Submission Results
Sequence Name: Not Available
GenBank Accession Number: ACOS01000025.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: ACOS01000025.1.PHASTER.zip
gi|00000000|ref|ACOS01000025.1| Enterococcus faecium E1039 contig00025, whole genome shotgun 28262, gc%: 36.54%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 12.9Kb | incomplete | 20 | 25 | 15351-28262 info_outline | PHAGE_Entero_phiEf11_NC_013696(3) | 36.11% | Show info_outline |
Region DNA
>1 15351-28262 GTGTTAAAACCATTAGGTGATCGCGTCATTATCGAAGTCGCAAAAGAAGAAGAAAAAACT GTCGGAGGAATCGTTTTAGCTTCTGCTGCTAAAGAGAAACCCCAAACTGGGACAGTTGTT GCAGTCGGTGAAGGCCGTTTGTTAGAAAACGGTGAAAAAGTTCCTGCCGCTGTAAAAGCA GGCGACCAAGTTATGTTCGAAAAATACGCCGGTACAGAAATAAAATACGAAGGAAAAGAA TATCTGATCGTCGCAGGAAAAGATATCATGGCGATTGTTGAGTAAATTTTGAAGATAAAA AAATAATCAAAAATAATCAATGAGGTGAATCAATCATGGCAAAAGAATTGAAATTTGCAG AAGACGCACGCGCAGCTATGTTACGCGGGGTAGATAAATTAGCAGATACAGTGAAAGTAA CATTAGGACCTAAAGGCCGAAATGTCGTACTAGAAAAATCTTACGGCTCTCCATTGATCA CAAATGATGGTGTGACGATCGCAAAAGAAATCGAATTAGAAGATCATTTTGAAAACATGG GTGCAAAACTTGTATCAGAAGTAGCATCAAAAACAAATGATATTGCAGGAGACGGTACAA CGACAGCAACTGTTCTGACACAAGCAATCGTTCGCGAAGGTTTAAAAAACGTAACTGCAG GTGCTAATCCTCTAGGCATTCGTCGCGGGATCGAATTGGCAACAAAAGCAGCAGTCGAAG AATTGCATAATATCTCAACTGTTGTTGATTCAAAAGAAGCCATTGCACAAGTAGCAGCTG TTTCTTCGGGTTCTGATAAAGTTGGACATTTGATTGCTGATGCAATGGAAAAAGTTGGAA ACGACGGTGTCATCACAATCGAAGAATCAAAAGGGATCGAAACAGAACTAGATGTTGTAG AAGGTATGCAGTTTGATCGTGGTTACTTATCACAATATATGGTAACAGATAACGACAAAA TGGAAGCTGTTCTAGAAAACCCATATATCTTGATCACAGACAAAAAAATCTCTAACATCC AAGATATTCTGCCATTGTTAGAACAAATCTTGCAACAATCACGTCCATTGTTAATTATTG CTGACGATGTAGATGGTGAAGCATTGCCAACTCTTGTATTGAACAAAATCCGTGGAACAT TCAACGTAGTAGCTGTAAAAGCTCCTGGTTTCGGCGATCGTCGTAAAGCAATGCTTGAAG ATATCGCTATTTTGACAGGTGGTACAGTAATTACTGACGATCTAGGTTTAGAATTGAAAG ATGCAACAATCGAAAACTTAGGAAATGCTTCTAAAGTTGTTGTAGATAAAGACAATACAA CGATCGTAGAAGGTTCTGGAGAAAAAGAAGCAATCGAAGCTCGTGTGCAATTGATCAAAA ACCAAATTGCTGAAACAACTTCTGATTTTGACCGCGAAAAATTACAAGAACGCTTAGCTA AATTAGCAGGTGGTGTAGCTGTTGTTAAAGTTGGTGCAGCTACTGAAACAGAATTGAAAG AATTAAAATTACGCATTGAAGATGCATTGAATGCTACACGTGCCGCAGTAGAAGAAGGAA TGGTCTCAGGTGGTGGTACAGCTCTAGTGAACGTTATCAGCAAAGTTTCTGCTGTAGAAG CAGAAGGAGATGTGGCAACAGGTATCAAGATCGTTGTTCGTGCTTTAGAAGAACCAATTC GTCAAATCGCTGAAAACGCTGGTTATGAAGGATCAGTGATTGTTGATAAATTGAAGAACG TGGAACTAGGCACTGGTTTCAATGCTGCTACTGGAGAATGGGTAAACATGGTTGAAGCAG GTATCGTAGACCCAACTAAAGTAACACGTTCTGCCTTGCAAAATGCCGCTTCCGTTTCTG CCTTGTTATTAACGACAGAAGCAGTCGTTGCAGATAAACCAGAACCAGCAGCGCCAGCAG CTCCTGCAATGGATCCATCAATGATGGGCGGTATGATGTAGTAATTAAGAAAGAACCCTA TTTTAACAGGGTTCTTTCTTCTTTTTTTGTTTTATTTTAAGCAAAAGGGGCAAAGAAGGG GCAAAAATATCAAAGGCTATTTAGTTTATCAATTACTTGTTGTTTGGCTCTTTTTGTTAC ATGGTTATAAATAGACAGAGTTGTGTTTGCATCAGAATGCCCTACACGCTCCATAATGGC TTTAAGAGGTACGCCTAATTCAGATAATAGTGAAACGTGGCTATGTCTGAATATATGTGA GGATAGACTTTTTTCTAATTCCAACTCTTCCTCTACTTTATGGAGTATAGCGTTAAATGA GTGCAGCGTAAGCGGAGTGCCACTTGTAGATATAAATATATATTGATCGGGATCTGTGGG TCTACCTGCAAGAATATTGTCAGCTATCACACTTTCAATCAATTCTTTTGCACGATTGGG TAATTGCACTTCACGTTGCGAATAAGTATTTTTTGGAGTTGTTTTTATAGCATTATCCAT TTTCACAGATGTGTAATCTAAGGTCCCATTAATGGAAATTTTCCCATCCTCATAGTCCTT CATTTGCAAAGCTAGCAATTCCCCATATCTCAAACCAGTTAAATATAGAAACTCAGCTAT TATGCCGTGTAGTTTTCTGCGAGGATTGGAGTATAGCTGTTTCAGTATTTGATCAATTTC TTCTTTCTCCAGATATTTTTTATTCATAGAAAGCCTTCTTTTTTCTTCTTCCACTTTTTT AGGATGGATTTTAACTGCTAGCGCAGGGTTTCTTTGAATGTATTTTCTATCGATTGCATA GTTTAGCATAACAGATAGAGTTGTTTTTGTTTGTTTTGTGTAGTTCAGTGAGAGGTCACC AAACGTATACATATCTTCAATTATCTTATTAATGAGTGTCTCATCAATGTTTCTAACGAT CGTATCATCGCTTATGTGCTTAGAAACATGTTTCATCATCATTGGAACCTTCAAATAGCT AGTACGTTTAACATGCTGCTTATAATATTCATACCATTCTTTATACAGCTCACCAAAAGT GATATCTGATTTATTGTAATCTTCGAGTGCTTCTTTAATTTTTTTATCTAGAATTTTCTG AGCTTTTTTCCACGCTTGTGGTGAATTACTTGTAAGCGTTGTAGATTTTTTCCGTGTTTT TTCTGTATAAGGATCTACATATCTTTCAATAAACTTGAATCGCCCATCTTTGGTTTGTTC AACCCACACTTTTAACATCTCCTATCATTTGCTATAATAGGCATAACAAATAGACCTATA TAGGTTTGTTTTCTAAAAGCACGCTCTTACTCTGGACGGTGGGGCGTGTTTTTTAGTGTG CTTCAAAATCTTTATTTAATATTCTATTTAAAATCACATTGAACTCTGTCGCGTCAAAAT CACGCAGTAATATAATTTTTCCGGATTCTCTATACAGGTGTGTTCCATCTGAGAAGGCCT TTATACCAACTATATTAGAAAGGTTAATAACTTTCATTCCATTCTCGTTAACAAAAATTA TTCTTTTATTAGTCAAAAATGGTACCCCAATAAATACATCGTTCCATTCTGTTACTTTGT TCGAATTATGTTTAATTGATCCCATTCTATAATTCAAGCCTTTAGCAATTCTAATATTAG AAGATAAGCCTGAATAATTAGTTCGAACCGTTCTAGTTTTCTGCTCTTGCCATTTGACTC TCTGTTTAGGCGTATAGTAACAAAATTCATTAGATTTTAGATTGACCCCATCAATTAATG CTGCTCTTTTGGATAAATCCTCTTTTTCAAGTTGCCTAATCATTCTATTTAGTTCTTCTT TTTGCTCTTTTTCTGCCAGTTCTTTTTCTTCTTTTTTTCTTTTTGCAATTGTTCCATCAA GGTATTCAACTGGTTTTAAACCCATAAAAATTAAAAAAATTCCAAGGGGTAAAAAAACAA