Submission Results
Sequence Name: Not Available
GenBank Accession Number: NZ_QUFM01000007.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: NZ_QUFM01000007.1.PHASTER.zip
gi|00000000|ref|NZ_QUFM01000007.1| Roseburia sp. AF25-18LB AF25-18LB.Scaf7, whole genome shotgun 130249, gc%: 43.66%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
---|---|---|---|---|---|---|---|---|
1 | 19Kb | incomplete | 40 | 11 | 15304-34401 info_outline | PHAGE_Bacill_WBeta_NC_007734(1) | 52.63% | Show info_outline |
>1 15304-34401 TGAGAAAATCCAGTTTATCAAGCTGGCTGGCCTGTGCCGTTAGAAACTCTTTTTGTTTTT GCACAGGGACTTCATTTTCAAGCAGAGTGCTGTTAATCATTTTCAAGTTCGCAATCGGGG TCTTGACCTGATGGGAGATGTCGGAAATCAGTTCTTGCAGGTCAGCCCGTTCTTGTGCAA TGCCGTTCTTGTTTTCCTGCATGACTTCATATAAACGGTTCAGCCGATATTCAATTTTAT AGAAAAGACTTTCTTCTTCCACAGTCTGTTTCGGCTGCATATTCCCGGATAACATATCAT CCATTAAACTGCAAAAAGCATCGGAGAACATTGCCAGTTTGCGGCGAACCAGCACCATAA AACAAACAGCGCAAACCAGCACAAAAATGCCGAACAATAATACATACCAGACAGCGGTTA TATTTTGGGTCAGCCCATACAAAGCTGCTGAAACCGTCCCCATTGCCACCAGCAGGAGAA CAGCAAAAAAGATACAGGCTTTGTTGACGGAAAGTTTTCGCACATTCATTTCAGCACTCC TCCGATCCACATATAGCCCATACCATATACCGTTTTGATATACTGACGGTCAGGTGTTTC GATTTTGTTTCGTACCCGGCTGATCGCCGCAGTCAGAGCGTGTTCATCCACAAAATTTCC GTCTGCGTCCCACAGCTTTTCCAACAAGACTTGCCGGGTCAAAACAATCTGCGGATTTTT CATCAGGATTTTCAAAAGTCGATATTCCAGTGGGGTGAATGTAAGTGGCTTTCCTGATAG AGTAGCACTCATTTCTGAAAAATTGATGGTCAGTGTGCCATCCTCATAAGTATCACCACC ATATTGTTTTGTCAGCCTACCCAGCACTACCGCTAATTTCTTTTGAAAGACGCTCATAGG GAAAGGTTTTGTCACATAATCCTCTGCGCCCAGTTCATACCCTTTGAGCATATCGCTTTC CATATCATTTGCGGTCAGAAAAATAATAACGGTATCAGGGCGACGCTCTTTTATTTCCCG GCAGAAGTCAAAACCGTTCCCGTCCGGCAAATTTACATCCAGCACAATCAGGTCATAGTC CTGCTTTGTCAAGAAACTACTGGCCACTGATTTTGTCAGTGCAGAATCAACCGTATAGCC CGCAGTATTCAAGTTATAGCATAAAGTATTATTCAAAAGCCGATCATCCTCGACTACTAA AATTCGCATGGTATCACACTCCTTCATTTTCAGTATAGCACCCAAATGTCACAGAAACCT CACAATATTTCTGATTTTATTTTAGATACCAACCTCTGATCTTCGGGACAAATTGTCCCA AAGTTATAGGTATATTGTACCTCACATTTCCGCGATCATCAATTTTGCGTATGTGAAATT AAATAGTCAGTAGTATGAAATACAAAGTCGTTCAAATAATATCACATGAAATGTAAAATC ATATCAGGTGATGTTATGAAGATAGAACGAGATGAAAGACGCTTTGATTTTCACGATATA GGGCTCGCCATCAAGCGTGCAAGAGAAGCCAGCGGCATGACACAGGAGCAACTGGCCTAT ATTGTTGACCGCGCTCCGCGTACCATTATGTATAATGAAAATGATGGTCAGCATCCAAGC TTCAACACCTTTTATCAGATGGTTACAATGTTTGATATATCGGTGGATCAATACTTTTAC CCGTCCCAGAATAGCGGGAGCGAGTGCAGGAAGCGGATTGATGCCATGTTGAACGCCTTG GACGAAAGAGAATTGAAAATCGTTGAAGCTACAATCCAAGCGATGAAAGCATCGAAAGAA ACGGAGGAAACGTAAAAGAAAGCGTAACCTCCGTTTTTTGCGCCATGTTGCGGGTTGCGC GTTTTGGCAAGCAATTCGGGTGTGGCCACACTCCGAAATTTTTGCAGGGCGCAGGGCCCG