PHAGE_Spirop_SkV1_CR2_3x_NC_009987(1) PHAGE_Entero_P1_NC_005856(1) PHAGE_Spirop_1_C74_NC_003793(1) PHAGE_Gordon_Nyceirae_NC_031004(1) PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1) PHAGE_Gordon_Hedwig_NC_031099(1) PHAGE_Strept_phiARI0460_1_NC_031913(1) PHAGE_Rhodov_vB_RhkS_P1_NC_031059(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Vibrio_X29_NC_024369(1) PHAGE_Rhodob_RcapNL_NC_020489(1) PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 13.33% |
| GC % | 54.18% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NTCW01000077.1| Klebsiella pneumoniae strain B16 plasmid pB16 P26, whole genome 65332, gc%: 51.83%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 15 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 53361..54440 | PHAGE_Spirop_SkV1_CR2_3x_NC_009987: hypothetical protein; CLI87_29010; phage(gi160688404) | 1.08e-08 | Showinfo_outline |
| 2 | 54447..54557 | protein sok; CLI87_29015 | 0.0 | Showinfo_outline |
| 3 | complement(54618..54992) | hypothetical protein; CLI87_29020 | 0.0 | Showinfo_outline |
| 4 | complement(55048..55374) | PHAGE_Rhodob_RcapNL_NC_020489: hypothetical protein; CLI87_29025; phage(gi461475014) | 4.42e-17 | Showinfo_outline |
| 5 | complement(55371..56099) | plasmid SOS inhibition protein A; CLI87_29030 | 0.0 | Showinfo_outline |
| 6 | complement(56096..56527) | conjugation system SOS inhibitor PsiB; CLI87_29035 | 0.0 | Showinfo_outline |
| 7 | complement(56594..58630) | PHAGE_Gordon_Hedwig_NC_031099: RNA polymerase binding protein; CLI87_29040; phage(gi100054) | 5.44e-07 | Showinfo_outline |
| 8 | complement(58700..58948) | DUF905 domain-containing protein; CLI87_29045 | 0.0 | Showinfo_outline |
| 9 | complement(58997..59539) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; CLI87_29050; phage(gi100049) | 6.19e-64 | Showinfo_outline |
| 10 | 59772..59980 | hypothetical protein; CLI87_29055 | 0.0 | Showinfo_outline |
| 11 | 60099..60296 | hypothetical protein; CLI87_29060 | 0.0 | Showinfo_outline |
| 12 | 60208..60420 | hypothetical protein; CLI87_29065 | 0.0 | Showinfo_outline |
| 13 | complement(60319..60732) | transcriptional regulator; CLI87_29070 | 0.0 | Showinfo_outline |
| 14 | complement(60733..61011) | PHAGE_Entero_N15_NC_001901: gp48; CLI87_29075; phage(gi9630515) | 7.11e-14 | Showinfo_outline |
| 15 | complement(61001..61321) | PHAGE_Klebsi_phiKO2_NC_005857: Gp49; CLI87_29080; phage(gi46402135) | 1.05e-24 | Showinfo_outline |
Sequence
>53361..54440
[Klebsiellapneumoniae]
Sequence
>54447..54557
[Klebsiellapneumoniae]
Sequence
>complement(54618..54992)
[Klebsiellapneumoniae]
Sequence
>complement(55048..55374)
[Klebsiellapneumoniae]
Sequence
>complement(55371..56099)
[Klebsiellapneumoniae]
Sequence
>complement(56096..56527)
[Klebsiellapneumoniae]
Sequence
>complement(56594..58630)
[Klebsiellapneumoniae]
Sequence
>complement(58700..58948)
[Klebsiellapneumoniae]
Sequence
>complement(58997..59539)
[Klebsiellapneumoniae]
Sequence
>59772..59980
[Klebsiellapneumoniae]
Sequence
>60099..60296
[Klebsiellapneumoniae]
Sequence
>60208..60420
[Klebsiellapneumoniae]
Sequence
>complement(60319..60732)
[Klebsiellapneumoniae]
Sequence
>complement(60733..61011)
[Klebsiellapneumoniae]
Sequence
>complement(61001..61321)
[Klebsiellapneumoniae]