GTGTGACAGGCAAAACAATGAATGACATTAGACAAGATAAAACTCCTATAATAAGTGCAA GATATTTGAGTATTGTCACAAAAAATTTTTTCAAAGATTTTCCTCCTTTGATATAATAGA TTTCCCAATCTTAAAAGAGGTCAGGATAGTCCGTGTTGCGGCACGAGCTTTTTTTAATGT ATTACTGAAAACGATTTCTTTAATAATTCTTGATGTATTCATACATATTGCCTTGCGTAA GAATATTTTTTCTTAAAATAGCATTGGCAGACAGCATAACAAGTGTATCTGAGCTTATTC TGAATAGAATAATATTCCATAAATTTTTCGAGATTAAACTGAGATTCATCAGTCAGTTCG TTCTCAATATAGATATTTAATAGAATTAGAATAGCTACTTTATCTGCTTCTGTCTCAAAT TTTGAGTGAAAAGTTGTAGAAGTATCGTACAAAACTGAAAATTCAAAATGAGAGGCGCTG AAATGTGCAAGTTCATGAGATAAATGAAAGGCTTCTGCAGTTTCACCGTATAGATTTTCA TTCAAAAAAATGATTCTGGGTTTTGGATAGTAGAAACCAGGCTCTTTCATTTCCATATAA ACTACTTTCAAATTGTATTCGCTCAACATTTCTTTCAATTTCAAATACATATAAACCATC ACTCCAACTATTTGTTTTCTTCTAAAGCTTTAGCAATTGCAATCGCTTTACGCATTGTCT CCTTAGATATTTCTTTTCCGTCAAAAGAGAATACAGTATCGTCTTCTGACAAATCCACAT GTTTAGGGGTCTCTTTTTCTTCTCTACCTAGAAGGTAGTCTACAGAGACATCGAAATAGT CAGCTACCTTTTGTAAATCTCTTGCTTTAGGTTCTGTTGTTTTCCATCGATAGAAAAGAT TTTCGCTAAATCCTAATTCTAAAGCGACTTCTTTCATGCTTTTATCTCTTTGGTTAGCTA ATGATTTTATCCTTTCAAACAGTGTCATAATAATGTTCTCCAATCCTAAACAAATAAAAG TATACAAAATGTAAATTATACTGTTGACATAAGTATAAGTTTGTATTATTATTTGTTTGT AAGTTAATTTGATAGAAAAAAGCAAACTAAAAACACACCTTATAGCATTAAGTTTGGCGA CCGATTGCATAATAAATGGTTTGTTGTAGGCTTATTTAACTATGTTTATATAGTATACGA TTGTATACTGTTAGTCAATAGTTTTAAACGTTTTTTCTATCATTTTAACTTACAAATATA TATGTAAGGGAAGTGAATAGATGTCAAACCTAGATAATGGACGTGCTGCAATTAAAAATT TTATGCGAGAAAACGGAGTAACTATGGAAGATTTAGCTACTGCATATGGATATACGCGTG TTCGAATGCAGCAAATTATTGATGGCCATTGGAGTGGGCCGAAAGCTAATAAAACTATCT TAGAAATCATTCGCGATTATCGAATTCGGTAGGAGGGGAAACAAAATGAAAGAACTAATC AAAGTAACAACAAACGAGAACAATGAGCAATTGGTAAGAGGTAGAGAGTTGCATGAATTT TTAGAAGTAAAGGACAATTACACAGATTGGTTTAAGCGGATGATAACTTATGGATTTGAT GAAAATGTTGATTTTATAGGTTTATCGGAAAAATCCGATAAACTTGGAGGACGCCCACGT ATTGATCACGCAATGAAACTCGATATGGCAAAAGAAATTTCAATGATTCAACGAACAGAG AAAGGTAAACAAGCTCGTCAATATTTTATTCAAGTAGAAAAAGAATATAAACAACAGTTA CTTGATACTTCGAATTTGAGTCCAGAACTTCAAATGTTTCAAGGAATATTCACTGCAGTA GCTAAACAAGAAATTGCTACAAAGCAATTGGAAGCGAAAATAGATAGCGTATCAGAAATT ATAGCGCTAAATACTCTCGATTGGCGTAAAAATGCAAACTCATTGATAAATCAAGTTGCT CGCGTGCAAGGTGGTGGCGGTGCCCATAGAACTGTCCGCAATGAAATTTATAAGGAAGTT GAACGACGAGCTGGAGCTAATCTTTCTCAACGTGTGACAAATAAACGCCGCAGAATGGCA GATGAAGGAGTTTGTAAATCAAAGCGTGACAAACTTAATCAGGTAGATGTGATAGCTGAT GATAAAAAACTAGTCGAAATCTATTTATCTGTAGTAAAAGATTACGCAATTAAACATCGA GTATGGAACGATAATTTTTAGGAGGGGTAATAAGTGAAAAAACCAACACTTTCAGAGTTG ATAGAAGCTGCTGAGAAGGCAGTAAAACCAGACGACTGGTACCGACAAAGTTTAATCTTG GAGAAGTTCCACGGCATGTCAAAAACTACTTTAGTTGAATACTGCAAGGAAATGGAAACA ATTCCTGAATTTTCAGAAGGAATTGTTCGTCCAGGACATTCAACCACATTTATTCATTAC CACACTTTTATTTGGTTTTTAAAATGGAAAGACGCAAATAAATATCGTGTAAAAATATTA TCTCCTTCAGATGTTTTGAAGGAAGCAAGTTGATTATTTTCAGAGTAAAAAGTAAACAAA AATATTAGGAGGAAAATTTGATGAAGATTACAGTACCAGATGAATTGATAGCAGGTGAGT TGACAGAACAAATAGTAAGAAAGGTTTTAGATGCACTTGATGAACGACTGAAGGTAATGA ACAAGTCAGTGGAGCTTCCTCCGTATCCAAACAAATCAGAGGTGAAAAAAATTTTAGGCA TTGGTGATGACAAATTAACACATTGGATAAACCTAGGCTTAAAAACACAGCAGTGGAGCA AGTTAGACATCAGAATTGAACGATCGGAACTCCAAAGATTTTTGAAAGAAAACTTTGAGT TCTAAAGGCAAAGGAGAATGATTTTATGTCCTACACATTGCAACAAGAACATCAAATTCT CGGTTTGATTAAACAACGCAGGAAACAATTACAAGATGACCGTGCAGCGCTTAGAAAAGC CGATGAGCTATCAGATAGACAAGCTGAACTAATTGCTTCTGAACTTGAGGATTTGAGAAT GCTAGAAATAAAAAATAGGGAGATTAGATTATGAAGAAGACAGACACACTTTTTATAGGA TTCATTTTGGGGTTATTAGTGATTGTAGCGCACCAAAGTATTATCGGGGGAAGCTTGTTC GCAGCATTGATGGTTTTAATCAATCTGCTTGATTCAAAAGAAAGGAGCAACTATGGCACG AGAAGAAGCGCTAAAAATCGGTAAAGTGATTGCTGATAATTGGTGGGCAAATAGCCGCCC TATTATTTTAAGCAAGCAACATATCGAAAAGCAAAAAGCATGGCAACAAATAAAAAAGTG ACTCAGCCGACCAAAGCAATGAGTCACAAAGAAAATACATCATAAGGAGATGTTACCACA TGGAAAATGAACTTTCCACTCTAGATCAATATTTGACTGATCCTAGTTGGGGCAAATCGA ATGTCAAGGAAACAAATAATCGAAAAATCAGACGAAATCTTTTGACGAATGAAGAACTAT CATGTGATCAAGATGACTTGGGAAATTTTGTGAGTATTTGGGATCATGTTTACCTTATTC ATCTATCAAAACATTCAAACAAACCTGAATATATTTACGTCATCGAAGATGGCTTGACTG ATGCATTAGAAGAGTATGACAGAGATAACTTGATTGATATCTCTTATTACGGATCAGGTA AGAAATACATTGCTGAAATGGAGGCAGAATTTGATGAGTGAAAAGGAACAACCTTTGAAA AATAGAAGTGATAATACGCTTTTTAATAGCTTATACAAAATAAATGTTAAAGGTGTTACT GAAAAACGAAATAACCTCACTTATCTTTCGTGGGCATGGGCTTGGGCAGAAGTCAGCAAA ATTTGCGAAGAAATAGACTACGAAATCTATCGTGATCCAGAAACGCATCGTCCATACCTC TTTGATGAAAAAACAGGCTATATGGTTTTTACCAGTATCACAGTCAACGGAGTAAAGCGT GACATGTGGTTACCAGTCATGGATGGTGCAAACAAGGCAATGAAAGATGAGCCATATACC TACGAAGTCAATGATTATCAGTGGAATAACGAAACGAAGAAAAAAGAGATTGTTGGAAAA ATCGAAAAGCGAGTTGAAGCAGCAACTATGTTTGATATCAATAAAACAATCATGCGTTGT CTTGTAAAAAATCTAGCGATGTTTGGGCTAGGGCTATATATATTTGCTGGCGAAGATATG CCAGAAGATGTCTCGATGCTTGAACCAGCTAGCCAAAGAAGCAAAAAGCTATTCTTAGAT GCTTTACAACTGGTTGCTAACAAGTACGAAAAATCGATTGATGAAGCAATTGTTGCATTG