CAAAAATGCTTGTTGGGGAGCTCCCCAAACCCGCTGTACTTCGGGACAAATTGTCCCAAA GTCCCGGTGCGCTGCACCGTAGTCTGCGGCCCGTCACTATCGTTCCTGGGCCTTATTTTC ACGCTCGTCTGTTATGCCGAGCAGATGATCAATGTTCGCTTTTATTGCCACAGCCTCCCG CATTTGCCGCTGGGCATCCCGGTATTCTGCATAAAGCTCTTTCTTTTGTCCCGCCAGCTC ACGGCAGGATTTTTTTAGTGCTTCAATCTTAGGGAGCTTTGCGCCGTTCAGTATGGTGTT CATGGTATCCTTTGCCGCCCGGTAAGTGGCAAGCTCCACTTCATGCTGGGCCAGATACTT TTTGCTGTACCGCGCAGCCTTGTACCCATCGAATACCGGGCGGGTCTTGGCATAGTCCAC CGTGGCAGCCATCAGCTCCGAGGTTTTGGAAAGAGCCTCCTCCGTTGTGCGGAGCTCGTC AGACAGCTTGTGAAAGTGATCCACAGCAGCCTCGGTGCTGGCCGTCAGCGCCGCATAGTC TGTCAGATGATGCTCCTGCAAATACTGGAGCGCGGCAGCCATCTGTTTTAGGTTGTAGAC CTTGGCCCATCGTTCATAGGCCGGGCCCTTGCCCTGGGTCATACGCTCTTGAATGTCGAT GATGAGATTAACTCGCCGTGGCGGAACCGTGGGCTCCTCTGTCAGCTCAGGGAGTGGACG TTCCCCGGCAATTACTGCCTTGATGTCCTCCGGGTCAAATCCGGCTCCCAGTGTAGAAGC CCGGAGCCGAGTCGGTTTTTCCTGCCCGGGCGCAAGGAATGAGATGACACCGCCGCGTCC CTGTTTCACCGAAAAGCCGGACTCCTCCATGAGACGAAGAAAGTCGGCAAAGTCCGTGGG CTTTTTCTCCAAAGTGGCGAGAACAGCCAGCCGCACCCGCTGCTTGGCAGAGGGTGGCTT TTCTCCGATCCACTGTCCATAGTGGAGAAAACGACCCTTGCTGTGCTGGCACGGATTTTG GATAACAGACAATTCATGTTCGATGCACACGCGGTCAGAGAGCCTCCGCAGGGCAAAGGA CGAACCAATGAAATTATGAAATTTCCGGGAGCGGTCAAAGGCCGTCGCATTGAAATAAAT GTGATTGTGGATATGGGCCTTGTCGGTATGCGTACAGACGAAGAACTGATACTTTCCCTT TGTCCAGCGCATCGCCGTTTCATAGCCGATACGGTTTGCTTCTTCCGCCGTAACCTCCCC GGGCAGGAACGCCTGCCGGATCTGAAAGAACAGGGCCCCGCGAGACACGGCCCGGCCTGT CTCTGCAAGGTATTGACTTTTTACCAGAAGAAACTCGGCGGGAGCCGTGTTCGGATCGCA GAGATAGGAAGATACGGCTCCCAGCTTTTCTGGGTTCAGGCCATAGGTGAAACGATCCTC CATCGTTTGAATTGCACTTTTTCCCGCCGCTGTTTTATAAGGGCGGATGTAGGTGGTCGC CGTAAAAATCCCTCCTTCCGGCAAACAGTATTTTTACTTTGGGACACTTTGTCCCGAAGT AGAAAAAGCCGGGGAGCGGTATCAACCACTCCCCGGATGGGTCAGAGCTCTACCAGCGCG GAGAGCTGTTTCAAGAGATCAGACAGCGGCTCCCACAAAGCGGCATAGTCCCGCTGCAAG GCCTCGAGTTCTTCGGGATAAATCGCGCCGTAGGTGTTGGCTTGAATTGCCACTTGGTTC AGATTGTTGGAGCAGCGCCGCTGGAGCGAAACCAGCTCACGAACAGGCGAAAGGTCAACA TGAAGCACATACCCACTCAGGGCCATTTTCCGCATATAGGCTCCCATATTACGGATGCCA GCCTCCGCCATACGTTCTTGAATCAGGGCCTGTTCCGCCTCCGACACCATCACATGAAGA TGAATCGGACGGCGGCGGTTCTTTGTCATCGTTCCTCACGCTCCCGGCTGCGGCAGGCGC GGGGCGGCTCCTTTACCTTATCCAGCGGCTTTTCCTGTTCGTCTGCCGGAATGGGGCGCG GCAAATGAAATTCACGGTGCAGGCGCAGCGCCTCCAGTACAGACAAATCCTGTTCACGTT TCTTTTCCATATACGCACCTCCTTATCTATCGTCACGGTCAGGCTGCCTGCGCTGGGGAG CCGGAGCCTCCGGGCCGCGATCTGCCTCCGCCAACTTTGCCGCGTTTTTCATCTGCTCGG CAATCGGACGGGGCCTGTCGGGATTATCAGGCGCAGGACGCAGCTCATAGTCGGATGCCT GTTTTTCTGTCAGGGGGCGGGTATAGGTAAGATAACCCCAAGCCAAGAACGAGCCATTTT CCACCGGGACGCGCTGATCGTAATTGAAAATTTCATCCGGCTTGTTATAGGGCGGCTTCG