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 65332 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Locus 1: CLI87_29010 (Region 1)
Locus: CLI87_29010ORF Start: 53361
ORF Stop: 54440
Strand: Forward
Protein Sequence: MLMQHIGVGYFGYYRATAYAMKHSLMPEIAKLRMKALNFWDKHGIRAAADAFDVSTRTLYWWRRLLRTGGPEALIPRSKAPLVRRSRHWHPDVLKEIRRLRTELPNLGKEQIFVRLKPWCEARHFTCPSTSTIGRIIAGAHDKMRMIPVRLSARGKARLIKKRSVKPRRPKQYRPVKTGELIGMDAIELRMGDLRRYIITMIDEHSDYALALAVPSLNSDITSHFFSKATKLFPVAIRQVVTDNGKEFLGNFDKTLQEASIKHIWTYPYTPKMNATCERFNRTLREQFIEFNELLLFEDLNLFNQRMAEYLVLYNSKRPHKSLELMTPVDYILRESKNCNMWWTHTPPCKLHGKRPYWC
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CLI87_29010, hypothetical protein, phage(gi160688404), PHAGE_Spirop_SkV1_CR2_3x_NC_009987
Homolog/Ortholog E-Value: 1.08e-08
Locus 2: CLI87_29015 (Region 1)
Locus: CLI87_29015ORF Start: 54447
ORF Stop: 54557
Strand: Forward
Protein Sequence: IQWASWVNENLRGFLLSATQHGNKPPSRHEAKSLKR
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CLI87_29015, protein sok
Homolog/Ortholog E-Value: N/A
Locus 3: CLI87_29020 (Region 1)
Locus: CLI87_29020ORF Start: 54618
ORF Stop: 54992
Strand: Backward
Protein Sequence: MRYWLLVILMNVLFYFIVKHVAPEWYGSPCYYAGQIICTLIAAVITWRDPPDWLDGILLGVIKFGVLIAGIIFFVWGIGYKLAFWGQHDPNTIYASANDVILPNLALGTGVLIAGWVYIRYLKR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CLI87_29020, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: CLI87_29025 (Region 1)
Locus: CLI87_29025ORF Start: 55048
ORF Stop: 55374
Strand: Backward
Protein Sequence: MKWRYSLRWKLPHRPCPGPRELISVVVEAGQAAPEEVMSRWVAGSGYAVCVDFLGQKQIQRWSDERKAAVRRRNMQARINRVAPLFADELIERELAARPEYFNGKSAR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CLI87_29025, hypothetical protein, phage(gi461475014), PHAGE_Rhodob_RcapNL_NC_020489
Homolog/Ortholog E-Value: 4.42e-17
Locus 5: CLI87_29030 (Region 1)
Locus: CLI87_29030ORF Start: 55371
ORF Stop: 56099
Strand: Backward
Protein Sequence: MIPSSSALVSLKPARQAALQAIMTVEEARQRGARLPSMPHVRTFLRLLTGCSRINSDVARRIPGIHRDPKDRLSSLKQVEEALDMLISSHGEYCPLPLTMDVQAENFPEVLHTRTVRRLKRQDFAFTRKMRREARQVEQSWLLRQNLLGQAVTELNFQSPETVCTWYTRWSDEFDAAELAAPFWRWQSRFASLKELDWLRISGEPLYAVMYEIPFIVRETPEHIRVAERWQVPNKLADRSGV
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CLI87_29030, plasmid SOS inhibition protein A
Homolog/Ortholog E-Value: N/A
Locus 6: CLI87_29035 (Region 1)
Locus: CLI87_29035ORF Start: 56096
ORF Stop: 56527
Strand: Backward
Protein Sequence: MKTLLTLDVLKTMSSDELEDYRAAGEDFRRELSHAVMRDLTSPSGWSVNAEYRCEFGGFFPVQIRFTPPHGHFDVAVCSSGELNPRWIVVFVTRDGQPFSVVRVMDAFNPELITHTLDLIECLDAGGYSFASIISTLSQEGAQ
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CLI87_29035, conjugation system SOS inhibitor PsiB
Homolog/Ortholog E-Value: N/A
Locus 7: CLI87_29040 (Region 1)
Locus: CLI87_29040ORF Start: 56594
ORF Stop: 58630
Strand: Backward
Protein Sequence: MSATESKVKTAPKTSKKTLKSAEAEALKVALDAAQVEYVPVSALVKSPLNVRTIPYPAEKVCSMADSIEAIGLLQNLVVHNLPDGRCGVAAGGRRLKALQLLQSENRIDAGYQVMVKKVPDELAVAASMAENEQQMAMHPSEQIAGFRTLAEQGKTPAQIGDLLGFGTRHVQRMLKLTELAPEILAALAKDEITTEHCQALALESDQKRQVEVLESARKRSWNNEVSVSSIRNLITSEEVSTNGDKFRFVGEAAFSPDEIRVDLFSSENRGYVKSASLDTALLEKLQNIAEHLREAEGWSWCDGRLDPISHYGKDTKIWRLHAVPPVEYTEAESERLAELEALEAKYEDENPSVNDDVVAGALEAVWEEQQTIAHRAKHRAWTDEMKQSAGVVVSWTGQEVKVQRGVVLCADEKMEEKDASTDQAPEKVDPLDAVSVPLLTRLSSERTLAVQAALLQQPQKAVALMVWKMCNSVFHTTTSVKEPFCISVSVSHYALTREAPDGENSVAFQAIQSEKERLEALLPENWRKDMTTFFTLDGATLMALMAFCTACSIDGVQGKDEFGRKHQSSLDGVENAIQFDLRDWWKPTADNLFSHMKLPHIVQALSQTGLAGAAQDAAKMKKKDAAEHAEHFLSKIRWVPEWMTSADNQKQLAAKSELSLATSQNDTDVDAGDRHRP