ACTGATGCAGCTTCCATAACCGCTGATGACAGTAAATGGACCAAGAGAGACTTGGGCATT CTAAAACGAGGCGTTAATTGGCTTGAAGATCAGTACAGAGAAGAAACAAAAGAGAAGTGA TATGAGTGTTTAAACCATTAATCGATTCATATTCAGCGGTTCTGAAAAAGCTCAAAGGAA AAGACATAGGTGCAACGATCAATGAAGAAGTGAACATCGAACGTTTGAAGACGATGTACG ACGGCTACGATGGTGATCGAGTTATTGAAATTCGTTTTATTGATCCTAGACGTTTCACAG TACAGCAACGAAACTTCATCTATGCGCTCATAGGCGATATTTTCATCGATACAGGCATGC CAACGGACTTCTGGAAGGAATTCTTCTACTTCCGTTTTGAAGGCGTCACAGGGCGCAAAA TAAGCCTCAAAGACGAATCGAATACAACTGTGAGTGATGCTAATGTCTTAGCAAATATCA TCTTAGATTTCATCTTTGAACATCATATTCCTTTCAAAGAAGGCTATGAGATTTTACCAG CGAATCAAGAATATTACTTCTACAAATGCATTACAAAAAGAGTTTGTTGCATCTGTGGCA AAACAGGAGCTGACATCGATCACTTTGACAAAGCGCTGGGAAGACGAAAGCGCAAAGAAG TTGATCATTCAGAGTACACATTTGCAGCACTCTGCAGAATCCATCACACAGAGAAACACA AAATAGGTGTGATCAATTTCAAAAATAAATATCAAATCAAAGGGATTAAGTTAAACCGAG AGACAATCAAAAAGTTAAATATTGGAGGATAAAAGTGAGAACAATTAATGATAATTTTAA AAAATTAAAAGAAGTCGAAGATAGTCTAAATAAACTTAGAAAAGAGTTTGCAAAGAATGA AGAAGAACTCCTCAAAGAGATTAAATTGCAGAAGTCATATATTGAGCAATTTAATAATCA TGATGAGAATGTAGCTATCGGTACGCAACTAGTTGAAATAAGACGATATAAAGAATGGGA AAAAGAGCTGCGTTCACTTTTAAAATTCGCTATAAAAACTATTGAAAAAGGAAATCTACC TGTAATGCTCGAAGAAAAAGAGGTGTTTGGTTATTGGTATAACGAGGGGTTTCGGAGTGG TCATTCGAGAACAATCCGTCGATGGTGTGGTCAAGATTATTCGCATGAACGTGCTCAAAT CAGGTTTGTTGATGAAATGTATGAACCTGAGTATCAACTTACTTCGCAAGATACTTTAGC AGTATTGGCATATTTATCGCATACATTATCTCAGCTAGAGGAGGAATAATTTTGGCAGAA AGAAGAATGTTCGCAAAGACAATTATTGATTCTGATGCATTCCTAGATATGCCTTTATCG ACACAGGCATTATATTTCCATCTATCAATGCGCGCAGATGATGACGGATTTATTAATAAT CCCAAAAAAATACAACGTATGGTTGGTTGTGGTGATGATGATTTAAAACTGCTTATGGCA AAAAGATTCATCTTAGTTTTCGAGAGTGGCGTGATCGTCATTAAACATTGGAAAATACAC AACTATATTCGTAATGATCGCTACAAACCTACGTTATATCAGGATGAAAAAGCTTTACTA GCGGACAAAGATAACAAGGCTTACACATTTGCAGAAGAAATTCCTAAACATGATGAAAAA CTTGGTATACCAGATGACAACCAAACGGTACACCAAATGGATACACAGGTTAGGTTAGGT AAGGTTAGGTTAGGTAAGGTTAGTAAAGAGATAAAAGATATAACGCCTTCGAAAAAAACG AAGGCTAAGCCTATCCGTCATAAATACGGAGAGTATAAAAATGTGCTTTTGTCAGAAGAC CAAATGGAGAAACTCAAAACAGAATTCCCTAATGATTACCAAGAGCGAATCGAACGACTG TCAGAGTATTGTGAATCATCTGGTAAGACTTATAAAAACTATTTGGCAACTATTCGAAGT TGGGCAAGGAAAGAAAAAAGTGAACCTAAGAACGCAAGCAGTGGATACAAGCGCACAGGA AGACGAGAGAAGCTTCCTGAATGGGCAATCGACCAAGAAGCCTATCTCAAGAAAAAAGCG CTAGAAAGAGCTAATAGACAATCAAAAGCACCATTTTAAGAGGTGGAAAATTGAAAATCG ATTATCTAGAACTAATTAATGAAATATCGAACTATAAAAAGGGCGAGGAAATAGACATCC TGAGAGACGTTTATGAACAACTTGATGAAGCTGGAATCGAAGGGATTAAGAATGATCGTT CGAGTTGGAGTAAACTCAGATACTATTTCGCACTCTATATCGATACAACACAATTAAGAA ATTTAGCATATACCAGATTACTATTTGTTGATTGTGTTAAAGGCTTGCAAAAACATCTTA ATGAACTTGAGCAGGTGTAAACAAGATGGACCTAAAGACATTTACAGCACAGATCGAATT AATGCATCAAGAAGCTTTAAGACAAAGTGTGTCGTACGAAGACAAGTGGCTCAACACGTT TCATGGCGGACGTGAGAGCGCACTTGATCAAGTACTCAAATTATTGAAAGGAGAACTTCA GGATGGATAAGAAAGCAGCAATGAAACGAATCATCGAACTGACACATTCTGAGAATTGGC AAGAAGACAAAGAAATAGTTGCAGAAGTCCAAAAGCTTGGTAAATCAATGTGGACTGAAA AAACCAAACGGAGAACGCCGAGAAAGATTGCAATCTGGCATGATGACCGAATTTTAGTAA CAGGTACCGTTGAACAGCTATCTGAGATTACTAGACTGAGTAAAAATATTATTTGGGATA GGGCTAAACGCGAGAACGTTGATTCGAAAGGTCGTCAGTTTAAGTATGTGGAGGAGAAAA AATGGCAAGCGTTTTAAATGAACCAGTATATAGAGTTAAGGAATATTCTAAATTAAATCG TCTATATGCAGAAACAGAACAGCAAAGAGAAGTATTAGATGTATCCATGAAGCAAATATT TGTCGAATTTCCATGTTTTAATGGTGGTGTTTTAGGTATGTGGACAACGACTCGTATGGG AATTGAAATTGGTAGTCAAGCCGAAATAGAATTTGAAAGTGAGTTAAAGAAAGAGGAAAG TCAAGGCTACCGAATTTTAAAAAAGAAAAGCCGTACTTTGAAAAGGCTAAATGACATGAT TGGAGAAGAAATAGAAGCATTTAATTCTGCACAATCAAATTACCGATTTGAACTGCTTAC GCAATATGGCATGAACAATGTGAGTGGCGTACATTCTATTGATGGACAATTATACGTAAG TCTAAGAGCTGAACCAGAAAGAAATGAAGAAGAGCTAGAACCAATCGATTACAAAGAGTA CCTTTCGTTTTATATCAATGCTAAAACACAGGAGGACAGCAAATGATAAAAAAACTCATT CAATTCAGCATGGATTTATATGATATCGAATCAGGAGCAACACTATCTGTGGAATCGGAC CATCTAATCATAAATTTTGGTGGAAAGCGCCAGATTATTTTGTGGGTAGTTGATGATGTA CTGTTTCCAGAAATTGTTCATGATTTCGAAGAATCAAAAGCGGTTGAGTTTGAAATAGTG AAAAAAGTAATGGAATTGATTGAAAAATACGAGGAGGACAGCGAATGATACCGAGATTTC GAGCGTGGTACACACCATTTAAAGGTAAAACAATTGGACAAGAAATGAAATATGGGCAAG CAGGAAGGTTGATCACTCATGCTGAAATGGCTCCAGATAAATATGTGCTTATGCAATCCA CAGGAATGAAAGACAAGAATGGTGTGGAGATATTTGAAGGGGATTTGGTAGAGCATGACG ATAATTTAAATGGTGATTGGGAAACATTTGAAGCTTGTGAAGTTGTATATGACAAAGATT ACGCTCAATTTTGTTTTAAATGGGATGCCGGTAATTTCCTGACGGATTATCGCAATTTAA ATGTTATCGGAAATATCTACGAAAATCCAGAGTTATCGGGGGATGAACAGCGATGAATAA ACAAGAATTGATTGATGAATTAGCTAAATATGTAAAGAGTTATGAGAACGCTATGGATGA GCATGGTCAAGGAAGGTACGGCGCTTATGAAGTATCTTTAAAGTTGGTGAAAAGACTAAA TGAATCAAAAATTACAGACGAACAAGCTTGGAATAAGGTAGCTGAGGCTTATCCTGAATC GGCACAAAGCTTGAGAAACACTTTAGATAATGCTGTATTTGGTAAGACTGGTGAACATCA GAAACCAGTGGTGCCTAAGTTTGTGGCGGAGTGGTTTGAGGATAATAAACATGCACTAGA TTTAGCGATTTTTACGGCAATTAGAGAATTGGACGGTAAAAGATACCCACACGAGACAGA TTTTGAAAATTGGCTTGATAATGCTGAAAACAAACCAATCGAAACCCTCATCCGCATGAA AGACGGCTACGAGGTCGAGAAAGAGCCGTTGTACAGAGTTAAAATAGGCAAACTTTACTT AAAGGAACCTTTAGGTGATACTAGCAATTCTACAATTCTCACAACTTGGGATAAGAAACG TGCTTACCCGTTTAGTAGTTTTCATACGGCTGACAAACATTCTGATAAATTTGAGGGAGC AGTGGTAGAGGT