GGAATGTCCCGATGTCCACAGGCCGCTGGGTCGAATAATACTTGTAAAGACCGGGAGCCT CGGTCTGCCTGATCCCCACGTTATAAATACGCTGATAGTCCTGCACCCGGTCTGTAAAAT CCTGTTCCATCGCGGTGCGGTCATTTCCATAGTGACCCCATTCGTACTGCCGCAGGCCGT CTTTGTCATCATAGCAGGCCCATGTGACATAGCGGGATGGCGCGGTGGGATGTTCGCCCA ATGCAAATCCACGTCCATTTTCCAGCATAACAGCCTTCAGAATCGAATAGCCTTGATTTT TGTCCATAGTACACCTCCCATCATCGAGACATTTCTTTGTTTTCTCTTTTCACAAACGGC TGGAGCTGATAGGGGCTTGTACCGTCCTCGGGCCGCAGAAAGTCTATCCGGGCCGCAGCA CGGATAGCGTTCTGGTTAAGCTGGCGCTGCCATGCCCCTTGGCTGGGAGCCCACTTAAAG CCGTTGCTTTTCAGTTCCTGCCGCTGATCGGCATCGGGCTTTTCCTCGAAAATAAGCTGC AAACGGTTTTCAGCCTCGTTGATTTTTGCCTCGCCTCCGGGGAATGTCCAGCCTGCAAAC TCGGAGCGGTTGCTCAGTTCCTCAATTCGCTGGCGTACACGGCGGATGTTGGCGTTGTTG TTGGAAAGCAGATAGGCGGGATACGGCTTGCTTTTGTCCAAGTGCCATGACTGCGCCATA TCTGCTTTGAGCTTTTCTGCCTGCTCCGGCGTAAGCTCCGGGCAGCCATCCAGCGTTTTG TGTTTCCGAAAATACGCATTGACCGCCTTCATGGTGGCCTGCTGGGACTCCAGCCCCTCC AGCTTTTTTGTCAGCTTTTCCACGGCCAGATCATCGTCTGCGCTGATCCCGCCCATACCA ACAGAGCGGATTTTATCAAGCAGCTTTGAAATCTCCGCATACTCTCCATAGTTGCGATCC CGGGCGGCGTTCTGCTTGTGCTTTTTTGCCACAGGGAAATTGCCGCCCCCGGAGATCAGA ATAGAGGGCACCCGGGCATCAATCACATTGCGTTCATTCAGATTTTCCGCAAGTTTCCGG GCATAGCGATCCACCAGCGCGTCAATCTTATCATGGTACATTGGATCGACACGGGCTTTC TGGCGTTCCGCCGCTGCATACGCTTCATCGACCATTGCCCGGTAGCCCGCCGTAGCGGAG CCCGGCTGATAGTCGGAAAAGCTGTTCATATCTTTTGCCCGCTTTGCGGCTTCTTCGTTG ATCGGATAATATTTCGGCATAGTACCTCCTTCCACAAAAGCCGGAACTTTGGGACAAATT GTCCCAAAGCTCCGGCAGCTAAAATGTTGACAGCATCTCACGGAAACAGGGCCGGACATA GAAACATACACCTCCCGCAGAAAAGGGCCTTAAAAAGCCTTGTCACAGGCGGGTTTGAGG TGGCCTAATTGTCAACACATCAGCCCCGTTTTTTCCGCATATATTCCCGCTGCTGTCTGC GATGTGCCGCTTTTGCACAGGCCGCCGAACAATAGGTTTGCCGTCCATCAGGAGCCACGG CTCTGCCGCATACCGGGCAAGCCTTGAAATCCGGCCTTGGCCCCTCTGTCAGCAGCGCAA TCTCCAGCGCCGGATCAAGGGGCAGAACTGCCTCGCGGAAGTAGCGGCAATAAGCCCCTG TCCAGCATTTCCCAAACATATAGCACTCGCAATCCAGCGGCAGGCAGCCGCAGTCCCGGT CATAGTTGGCACACCATTTTGACACCAGCCTGCGGATTGTCGCTTTTTCTGTCCGGGTCA GTTCTCGGCCCACAGTATCACCTCCCGTTGCCCGGTGGTTTGAGCTGCTCCCGGTAGCAG AACACGCAGCCGATCCCGCGCCAGTAAGGGCAGCCGTCACAACGGGAGCCCTTCGGCGGC AGGCTTGGCGGCACACCCTTAAAGTAGCTTTTTTCTTTCATAAATCCCTCATAGGGGTTA TTTGTAAATCTCATTCATTATCCTCGCTTTCGGTATCGTCCTCGTCCCAAGGCGGCCCAT TGTCCTCGGGATCGTCATAATCAGCCAGTTCCTCACTGTAATCCTCTTCGGGTACAGCAG CTTTTTCATGCTTCGGGCGGTAGATTTTGAAGTACCAGCCTGCACCGCCGCCCAGAACAG CCACTGCCAAAATCAGCAGAAGCATCCCGGTATTGCTTTTCTGCTGGGGCTCGGGTTCCG GCTCCTCCGCAGGTTCTGTCACCGGGGCGGGTTCGGGAGCCGTGCCAGCACACTCGGTCA TGTTGACCGCGCAGACTTCGCAATCCGTATGGATGGCTCCGGGCGCACATTTTTCTGTGC AGGAGCAGGCCGGAAGTTCTCCGCCAGCGGCCTCCAGTGCCGCCAGCAGATCGGCTTCAT