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CLI87_29040, RNA polymerase binding protein, phage(gi100054), PHAGE_Gordon_Hedwig_NC_031099
Homolog/Ortholog E-Value: 5.44e-07
Locus 8: CLI87_29045 (Region 1)
Locus: CLI87_29045ORF Start: 58700
ORF Stop: 58948
Strand: Backward
Protein Sequence: MDHNVLSPLVSLPDGTFTREQAQVVAAQYQNVAIEDDQGTHFRLVVRHKDDGSMIWRVWNFEPGGEDIMNRYIRDYGVRKTK
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CLI87_29045, DUF905 domain-containing protein
Homolog/Ortholog E-Value: N/A
Locus 9: CLI87_29050 (Region 1)
Locus: CLI87_29050ORF Start: 58997
ORF Stop: 59539
Strand: Backward
Protein Sequence: MAARGVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTEWHRVVMFGKLAEVAGEYLRKGAQAYIEGQLRTRNWQDDAGVTRYVTEVLVGQNGTLQMLGGRRESGVPESAAQPQNPATPAQPAQAAAKSPKAKGGKKGRQDAAPSQQPPQPLPNDFPPMDDDAPF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CLI87_29050, hypothetical protein, phage(gi100049), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 6.19e-64
Locus 10: CLI87_29055 (Region 1)
Locus: CLI87_29055ORF Start: 59772
ORF Stop: 59980
Strand: Forward
Protein Sequence: CLSPGEWTQTGDTAPGERSRHPPQRRRARARNGVAPQSAGSPSPARKRRGRNGRSKRCRLPQTSDTAG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CLI87_29055, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 11: CLI87_29060 (Region 1)
Locus: CLI87_29060ORF Start: 60099
ORF Stop: 60296
Strand: Forward
Protein Sequence: VGMLLKPLRFKKRHHSREKKRKQADSRQQTGKTRKGNAGGASARPGFPGAAGARSFEARPDGDRCP
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CLI87_29060, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 12: CLI87_29065 (Region 1)
Locus: CLI87_29065ORF Start: 60208
ORF Stop: 60420
Strand: Forward
Protein Sequence: MRAARQRGQVFPAPQARGLSRRGQTGTDAPFACSVPESVNKHRDRDLKSICQRPHVIKGQTAFTTEEPADE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CLI87_29065, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 13: CLI87_29070 (Region 1)
Locus: CLI87_29070ORF Start: 60319
ORF Stop: 60732
Strand: Backward
Protein Sequence: MISDANKAVNDLASIVPLLGGSSSRKDYEEARKLVEYLLEHDPGSPLVDMLTARIDAWEDNAVEFEEFNTRFEAGKNGVSLLRVLMQQYGLSQSDFENEIGNKSLVSRFLSGERSLTFDHMRALANRFQIPVSMFVD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CLI87_29070, transcriptional regulator
Homolog/Ortholog E-Value: N/A
Locus 14: CLI87_29075 (Region 1)
Locus: CLI87_29075ORF Start: 60733
ORF Stop: 61011
Strand: Backward
Protein Sequence: MKYKTLSQVHTEAMNDHEYSAAFEAEEASELLRETLATWRKEAGLTSAQVAERMGIKAPTISRMEKNASRMSIQTLVRYARACGVNFKIQQV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CLI87_29075, gp48, phage(gi9630515), PHAGE_Entero_N15_NC_001901
Homolog/Ortholog E-Value: 7.11e-14
Locus 15: CLI87_29080 (Region 1)
Locus: CLI87_29080ORF Start: 61001
ORF Stop: 61321
Strand: Backward
Protein Sequence: MFTVIFHDEAEKEFTALPAAIRAKMARLLMKLEANPRQLREPDTKPLGNGLFEIRTMGADIARGIWVYQSGERIFLLRIFIKKSPKTPPAEIDQALRRLEEMQNEI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CLI87_29080, Gp49, phage(gi46402135), PHAGE_Klebsi_phiKO2_NC_005857
Homolog/Ortholog E-Value: 1.05e-24
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download