Region Details
| Region | 1 |
| Region Length | 12.9Kb |
| Completeness(score) | incomplete(20) |
| Specific Keyword | integrase |
| Region Position | 15351-28262 |
| # tRNA | 0 |
| # Total Proteins | 25 |
| # Phage Hit Proteins | 15 |
| # Hypothetical Proteins | 7 |
| Phage + Hypothetical Protein % | 88% |
| # Bacterial Proteins | 3 |
| Attachment Site | yes |
| # Phage Species | 14 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_phiEf11_NC_013696(3) PHAGE_Entero_vB_IME197_NC_028671(3) PHAGE_Entero_phiFL4A_NC_013644(2) PHAGE_Lactoc_bIL312_NC_002671(2) PHAGE_Lactoc_bIL285_NC_002666(2) PHAGE_Lactoc_bIL310_NC_002669(1) PHAGE_Vibrio_VAP7_NC_048765(1) PHAGE_Burkho_BcepSauron_NC_049851(1) PHAGE_Entero_phiFL2A_NC_013643(1) PHAGE_Strept_phiARI0746_NC_031907(1) PHAGE_Vibrio_YC_NC_048709(1) PHAGE_Cellul_phi38:1_NC_021796(1) PHAGE_Bacill_SPbeta_NC_001884(1) PHAGE_Lactoc_PLgT_1_NC_031016(1) PHAGE_Lactob_PLE2_NC_031036(1) PHAGE_Strept_EJ_1_NC_005294(1) PHAGE_Entero_phiFL1A_NC_013646(1) PHAGE_Entero_ECP3_NC_027335(1) PHAGE_Lactoc_LP0903_NC_049423(1) PHAGE_Entero_phiFL3A_NC_013648(1) PHAGE_Entero_vB_KleM_RaK2_NC_019526(1) PHAGE_Lactoc_98201_NC_031064(1) PHAGE_Lactoc_KSY1_NC_009817(1) PHAGE_Lactoc_63301_NC_031017(1) PHAGE_Lactob_phig1e_NC_004305(1) PHAGE_Lactob_Lb_NC_047983(1) PHAGE_Clostr_phiCT19406C_NC_029006(1) PHAGE_Strept_M102AD_NC_028984(1) PHAGE_Strept_M102_NC_012884(1) PHAGE_Lactob_LF1_NC_019486(1) PHAGE_Strept_SMP_NC_008721(1) PHAGE_Halocy_JM_2012_NC_017975(1) PHAGE_Entero_phiEF24C_NC_009904(1) PHAGE_Weisse_WCP30_NC_031101(1) PHAGE_Lactoc_Tuc2009_NC_002703(1) PHAGE_Strept_315.5_NC_004588(1) PHAGE_Entero_EFLK1_NC_029026(1) PHAGE_Lister_vB_LmoM_AG20_NC_020871(1) PHAGE_Lactob_LJ_NC_048680(1) PHAGE_Strept_315.3_NC_004586(1) PHAGE_Temper_phiNIH1.1_NC_003157(1) PHAGE_Lactob_J_1_NC_022756(1) PHAGE_Lactob_Sha1_NC_019489(1) PHAGE_Cellul_phi14:2_NC_021806(1) PHAGE_Serrat_BF_NC_041917(1) PHAGE_Strept_phiARI0468_2_NC_031923(1) PHAGE_Pectob_CBB_NC_041878(1) PHAGE_Lactoc_05601_NC_049397(1) PHAGE_Lactob_PL_1_NC_022757(1) PHAGE_Lactoc_51701_NC_049403(1) PHAGE_Entero_EFC_1_NC_025453(1) PHAGE_Strept_315.4_NC_004587(1) PHAGE_Lactoc_TP901_1_NC_002747(1) PHAGE_Strept_APCM01_NC_029030(1) PHAGE_Strept_MM1_NC_003050(1) PHAGE_Brocho_BL3_NC_015254(1) PHAGE_Bacill_0305phi8_36_NC_009760(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 12% |
| GC % | 36.11% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|ACOS01000025.1| Enterococcus faecium E1039 contig00025, whole genome shotgun 28262, gc%: 36.54%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 27 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 15351..15635 | PHAGE_Bacill_0305phi8_36_NC_009760: GroES; EfmE1039_0399; phage(gi156564025) | 1.21e-14 | Showinfo_outline |
| 2 | 15686..17311 | PHAGE_Vibrio_VAP7_NC_048765: hypothetical protein; EfmE1039_0400; phage(gi100134) | 4.03e-121 | Showinfo_outline |
| 3 | 16209..16223 | attL | 0.0 | Showinfo_outline |
| 4 | complement(17400..18539) | PHAGE_Lactoc_bIL312_NC_002671: integrase; EfmE1039_0401; phage(gi13095892) | 8.70e-76 | Showinfo_outline |
| 5 | complement(18643..19344) | lipoprotein, putative; EfmE1039_0402 | 0.0 | Showinfo_outline |
| 6 | complement(19341..19472) | hypothetical protein; EfmE1039_0403 | 0.0 | Showinfo_outline |
| 7 | complement(19469..19900) | PHAGE_Lactoc_98201_NC_031064: hypothetical protein; EfmE1039_0404; phage(gi100003) | 3.61e-07 | Showinfo_outline |
| 8 | complement(19918..20238) | PHAGE_Lactoc_PLgT_1_NC_031016: hypothetical protein; EfmE1039_0405; phage(gi100063) | 1.27e-25 | Showinfo_outline |
| 9 | 20531..20722 | PHAGE_Strept_phiARI0746_NC_031907: hypothetical protein; EfmE1039_0406; phage(gi100038) | 9.66e-12 | Showinfo_outline |
| 10 | 20736..21491 | PHAGE_Lactob_LJ_NC_048680: hypothetical protein; EfmE1039_0407; phage(gi100064) | 1.61e-77 | Showinfo_outline |
| 11 | 21504..21803 | PHAGE_Lactoc_bIL312_NC_002671: excisionase; EfmE1039_0408; phage(gi13095898) | 2.14e-10 | Showinfo_outline |
| 12 | 21851..22135 | Xis; EfmE1039_0409 | 0.0 | Showinfo_outline |
| 13 | 22156..22344 | PHAGE_Entero_phiFL1A_NC_013646: hypothetical protein; EfmE1039_0410; phage(gi281416332) | 2.21e-13 | Showinfo_outline |
| 14 | 22341..22514 | hypothetical protein; EfmE1039_0411 | 0.0 | Showinfo_outline |