CCACCATGTTCAGAAAGTAGGTGTGATACTGTTCGCCGTCCTCATCCACAGGCTTGTCAT AGTCAATGACAATGTAAAAGGTGTTGCCGCCGCTGGTTTCCACCGTGATGAACTGTTTGT TGGTTGCGGCATCGTAGAGCAGATCGCGGGTCACAAGGTTTCCATCCTCCGAAAAGCCCT CGCCCGGGGTAATGGTAGGCGCTGGCTCCGGGGCCGGAGTTTCTTCCACAACAGGCGGTT CCTCATTCCCGCCGTCCGAATAGGCGTAGGCTGGGATCGCAAAGCCGCATAAAAGAACGG CGGAGCAAAGCCCCGCCGCCAACATACGAAAATGTTTCATATTCAGTTTTCCTCCTTCTT TTTTTCTTCGGACTTCGGGACACTTTGTCCCAAAGTACCGCCGTCCTTCAGCTTCTCAAA CAGCAGCGGGAGCTCCGTAAGGGAAATGCTCATGCCGCGCACAATGTCCACGATCTCGCT GTTTTCTGCCTCCAGCTTTTTCTGTTCCAGTTCCTTGAGCCTGGCCTGCTGTTCACTGAT TTTGGCCTTGACCTTATCAATCTCGGCCTGAATTTTCATGCTTTTGGTAGTTGCCATTTC AAAACCTCCTGTCACGGTAAACGCCCGTAGGCGTAAAAATGAGATTGCCAGTAGCTTGTA TTCAAGTTTGCGTAGCCGATGGGATCTCCGCAATGCAGCATTTTTCCATCACCGACATAA ATCCCGCAATGGCTCACGCCCGGCGTGTCATAGGTGCCTTTGAAGAACACCAGATCACCG GGTTTGGGAGAACTGGTCGGCGTACAGATGTTATAGAGCCCCTGGGCTCCCAGCCTGCCC ACATTCCAGCCGGAGTGATTGATAACCCACGAAACGTACCCCGAGCAATCAAAGGAAGTG GCGGGAGAACTGCCGCCCCACACATAGGGATAGCCGATGTATTTCTGCGCTTCGGCAAGC ATCGCGGCAAAGGTTTCATCGTCCAGATATTCTCCGGGCACTTCGTAATCACCGGGTTTC CCGGTAATGTACTTGTTCACATAGGGAGAATCCGGAAACAGATCAGGACGGTTTCCCAGC GTTGCCATATAGATGGCATACCGGGAAAGCTGATCCTCGCCCATAACGTATACAGGCACA TGGGACAAATCAAAATTTTCCAGCGTGACCGTACAGATGTAATAGTCGTAAGGCACCTGA TAGGTGTCCGTATGGGAGTTGCCGTCCTCGTCCGTCCATGTGTCGGTTTCCGTGCGATAC CGGGTTTCCACCACCACATCCTCCGTTAGAATGTACTGGCGGTCAAACAGCATTTGCAGC GTTCCCTGTACTTCGTCTATTGTCCATTGCCCCTCATGGAGCGCACACAAAAGAGAAAGC AGCACATAGGGGTCATGTTCGATTTCGTCCAGATCGAAGTGGTATTCGTCATAGTCATGG GTGCTTTCATAGGTGTCCAGATAATGCTGCAAATCATCTTCCAGCGCACAGTAGGCAGCT TCGGCGGCCAGCATATCCCGATCCTCACAAGGATAGGTGCTCGCCCCTAATGCACCGGCC CCGGCGTTCCCCAGCATAAGCATGGTAGAGGAACAGGACTGCATAGCAAACAGGAGTAAC ACACAGAGCACCGCAACCACGGCACCTGCGGGATGACTTTTGACAAATTCCACTGCCCGG GCGGTCAGGCGTTCTGTGGCTGTGGCAGTTTTCCCAGCCGCAGCCGCGCTCTGCTTTGCA GCCTCCTTTGCCTGCTTGCGGTATTGCCTGCGGAGCCGTTGCTTCTGCCAGTAGCGGGTA AGGGCATTTTTCGTCAGCTCCGGGTGCTCCTGTGCGGCGGTGTGAAAATGGTAATCCGCC GTGTATTTGGTATAGCGGGCCTCGGCCTTGCGTACCACTTTTGCCGGATGTTCCCGGACT TTACGGCGCACAAAGCGGGAGCCGTGCCGCAGCGCGGTTTCTCCCGCAAGCTCAGAACGG TGTGCGCCTTCTGTGCCGACATTTTCCTGTTCCACTTCAAAAATCTTGCCATGCACGAAG CTGTGAACGGAACCACTGGCAACACGGCCTATGCGTTTTACCGGGCCGGGCTTTTTCGGC GGCTTTTGTTTTGCCAGCTTCTCCCGGGCCTGTTCCAGCTTTTCGCCTTGGGACTCCATA CGGAGCTTTGCTGCCGCAGCCTGTTCTTGCTGGCTCTTTTTGCGGAACTTGGACTTTGGG ACACTTTGTCCCGAAGTGTCGGAAGCCTCCGGCCCGGACTGCTCCCCGTCAGGGGCGTGG GCGGTCTGCGACCAAGCCTCCTCCTTGGCCTTATTCGTTTTTCGTTTCATTCTTCATATC CTCCGGGCGGGTAGTCAGCAGGTCATAGATTTCTCCGCGAGGGAACCGATCCACAAACGG