| 15 | 22483..22611 | hypothetical protein; EfmE1039_0412 | 0.0 | Showinfo_outline |
| 16 | 22670..23011 | hypothetical protein; EfmE1039_0413 | 0.0 | Showinfo_outline |
| 17 | 23004..23750 | PHAGE_Lactoc_bIL285_NC_002666: Orf14; EfmE1039_0414; phage(gi13095694) | 2.03e-50 | Showinfo_outline |
| 18 | 23756..24442 | PHAGE_Entero_phiEf11_NC_013696: hypothetical protein; EfmE1039_0415; phage(gi282598737) | 2.40e-112 | Showinfo_outline |
| 19 | 24445..24939 | hypothetical protein; EfmE1039_0416 | 0.0 | Showinfo_outline |
| 20 | 24942..25769 | PHAGE_Entero_vB_IME197_NC_028671: replication initiation protein; EfmE1039_0417; phage(gi966198985) | 7.50e-49 | Showinfo_outline |
| 21 | 26056..26220 | hypothetical protein; EfmE1039_0418 | 0.0 | Showinfo_outline |
| 22 | 26213..26527 | conserved hypothetical protein; EfmE1039_0419 | 0.0 | Showinfo_outline |
| 23 | 26512..27036 | PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; EfmE1039_0420; phage(gi9630275) | 3.18e-06 | Showinfo_outline |
| 24 | 27033..27278 | hypothetical protein; EfmE1039_0421 | 0.0 | Showinfo_outline |
| 25 | 27196..27210 | attR | 0.0 | Showinfo_outline |
| 26 | 27275..27646 | PHAGE_Weisse_WCP30_NC_031101: hypothetical protein; EfmE1039_0422; phage(gi100024) | 1.04e-13 | Showinfo_outline |
| 27 | 27643..28262 | PHAGE_Entero_phiEF24C_NC_009904: hypothetical protein; EfmE1039_0423; phage(gi158079456) | 1.44e-37 | Showinfo_outline |
Sequence
>15351..15635
EnterococcusfaeciumE1039MLKPLGDRVIIEVAKEEEKTVGGIVLASAAKEKPQTGTVVAVGEGRLLENGEKVPAAVKAGDQVMFEKYAGTEIKYEGKEYLIVAGKDIMAIVE
Sequence
>15686..17311
EnterococcusfaeciumE1039MAKELKFAEDARAAMLRGVDKLADTVKVTLGPKGRNVVLEKSYGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPLGIRRGIELATKAAVEELHNISTVVDSKEAIAQVAAVSSGSDKVGHLIADAMEKVGNDGVITIEESKGIETELDVVEGMQFDRGYLSQYMVTDNDKMEAVLENPYILITDKKISNIQDILPLLEQILQQSRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITDDLGLELKDATIENLGNASKVVVDKDNTTIVEGSGEKEAIEARVQLIKNQIAETTSDFDREKLQERLAKLAGGVAVVKVGAATETELKELKLRIEDALNATRAAVEEGMVSGGGTALVNVISKVSAVEAEGDVATGIKIVVRALEEPIRQIAENAGYEGSVIVDKLKNVELGTGFNAATGEWVNMVEAGIVDPTKVTRSALQNAASVSALLLTTEAVVADKPEPAAPAAPAMDPSMMGGMM
Sequence
>16209..16223
TCGAAGAATCAAAAG
Sequence
>complement(17400..18539)
EnterococcusfaeciumE1039MWVEQTKDGRFKFIERYVDPYTEKTRKKSTTLTSNSPQAWKKAQKILDKKIKEALEDYNKSDITFGELYKEWYEYYKQHVKRTSYLKVPMMMKHVSKHISDDTIVRNIDETLINKIIEDMYTFGDLSLNYTKQTKTTLSVMLNYAIDRKYIQRNPALAVKIHPKKVEEEKRRLSMNKKYLEKEEIDQILKQLYSNPRRKLHGIIAEFLYLTGLRYGELLALQMKDYEDGKISINGTLDYTSVKMDNAIKTTPKNTYSQREVQLPNRAKELIESVIADNILAGRPTDPDQYIFISTSGTPLTLHSFNAILHKVEEELELEKSLSSHIFRHSHVSLLSELGVPLKAIMERVGHSDANTTLSIYNHVTKRAKQQVIDKLNSL
Sequence
>complement(18643..19344)
EnterococcusfaeciumE1039MKKFFVTILKYLALIIGVLSCLMSFIVLPVTLVFLPLGIFLIFMGLKPVEYLDGTIAKRKKEEKELAEKEQKEELNRMIRQLEKEDLSKRAALIDGVNLKSNEFCYYTPKQRVKWQEQKTRTVRTNYSGLSSNIRIAKGLNYRMGSIKHNSNKVTEWNDVFIGVPFLTNKRIIFVNENGMKVINLSNIVGIKAFSDGTHLYRESGKIILLRDFDATEFNVILNRILNKDFEAH
Sequence
>complement(19341..19472)
EnterococcusfaeciumE1039MNTSRIIKEIVFSNTLKKARAATRTILTSFKIGKSIISKEENL
Sequence
>complement(19469..19900)
EnterococcusfaeciumE1039MYLKLKEMLSEYNLKVVYMEMKEPGFYYPKPRIIFLNENLYGETAEAFHLSHELAHFSASHFEFSVLYDTSTTFHSKFETEADKVAILILLNIYIENELTDESQFNLEKFMEYYSIQNKLRYTCYAVCQCYFKKKYSYARQYV
Sequence
>complement(19918..20238)
EnterococcusfaeciumE1039MTLFERIKSLANQRDKSMKEVALELGFSENLFYRWKTTEPKARDLQKVADYFDVSVDYLLGREEKETPKHVDLSEDDTVFSFDGKEISKETMRKAIAIAKALEENK
Sequence
>20531..20722
EnterococcusfaeciumE1039MSNLDNGRAAIKNFMRENGVTMEDLATAYGYTRVRMQQIIDGHWSGPKANKTILEIIRDYRIR
Sequence
>20736..21491
EnterococcusfaeciumE1039MKELIKVTTNENNEQLVRGRELHEFLEVKDNYTDWFKRMITYGFDENVDFIGLSEKSDKLGGRPRIDHAMKLDMAKEISMIQRTEKGKQARQYFIQVEKEYKQQLLDTSNLSPELQMFQGIFTAVAKQEIATKQLEAKIDSVSEIIALNTLDWRKNANSLINQVARVQGGGGAHRTVRNEIYKEVERRAGANLSQRVTNKRRRMADEGVCKSKRDKLNQVDVIADDKKLVEIYLSVVKDYAIKHRVWNDNF
Sequence
>21504..21803
EnterococcusfaeciumE1039MKKPTLSELIEAAEKAVKPDDWYRQSLILEKFHGMSKTTLVEYCKEMETIPEFSEGIVRPGHSTTFIHYHTFIWFLKWKDANKYRVKILSPSDVLKEAS
Sequence
>21851..22135
EnterococcusfaeciumE1039MKITVPDELIAGELTEQIVRKVLDALDERLKVMNKSVELPPYPNKSEVKKILGIGDDKLTHWINLGLKTQQWSKLDIRIERSELQRFLKENFEF
Sequence
>22156..22344
EnterococcusfaeciumE1039MSYTLQQEHQILGLIKQRRKQLQDDRAALRKADELSDRQAELIASELEDLRMLEIKNREIRL
Sequence
>22341..22514
EnterococcusfaeciumE1039MKKTDTLFIGFILGLLVIVAHQSIIGGSLFAALMVLINLLDSKERSNYGTRRSAKNR
Sequence
>22483..22611
EnterococcusfaeciumE1039MAREEALKIGKVIADNWWANSRPIILSKQHIEKQKAWQQIKK
Sequence
>22670..23011
EnterococcusfaeciumE1039MENELSTLDQYLTDPSWGKSNVKETNNRKIRRNLLTNEELSCDQDDLGNFVSIWDHVYLIHLSKHSNKPEYIYVIEDGLTDALEEYDRDNLIDISYYGSGKKYIAEMEAEFDE
Sequence
>23004..23750
EnterococcusfaeciumE1039MSEKEQPLKNRSDNTLFNSLYKINVKGVTEKRNNLTYLSWAWAWAEVSKICEEIDYEIYRDPETHRPYLFDEKTGYMVFTSITVNGVKRDMWLPVMDGANKAMKDEPYTYEVNDYQWNNETKKKEIVGKIEKRVEAATMFDINKTIMRCLVKNLAMFGLGLYIFAGEDMPEDVSMLEPASQRSKKLFLDALQLVANKYEKSIDEAIVALTDAASITADDSKWTKRDLGILKRGVNWLEDQYREETKEK
Sequence
>23756..24442
EnterococcusfaeciumE1039MFKPLIDSYSAVLKKLKGKDIGATINEEVNIERLKTMYDGYDGDRVIEIRFIDPRRFTVQQRNFIYALIGDIFIDTGMPTDFWKEFFYFRFEGVTGRKISLKDESNTTVSDANVLANIILDFIFEHHIPFKEGYEILPANQEYYFYKCITKRVCCICGKTGADIDHFDKALGRRKRKEVDHSEYTFAALCRIHHTEKHKIGVINFKNKYQIKGIKLNRETIKKLNIGG
Sequence
>24445..24939
EnterococcusfaeciumE1039MRTINDNFKKLKEVEDSLNKLRKEFAKNEEELLKEIKLQKSYIEQFNNHDENVAIGTQLVEIRRYKEWEKELRSLLKFAIKTIEKGNLPVMLEEKEVFGYWYNEGFRSGHSRTIRRWCGQDYSHERAQIRFVDEMYEPEYQLTSQDTLAVLAYLSHTLSQLEEE
Sequence
>24942..25769
EnterococcusfaeciumE1039MAERRMFAKTIIDSDAFLDMPLSTQALYFHLSMRADDDGFINNPKKIQRMVGCGDDDLKLLMAKRFILVFESGVIVIKHWKIHNYIRNDRYKPTLYQDEKALLADKDNKAYTFAEEIPKHDEKLGIPDDNQTVHQMDTQVRLGKVRLGKVSKEIKDITPSKKTKAKPIRHKYGEYKNVLLSEDQMEKLKTEFPNDYQERIERLSEYCESSGKTYKNYLATIRSWARKEKSEPKNASSGYKRTGRREKLPEWAIDQEAYLKKKALERANRQSKAPF
Sequence
>26056..26220
EnterococcusfaeciumE1039MDLKTFTAQIELMHQEALRQSVSYEDKWLNTFHGGRESALDQVLKLLKGELQDG
Sequence
>26213..26527
EnterococcusfaeciumE1039MDKKAAMKRIIELTHSENWQEDKEIVAEVQKLGKSMWTEKTKRRTPRKIAIWHDDRILVTGTVEQLSEITRLSKNIIWDRAKRENVDSKGRQFKYVEEKKWQAF
Sequence
>26512..27036
EnterococcusfaeciumE1039MASVLNEPVYRVKEYSKLNRLYAETEQQREVLDVSMKQIFVEFPCFNGGVLGMWTTTRMGIEIGSQAEIEFESELKKEESQGYRILKKKSRTLKRLNDMIGEEIEAFNSAQSNYRFELLTQYGMNNVSGVHSIDGQLYVSLRAEPERNEEELEPIDYKEYLSFYINAKTQEDSK
Sequence
>27033..27278
EnterococcusfaeciumE1039MIKKLIQFSMDLYDIESGATLSVESDHLIINFGGKRQIILWVVDDVLFPEIVHDFEESKAVEFEIVKKVMELIEKYEEDSE
Sequence
>27196..27210
TCGAAGAATCAAAAG
Sequence
>27275..27646
EnterococcusfaeciumE1039MIPRFRAWYTPFKGKTIGQEMKYGQAGRLITHAEMAPDKYVLMQSTGMKDKNGVEIFEGDLVEHDDNLNGDWETFEACEVVYDKDYAQFCFKWDAGNFLTDYRNLNVIGNIYENPELSGDEQR
Sequence
>27643..28262
EnterococcusfaeciumE1039MNKQELIDELAKYVKSYENAMDEHGQGRYGAYEVSLKLVKRLNESKITDEQAWNKVAEAYPESAQSLRNTLDNAVFGKTGEHQKPVVPKFVAEWFEDNKHALDLAIFTAIRELDGKRYPHETDFENWLDNAENKPIETLIRMKDGYEVEKEPLYRVKIGKLYLKEPLGDTSNSTILTTWDKKRAYPFSSFHTADKHSDKFEGAVVEV
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 28262 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: EfmE1039_0399 (Region 1)
Locus: EfmE1039_0399ORF Start: 15351
ORF Stop: 15635
Strand: Forward
Protein Sequence: MLKPLGDRVIIEVAKEEEKTVGGIVLASAAKEKPQTGTVVAVGEGRLLENGEKVPAAVKAGDQVMFEKYAGTEIKYEGKEYLIVAGKDIMAIVE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: EfmE1039_0399, GroES, phage(gi156564025), PHAGE_Bacill_0305phi8_36_NC_009760
Homolog/Ortholog E-Value: 1.21e-14
Locus 2: EfmE1039_0400 (Region 1)
Locus: EfmE1039_0400ORF Start: 15686
ORF Stop: 17311
Strand: Forward
Protein Sequence: MAKELKFAEDARAAMLRGVDKLADTVKVTLGPKGRNVVLEKSYGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPLGIRRGIELATKAAVEELHNISTVVDSKEAIAQVAAVSSGSDKVGHLIADAMEKVGNDGVITIEESKGIETELDVVEGMQFDRGYLSQYMVTDNDKMEAVLENPYILITDKKISNIQDILPLLEQILQQSRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITDDLGLELKDATIENLGNASKVVVDKDNTTIVEGSGEKEAIEARVQLIKNQIAETTSDFDREKLQERLAKLAGGVAVVKVGAATETELKELKLRIEDALNATRAAVEEGMVSGGGTALVNVISKVSAVEAEGDVATGIKIVVRALEEPIRQIAENAGYEGSVIVDKLKNVELGTGFNAATGEWVNMVEAGIVDPTKVTRSALQNAASVSALLLTTEAVVADKPEPAAPAAPAMDPSMMGGMM
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0400, hypothetical protein, phage(gi100134), PHAGE_Vibrio_VAP7_NC_048765
Homolog/Ortholog E-Value: 4.03e-121
Locus 3: attL (Region 1)
Locus: attLORF Start: 16209
ORF Stop: 16223
Strand: Forward
Protein Sequence: TCGAAGAATCAAAAG
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 4: EfmE1039_0401 (Region 1)
Locus: EfmE1039_0401ORF Start: 17400
ORF Stop: 18539
Strand: Backward
Protein Sequence: MWVEQTKDGRFKFIERYVDPYTEKTRKKSTTLTSNSPQAWKKAQKILDKKIKEALEDYNKSDITFGELYKEWYEYYKQHVKRTSYLKVPMMMKHVSKHISDDTIVRNIDETLINKIIEDMYTFGDLSLNYTKQTKTTLSVMLNYAIDRKYIQRNPALAVKIHPKKVEEEKRRLSMNKKYLEKEEIDQILKQLYSNPRRKLHGIIAEFLYLTGLRYGELLALQMKDYEDGKISINGTLDYTSVKMDNAIKTTPKNTYSQREVQLPNRAKELIESVIADNILAGRPTDPDQYIFISTSGTPLTLHSFNAILHKVEEELELEKSLSSHIFRHSHVSLLSELGVPLKAIMERVGHSDANTTLSIYNHVTKRAKQQVIDKLNSL
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: EfmE1039_0401, integrase, phage(gi13095892), PHAGE_Lactoc_bIL312_NC_002671
Homolog/Ortholog E-Value: 8.70e-76
Locus 5: EfmE1039_0402 (Region 1)