GATGGTCACATTTCCATAGAACAACAGCCCCTCGCCGGAATTGCTGTGTGTGATATAGGA AAGCTGATGCTCGGAAATACCGAGCTGTTTTGCCAGAATGGTACGGTCACTCTGCGCCTG CGAAAGCAGAATCATAAAATCCGTGTTGTCCAGAATGTTCTCGATTTCCCGGCTGGCCAA AAGGTCTTTGACGTTCTGCGTCAAAGCAGACGGCACACATCCTTTTTTACGCAGCATTTT CCAGACTGCCACAAAGTAGCTGGCTGTCAGCGGATCGCGGAGCAGAATATGAAACTCGTC AAAGTAGCACCAAGTCGCCGCACCCTCGTGGAAGTTCTGATCCACCGCCTGCGAAACGAA CTCATTTGTGATGTGCATTGCAATCTTTCTAAGGTTTTCGCCCATGTTTTTCAGAACGAT GCACACCACACGGCTGTCCGTCTTGACGTTGGTAGGATGGTTAAAGAGATTGAGGGAGCC TGTGCAATAAAGCTCTAAGGCAGTTGCCACGCGCCGGGCTTCGGGCTCCGGCTGGCGTAA GAGCTCTTCGTACAAATCCTGCAACAGCGGTGTTTTTGCAGTTTCCAGTCCGAGCGCCTG TTCCCGGTACACCAAACGCACACAGCGGTCAATGACCGTCTTTTCAATGGGCTGCAAGCC TTCCTTGCCGCCGACCACCAGCTCGCATAGGGACAAAAGAAAATCCGCCTTCATGGAAAG CGGGCTTTCTCCGGCGGCCATATTGAGCTCCACATCCATCGGATTGAGGTGGTGCGGGCT GTCCGGGGCAATCTCGATCACCTGGCCGCCCAGCCTTCGCACCAGCGGAGCGTATTCGCC CATCGGGTCAACCACGATGATCCGATCCTGCGGGATGGTGAGAAACACATTCAAGAGCTC ACGCTTTGCAGCAAAGCTCTTGCCGGAGCCCGTAGAACCCAAATACATCCCGTTTGCCGA CTTCAGCTTTTTGCGGTCAGCCATGATGACATTGTGAGAAAGTGCGTTCATGCCATAGTA GAGTGCCTGCCCCGCCATGCGGAGCTCCCTTGTCATAAAGGGGATAAAGATGGCTGTGGA GCTGGTTGTCATACCGCGCTGGATTTCTACCTCGTTGTAACCAAGGGCCAACGAGGAAAC AAAGCCCTGTTCCTGTTGCCAGTCCAGACGGCGCAGAGCGCAGTTGTATTTCTGCGCGAT ACCGCCCACGGTAAACACATCGTTTTCCAGCCGCTGGCGGGTAGGGGCAAGGTTTACCAC CGTAAAGGTCAGCAGAAACATTCGCTCATTGCGGGATTGCAAATCAGCCAGAAGCTCCGC TGCGTCCTTGCTGAATGTAATCAGGTCAGGGGGAAGAATATCCGGGTCATAGCCGGAGCG CACAGCCTTTCTCTGTTCCTCCACTTTCATTTTTCCGATGTCCGAGATTTTCCCCTTGAT GGTCTTAATTGCCTTGAGCTGATCCACGGTCTGAATGTGCATGGTCACGGTCATTTCCGC ATCCAGCTCCAAGATTTCTGCCAGCAGCTTATCCGAAAGCTCCGATGCCATAATCTGCAA GTAGGACACCGCGCCCCAATACTGGCCGATGCGGAATGTGCGGGACTGGCGGAAGTCGAG ACTGTCCGGGGCAATAAAGTCTTTTGTGCCAAGCCCGGTCTGTGGGATGTCTTTCCACGA AAAGCGGAACGCCTCGCGGCTCCCCGGATGCATCTGGCTATGAAGCAGCGCAAGGCGGGC CCGCCCGTCCATAGGCTCCGAGGGAACGCCCAGCCGCTTAAAGTTTCCCATGACATCAGC CTCCACACGCTCCAGACGGGGCCGTGCCTCCGCAATCCCCTCGGCGGGTATGCCAAAGGT GATGTATTTTGAGCGTTCAATGCCGTTATTGCTTTTGGCAATCTGATTTTTCAGCATCCC GGTAAACTCGTCCCGGACGCTGTTATAGTTGTCATCCGCTTTCGGGATATTGACCTGATA GCGGCTGCGGGAATGAGAACGGCGGTTGATAAAGGAAAGCTGGAACGGCAGCGAACTGTC AAAGTAGTTGAGAAATGAACTCCATCCGCTGAATATGGCAGTCTGATCCTCGGTGGATGC CACGGAGTAATTGATGTCCTCATATTCCACGGTTTTTGTATAGAGCCCGCCCGGGAGCTT GCACACACCGTCCGGGTGCATGGACAGATACGGGATTGTCTGCTGAGCAGACAGGGTCGC CCGGCCTTTACCCTTGGCGGCGGCTCCGTTTTTCTTCTTTGTGTTTTTCAATCACATCCT CCTTTCCAGCGCCCGGCCCGGCAAAGGGCGCATAAATGTTTTCGGTTCGGTAGGCCCTGA TCCCCGGCCTTAGAAACTTGGCCCGGATGATGTTTCGCACAACCTTTTCAAAGGGCAAGC