Locus: EfmE1039_0402ORF Start: 18643
ORF Stop: 19344
Strand: Backward
Protein Sequence: MKKFFVTILKYLALIIGVLSCLMSFIVLPVTLVFLPLGIFLIFMGLKPVEYLDGTIAKRKKEEKELAEKEQKEELNRMIRQLEKEDLSKRAALIDGVNLKSNEFCYYTPKQRVKWQEQKTRTVRTNYSGLSSNIRIAKGLNYRMGSIKHNSNKVTEWNDVFIGVPFLTNKRIIFVNENGMKVINLSNIVGIKAFSDGTHLYRESGKIILLRDFDATEFNVILNRILNKDFEAH
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: EfmE1039_0402, lipoprotein, putative
Homolog/Ortholog E-Value: N/A
Locus 6: EfmE1039_0403 (Region 1)
Locus: EfmE1039_0403ORF Start: 19341
ORF Stop: 19472
Strand: Backward
Protein Sequence: MNTSRIIKEIVFSNTLKKARAATRTILTSFKIGKSIISKEENL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0403, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 7: EfmE1039_0404 (Region 1)
Locus: EfmE1039_0404ORF Start: 19469
ORF Stop: 19900
Strand: Backward
Protein Sequence: MYLKLKEMLSEYNLKVVYMEMKEPGFYYPKPRIIFLNENLYGETAEAFHLSHELAHFSASHFEFSVLYDTSTTFHSKFETEADKVAILILLNIYIENELTDESQFNLEKFMEYYSIQNKLRYTCYAVCQCYFKKKYSYARQYV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0404, hypothetical protein, phage(gi100003), PHAGE_Lactoc_98201_NC_031064
Homolog/Ortholog E-Value: 3.61e-07
Locus 8: EfmE1039_0405 (Region 1)
Locus: EfmE1039_0405ORF Start: 19918
ORF Stop: 20238
Strand: Backward
Protein Sequence: MTLFERIKSLANQRDKSMKEVALELGFSENLFYRWKTTEPKARDLQKVADYFDVSVDYLLGREEKETPKHVDLSEDDTVFSFDGKEISKETMRKAIAIAKALEENK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0405, hypothetical protein, phage(gi100063), PHAGE_Lactoc_PLgT_1_NC_031016
Homolog/Ortholog E-Value: 1.27e-25
Locus 9: EfmE1039_0406 (Region 1)
Locus: EfmE1039_0406ORF Start: 20531
ORF Stop: 20722
Strand: Forward
Protein Sequence: MSNLDNGRAAIKNFMRENGVTMEDLATAYGYTRVRMQQIIDGHWSGPKANKTILEIIRDYRIR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0406, hypothetical protein, phage(gi100038), PHAGE_Strept_phiARI0746_NC_031907
Homolog/Ortholog E-Value: 9.66e-12
Locus 10: EfmE1039_0407 (Region 1)
Locus: EfmE1039_0407ORF Start: 20736
ORF Stop: 21491
Strand: Forward
Protein Sequence: MKELIKVTTNENNEQLVRGRELHEFLEVKDNYTDWFKRMITYGFDENVDFIGLSEKSDKLGGRPRIDHAMKLDMAKEISMIQRTEKGKQARQYFIQVEKEYKQQLLDTSNLSPELQMFQGIFTAVAKQEIATKQLEAKIDSVSEIIALNTLDWRKNANSLINQVARVQGGGGAHRTVRNEIYKEVERRAGANLSQRVTNKRRRMADEGVCKSKRDKLNQVDVIADDKKLVEIYLSVVKDYAIKHRVWNDNF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0407, hypothetical protein, phage(gi100064), PHAGE_Lactob_LJ_NC_048680
Homolog/Ortholog E-Value: 1.61e-77
Locus 11: EfmE1039_0408 (Region 1)
Locus: EfmE1039_0408ORF Start: 21504
ORF Stop: 21803
Strand: Forward
Protein Sequence: MKKPTLSELIEAAEKAVKPDDWYRQSLILEKFHGMSKTTLVEYCKEMETIPEFSEGIVRPGHSTTFIHYHTFIWFLKWKDANKYRVKILSPSDVLKEAS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: EfmE1039_0408, excisionase, phage(gi13095898), PHAGE_Lactoc_bIL312_NC_002671
Homolog/Ortholog E-Value: 2.14e-10
Locus 12: EfmE1039_0409 (Region 1)
Locus: EfmE1039_0409ORF Start: 21851
ORF Stop: 22135
Strand: Forward
Protein Sequence: MKITVPDELIAGELTEQIVRKVLDALDERLKVMNKSVELPPYPNKSEVKKILGIGDDKLTHWINLGLKTQQWSKLDIRIERSELQRFLKENFEF
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: EfmE1039_0409, Xis
Homolog/Ortholog E-Value: N/A
Locus 13: EfmE1039_0410 (Region 1)
Locus: EfmE1039_0410ORF Start: 22156
ORF Stop: 22344
Strand: Forward
Protein Sequence: MSYTLQQEHQILGLIKQRRKQLQDDRAALRKADELSDRQAELIASELEDLRMLEIKNREIRL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0410, hypothetical protein, phage(gi281416332), PHAGE_Entero_phiFL1A_NC_013646
Homolog/Ortholog E-Value: 2.21e-13
Locus 14: EfmE1039_0411 (Region 1)
Locus: EfmE1039_0411ORF Start: 22341
ORF Stop: 22514
Strand: Forward
Protein Sequence: MKKTDTLFIGFILGLLVIVAHQSIIGGSLFAALMVLINLLDSKERSNYGTRRSAKNR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0411, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 15: EfmE1039_0412 (Region 1)
Locus: EfmE1039_0412ORF Start: 22483
ORF Stop: 22611
Strand: Forward
Protein Sequence: MAREEALKIGKVIADNWWANSRPIILSKQHIEKQKAWQQIKK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0412, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 16: EfmE1039_0413 (Region 1)
Locus: EfmE1039_0413ORF Start: 22670
ORF Stop: 23011
Strand: Forward
Protein Sequence: MENELSTLDQYLTDPSWGKSNVKETNNRKIRRNLLTNEELSCDQDDLGNFVSIWDHVYLIHLSKHSNKPEYIYVIEDGLTDALEEYDRDNLIDISYYGSGKKYIAEMEAEFDE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0413, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 17: EfmE1039_0414 (Region 1)
Locus: EfmE1039_0414ORF Start: 23004
ORF Stop: 23750
Strand: Forward
Protein Sequence: MSEKEQPLKNRSDNTLFNSLYKINVKGVTEKRNNLTYLSWAWAWAEVSKICEEIDYEIYRDPETHRPYLFDEKTGYMVFTSITVNGVKRDMWLPVMDGANKAMKDEPYTYEVNDYQWNNETKKKEIVGKIEKRVEAATMFDINKTIMRCLVKNLAMFGLGLYIFAGEDMPEDVSMLEPASQRSKKLFLDALQLVANKYEKSIDEAIVALTDAASITADDSKWTKRDLGILKRGVNWLEDQYREETKEK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: EfmE1039_0414, Orf14, phage(gi13095694), PHAGE_Lactoc_bIL285_NC_002666
Homolog/Ortholog E-Value: 2.03e-50
Locus 18: EfmE1039_0415 (Region 1)
Locus: EfmE1039_0415ORF Start: 23756
ORF Stop: 24442
Strand: Forward
Protein Sequence: MFKPLIDSYSAVLKKLKGKDIGATINEEVNIERLKTMYDGYDGDRVIEIRFIDPRRFTVQQRNFIYALIGDIFIDTGMPTDFWKEFFYFRFEGVTGRKISLKDESNTTVSDANVLANIILDFIFEHHIPFKEGYEILPANQEYYFYKCITKRVCCICGKTGADIDHFDKALGRRKRKEVDHSEYTFAALCRIHHTEKHKIGVINFKNKYQIKGIKLNRETIKKLNIGG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0415, hypothetical protein, phage(gi282598737), PHAGE_Entero_phiEf11_NC_013696
Homolog/Ortholog E-Value: 2.40e-112
Locus 19: EfmE1039_0416 (Region 1)
Locus: EfmE1039_0416ORF Start: 24445
ORF Stop: 24939
Strand: Forward
Protein Sequence: MRTINDNFKKLKEVEDSLNKLRKEFAKNEEELLKEIKLQKSYIEQFNNHDENVAIGTQLVEIRRYKEWEKELRSLLKFAIKTIEKGNLPVMLEEKEVFGYWYNEGFRSGHSRTIRRWCGQDYSHERAQIRFVDEMYEPEYQLTSQDTLAVLAYLSHTLSQLEEE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0416, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 20: EfmE1039_0417 (Region 1)
Locus: EfmE1039_0417ORF Start: 24942
ORF Stop: 25769
Strand: Forward
Protein Sequence: MAERRMFAKTIIDSDAFLDMPLSTQALYFHLSMRADDDGFINNPKKIQRMVGCGDDDLKLLMAKRFILVFESGVIVIKHWKIHNYIRNDRYKPTLYQDEKALLADKDNKAYTFAEEIPKHDEKLGIPDDNQTVHQMDTQVRLGKVRLGKVSKEIKDITPSKKTKAKPIRHKYGEYKNVLLSEDQMEKLKTEFPNDYQERIERLSEYCESSGKTYKNYLATIRSWARKEKSEPKNASSGYKRTGRREKLPEWAIDQEAYLKKKALERANRQSKAPF
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: EfmE1039_0417, replication initiation protein, phage(gi966198985), PHAGE_Entero_vB_IME197_NC_028671
Homolog/Ortholog E-Value: 7.50e-49
Locus 21: EfmE1039_0418 (Region 1)
Locus: EfmE1039_0418ORF Start: 26056
ORF Stop: 26220
Strand: Forward
Protein Sequence: MDLKTFTAQIELMHQEALRQSVSYEDKWLNTFHGGRESALDQVLKLLKGELQDG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0418, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 22: EfmE1039_0419 (Region 1)
Locus: EfmE1039_0419ORF Start: 26213
ORF Stop: 26527
Strand: Forward
Protein Sequence: MDKKAAMKRIIELTHSENWQEDKEIVAEVQKLGKSMWTEKTKRRTPRKIAIWHDDRILVTGTVEQLSEITRLSKNIIWDRAKRENVDSKGRQFKYVEEKKWQAF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0419, conserved hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 23: EfmE1039_0420 (Region 1)
Locus: EfmE1039_0420ORF Start: 26512
ORF Stop: 27036
Strand: Forward
Protein Sequence: MASVLNEPVYRVKEYSKLNRLYAETEQQREVLDVSMKQIFVEFPCFNGGVLGMWTTTRMGIEIGSQAEIEFESELKKEESQGYRILKKKSRTLKRLNDMIGEEIEAFNSAQSNYRFELLTQYGMNNVSGVHSIDGQLYVSLRAEPERNEEELEPIDYKEYLSFYINAKTQEDSK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0420, hypothetical protein, phage(gi9630275), PHAGE_Bacill_SPbeta_NC_001884
Homolog/Ortholog E-Value: 3.18e-06
Locus 24: EfmE1039_0421 (Region 1)
Locus: EfmE1039_0421ORF Start: 27033
ORF Stop: 27278
Strand: Forward
Protein Sequence: MIKKLIQFSMDLYDIESGATLSVESDHLIINFGGKRQIILWVVDDVLFPEIVHDFEESKAVEFEIVKKVMELIEKYEEDSE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0421, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 25: attR (Region 1)
Locus: attRORF Start: 27196
ORF Stop: 27210
Strand: Forward
Protein Sequence: TCGAAGAATCAAAAG
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 26: EfmE1039_0422 (Region 1)
Locus: EfmE1039_0422ORF Start: 27275
ORF Stop: 27646
Strand: Forward
Protein Sequence: MIPRFRAWYTPFKGKTIGQEMKYGQAGRLITHAEMAPDKYVLMQSTGMKDKNGVEIFEGDLVEHDDNLNGDWETFEACEVVYDKDYAQFCFKWDAGNFLTDYRNLNVIGNIYENPELSGDEQR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0422, hypothetical protein, phage(gi100024), PHAGE_Weisse_WCP30_NC_031101
Homolog/Ortholog E-Value: 1.04e-13
Locus 27: EfmE1039_0423 (Region 1)
Locus: EfmE1039_0423ORF Start: 27643
ORF Stop: 28262
Strand: Forward
Protein Sequence: MNKQELIDELAKYVKSYENAMDEHGQGRYGAYEVSLKLVKRLNESKITDEQAWNKVAEAYPESAQSLRNTLDNAVFGKTGEHQKPVVPKFVAEWFEDNKHALDLAIFTAIRELDGKRYPHETDFENWLDNAENKPIETLIRMKDGYEVEKEPLYRVKIGKLYLKEPLGDTSNSTILTTWDKKRAYPFSSFHTADKHSDKFEGAVVEV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: EfmE1039_0423, hypothetical protein, phage(gi158079456), PHAGE_Entero_phiEF24C_NC_009904
Homolog/Ortholog E-Value: 1.44e-37
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download