CGTCCTTTTCATACATCGCCAGTAGGAACGCCGGGAGCATAATTCCCAGCATGAGAAACA TCGCCCCGGTATTGCCGAGGGTGCCACGGGTCAGCAGATAGGCCGGAATCCCCACTGCGC CCGCGCTGCCGAAGCAGACAAGCTGGCGTTTGGTGAGGTTGAAAGCCATCTTTGTTTTGA TTTTGGATAAATCGTTTGGTACGTTTACATAGGGCATAGATCACACTCCTTTCTGCACTT CGGGACAATGTGTCCCAAAGTCCGGGATGGTTGGTGTTACTTCATTTCCCCATACAGCCC AGCCGGGCGGGGTCTGCCTGGCAAAGAGCTCCACGCGGGGCAGATCGCCCATCAGGGAAA TGATTTTGGCGCGGGCCTCGTCCGGCTTTTTGCTATGGGCTTCAATCGGGGAAATGATGA ATTGATGAATGTTGGCAGCCTGCCGCTTTGGATGTCCCTTGGTTGCCAGCAGGCAGATTT CTGCATTGCCCCTTGTCCAGAAGCCAAGGCCGTAAAACCAGCTATCCGCCTTCTTGTTCT TTTTCAGCCAGACGAAAGCGACGCTTTTGTAGGTGAAGCCCCAAGCCTCGATCAGCCGGA GCGCCTCCGGGAGCTGCGGGAAAGTAGCCCATAAAAAGAGTGCGCTGTCCGGGGCTGCAA GATCAGCCACAGGCAACGCACATAACTCCTCAATGCTCATAGTGGGATAATGGTTTTCCG CCGCGCCCTGTACTTTCTTAGCCGAGTAGCGCCACGGCGGGTCAGCGTAAATGATAGAAT ACTGCTGGATAATTACACTCCTTTCTCGCCAGAGCTTTTTACTGCCTGCGCCGCACGAAT ACGCTCACTGGCTGCGGCATAAAAGGCCGGGGCCGTTTCAAAGCATACAAAGCGACGTTC TGTGTTGATGGCTGCAATCGCGGTTGTGCCGGAGCCCGCGCAAATGTCCGCGACCAATTC GCCGGGACGGGTATAGGTGCGGATCAAATACTCGCAGAGCTCCACGGGCTTCTGTGTGGG ATGGATGCCGCCGGACACCGTAGGCACAAAAAGCACATTTCCGGGATAGCGGCGGCCATC GTTGGACTCTGAGCCCTGCCGTTCAAATTTCCCATAGTTAGAGCTTGTACCGCTTCGGGA ATGAACACGGGTATATGGCTTGCCGTAAGTAAACTGTGGATTGTAGACCGGGGACTTTTG GTAAAACACCAAGATGTTCTCGGACTTTTTCAGCGGAGCCCGGTTTGCATTGAGAAAGCC CGTTCCGCGCTCTTTGTACCAAATCCACTCATAGCGGAGCATGGCGAGGTTGGATGCGCC CAGCACCTTGTCAAAGGGGCACTGTGCGAAGAACAGCACCGCGCCATTCGGCTTGACCGC CCATTTCACCGCCTCCCACAGTTCCGGGAGCGGCAGGGGCACATCCCAATAATTCCGGGT TGTGCCGTAAGGCGGATCAGTCAACAGCATATCCACGCTATGTTTGGGCAGGGAGCGCAG GCCCTCGATGCCGTCCATGAGAAACAAGCCCTCCTTCGGGACACTTTGTCCCAAAGTGCG GCTATCGGTCATTGCGGGCCTCCTTTGCTTTGGCAGGTGCAGGCCGGGCGGCATTTTCTT TTCCAGCTTGTTTCGCGGCCTCGGCCATCTGCTCCTTGATCGGGGCAGGCCGTACCGCCT GGGCCCGTGCAACAAGCTGTTCCACCGCCGCATGATACGCCTCCACACCAGCCGCATTGA TCCGCTCCTGTGTGGCGCGGTCAGGAATCCGAACCGTAGCCCGGTATCCCGTCCGGCTGG CAGGATCGGGTTTAGAGGGAGCTCCGAGAAAAATTCCGTTTTTCCCGTCCACAACCTTAA AATCGTCGATGACCACACCGCCAAAATTGACGCTGGCGAAGCCGATCAGTTTACCCTGCG GCTCAATCGGGCGGACAGATACTGTGATCGGAACAACCGCCTCTTGCAAGACGGCATCCG TCCGCATTTTTACCGCCTCGTCAATACTAACGCCCTTGACTTCTGCAAGCTCCGCGATGG GAGCATCAAACAGCCAGCGCCGCTCCTCCGCAGCAATCTGCTCCGGGGTCAGCAATACAT CGTCGTTCTTACTCAGATAAAATTCCTCCTTTCCGCTTGCCGGAGCAGGCTGGGCGGGGT CGTCCATCAATTCTTTTCTTTGCAGGACGGCCTCTGTTTCCGCCATAAAGCGGTAAGCAT CCGCCTCAGTAAACTCCTCCGGCGTTTTTCCATTCCATAAGCGCGTTCCGTCTGCCCCGT ATCTTCGCGGCATAAGCACCACCTCCTGTTAATGAGCGCCAAAGATACGCTGGGCAATGC TCCCGGTCTTAAAGAGCATGAAGCAAAGCAGAACCGTGTAGCCCACAGTTCCCCAAATCG CCCCAATGGGATCGCCGCTTGTTGCGATGCCTTGAATGAGCACCGCGTAAATTGCAACAC ATACAAGAATCAGCAGCCCTTGAAAGCCCACGGCAAACAGGGACTTGATGTAGTTCTGTC CGGTGCCACCAAGCTCCCGGTTGGAAAGCGTAGCAACGGGGATGGGGGCCAGACTGGTCA GCAGTAGGGTAAGAACCCGACGCCTTACCATATCACTATGGCAGGTTTCCGAGAACTCCC CTCCGAACCGGACTTACACCTCTCGATGTATCCGGCTCTCCAGATGTCAGTCTAATTTCC CTACGTGTAACTTATCGTGACAGTCAATGCAGAGTGCCATTGTCTTGCGTCTGCGCCCAA TCATGGCGATTTCCCATTGTTTCCTGCCACTCAAATCCTTGAGTTTTCGTACATGGTGTA TCTCAAGCGGCACATTCTCTGTGCCGCACCACTCGCATTTGTTCGCTTGTAGCCTTTTAA TCAGGCTGTTGCGCCCGTAGTTCTCAACCACTCTTGCCACTATGTCGGGGTTGCCGCTTT CGACTTTGGTATTCCGGCGGAACCCATTATTGTAGAACAGCACTTTACCCACTTTGCCAT TTTTCTTCGGATACTCCACAACAAAGTCTTTTCCTTGACGGTACTTGCGAATAATTCTGC TAATTCGTGTCCGATATTTTCCGGCGAAAGTTTTGAGCATACTGTATCTCATTACATAGT AGAAGTTGTTGAGTACGGTCACGTTGTTTGCGAGCCGGTAGTAGTTGTATAATCCACGGA TTTCTGCGTTGTACTGGTTTAGGATTTCCAGGTCGTCCAGGTGCAACAGGCGGGTGCGCC GGACAGGTTCCCAAACCTCTTTGTTTCCGTTCTGTTTGTCGTATTTAATTTTGAGGGCAT TGTAGGAGAGCAGGCGTTTTACCCATTTATCATGGGGAACATAGAGCAAGACTTTTCCGT TGTTCACTCGTCTGGTAGCCCCGGTTTTGGTCTTTTTGCTGTACTCGCCCTTGGCGATTG TGACCTCGTATCCCAGAAACTTTGCAAAATCATGTCCGTGGGTAATCAGAGTCTTTTCCC CGGACATTTCCAGATGAAGTTTTTCCCGGATAAAACAGCCTACTTCTTGTTTTACCTGTT CTGCGTCCTCTTTACTGCCGATAACTCCTATCAGAAAATCATCCGCATACCGGACGTAGC AAATCCTCTTATAGCTGTCGTCCATCTGGTCACTGTATGGCATGGATTTCAGACTGCGCC GCAGTTCCCGGATTTCCGCAATTAAGCCCTCTTTTTCTTTCTCGCTCATTTTAGAGAGAT TTCTTTTAAGCCGTTGCTCTTTTCCCCGGCAAACATCCAACTTCTTCTTGAACGCAGGAT TGATTTTACGGCGGTTTCCGCAGTTGAACTTCTCTGCGTATTCTGCCATATAGTTGTCCA GTTCGTTCATATAGATATTTGCAAGGATGGGGCTGATGATAGAGCCTTGGGGAGTGCCGG AGTAGGTATTGTGATAATTCCAGTCCTCCATATATCCGGCTTTCAGAAACTTCCATAGCA GACCAATGAAATGTTCGTCTGCAATCCGCTTCCGCAGAATGTCAATCAGCACATGATGGT CTACATTGTCAAAACAGCCCTTTATATCCCCCTCAACGAACCACTTTGTCCCCGTAAAAT ATTTCTGTACATATTTGAGTGCCGTATGGCAGCTTTTGTTTATGCGGAAACCGTGGGAGT AGTCGCTGAAAGTTGGCTCATAGATGCTCTCTAAGATGAGCCGCACCACCTCCTGTATCA GTTTATCGTCGAATGACAGTATCCCCAGAGGGCGCATTTTCCCATTGGATTTCGGGATAT ACGTTCTCCTCGCCGGGTTGGGCTGGTAGCTGAAATCACGCATTTTTTCAATGAGGGCGT TTATCCTTGCCATTCCCATACCGTCAATGGTTTTGCCGTCTGTTCCGGCTGTCATGTTGC CTGGTTTCGCCTGTATCCGCTGGTATGCCAGCAGATAGAATTGTGGATTGTACAGATTGC GGTATAACCGCTCGTACTTGTAACTCTTATTACACGCCTTGGATTTTAGGCTTTCCAACA CATTTTCAGGACTTCTCATAATGCCTCACGCACCTTTCCTTTTTATGAATTGGTTGACAT CCTGCCTCCCTTCGCCATGTAGACGGCTTTCCCGCCCTCGGACTACTACGGAGGCTCCGT TGCCATGCCGGATATTCAGCGTCATCTTTCTTGGGTTTTTACCCCTTGAAATTTTTCACC TTGCGGCATTACGCATAGCCGGATAATCCCGGCACTCCGGTTTAGGCAATCTCCAGTTAG ACACCTTGGGAAAAGCGTATTGTGATGTCGGTAATGGGTTTTCGTCCTTTTCCGCTTATT GCGGCTGGCTGTCATAAGTATCGTGCGGTCTGTGTCTACCTGTCACATTCTGCTATGACA TACGGCGAATACAACCATCCTGCGCCGCCGGGTCGAGTATCCCGCCTCGGACTGCCCTTA AAGCAGTTTAGCCTTGTTCCTCATTCACAATGTTGCGTCTTGCCGCTCAGTCGTGGGTAG ATGGTTTCCCCAACTTGCGATTTTTTCGGTACGCTATTGTCCCCCTTGTGGTTTCCCTCC GGGGTAAACCGAATGACGCTAAAGTGACATTTTTCACGTCTTTGATACTTTTCTTTACCG GCTTGCCAAAGCCGGATTCCCAAAATGCCCGCGCACCGCTTTCGGATGAAAAGCGGCGCT TCTGGACGCGCGATAGATTTCCAGCATCCTGCCATACACCAAAACGAAAATGATAATTCC CATCGCCTTCATCGTGAAGCCAATGAGCGCAGACTGCAGCCACAGCCCCAAAAGCGGCCC CAAGTCCATCGCCTCCAGTGAGGTTTCCAGTTCAGCAAGCATATCCGCCGAAACATCGGT AGAGCCTTGAATGAGCCCGCCTGCCTGCGCGATGACGCTCTGCGAGACATCGAACACGGC CATGACGATATTGAATGTATTTGACAGGATTAAGATTGCACAGGCTGTTTTGAACATCCA TTTATAGAGGTTCGCAACGTCAACCTCGTGCATATTGTTCTTTTCCAAAAGCATCTGTAT GAGCTCATAAGTGGCAACAAAGGTCAGCACCATTCCGGCAATCGGCAGGATCACCGTTTC GGAAAGCTGTCGGATCAGGGAGAAAACCCCGGCGTGCCAAGCCGCCGGGGTAGTCCCTAC CTGTGCCGCAATCTCTCCGACTTGGGTATTGACAGTATCAAAAAGCCCTTCGAGGTTCCC CATGATCCCGCCAATCAGAAGCTCTTTGATCCAGTTTGTGAGCCAGTCGGTGAGAAAATC CATAAGCGCCTACCTTAAAACAGGCCAGACAGCAGAGGGATCAGTGTGGTGCCAATGACG ATGATGCCGCCGCCCGCCATGAGCTGCTTCATGCCCTGGGACTTTGCTTATGTGTGATAA AGAAGTAATAGAAGTGTAAAAAATTTTGCCGTTCCTATCCGGCACATGAGGTATGTCGGA TAGGTCGGGCGGTTAGGTGTCGGGCAGTTCTACCTTGCCGACAAAAGAATAATAGATTTC GATTTCCTGTCTGCGTAACTTGCCCCGGCGTTTCCCGTCAAGGGCAACGCTTTCATGGAC AACGATTTTCTCCACAAACTCCCGCAGCAGAGTAGGGGTAAGTTCTTCAATGGTAGTGTG CCTGCGTACCACATTCATAAACTTTTCAGCGTTTGCGGTGGCTTCCTGCGCTTTGGAAAG TTCTTCCCGCAGTCTGGCGGCACGTTCTTTCAGTTCTTTCTGCTCGGCTTCATAGTCTGC CGACAGCTCTGTGAAACGCTCGTCCGATATGCGCCCGGTTACGCTGTCCTCATACAGCCG CTTGAAGATAGCAGATAACTCGGCTATGCGTTTCTCGGCGGCTTCCAGCTCCTTTTTCTT GGCGGCGTTCCTGCGTCTGTCCCCGTCCTCATTCTGCTCGATTAAAAGCTTCATAAACCG GGCTTCATGCTTTGCCGCATAGCTGGTAACTTTCCGCAGATTGGAGAGTACGCCAGCGGT CAAGAGGTCAGTGCGGATAAAGTGCGCTGTGCAGTCGGCGGTGCGTTTCTTGTAGCTTCC GCAGATATAACAGTCCTGCTTGCGCTTGTCCGTCTGGTATCGCTGCTGGTACATGACGCT GCCGCAGTCGGCACAAAAGAGTATGCCGGAGAACAAGCCCACTTCGTCATAACGGTTGGG GCGTTTGCGCTGCTTGCGTAACTCCTGCACCCGTTCCCACGTTTCCCGGTCAATGATAGG CTCATGGTGGTTCTCAAAAACCGCCTGCTTTTCCGGGGGATTTTCTATGCTGTGTTTCAG CTTGTAGGACGGCTTCTCGGTCTTAAAGTTTACCAGACAGCCCGTATATTCCCGGTTTTC CAGCAGATGAACCACGGTATTGGTCGCCCACTTGCACTCATAGCCGGGGTGGTAGCGGCG GGTGCTGCCCGTCCTGCGGTATTCCAGCGTCCCCGGCGTGGGGATTTGCTGCTCGGTCAG CATACGGGCTATCTTGGTCGGACCGTTCCCGGCAAGGCAAAGGCTGTAAATCTGCCGTAC CACCGGGGCGGCTTCCTCGTCAATGATAAAGTTTTCGTCCTCGTCCATGAGGTAGCCATA GACGGGCTTGCTTGTGATGGGCTTTCCGCTCATGCCCTTAGAGCGTTTTACTGCCTTGAT TTTCTTGCTCGTATCTCTCACCAGCCATTCGTTAAAAATGTTCCGCAGCGGGGCAAAATC ATTTTCCCCCTGTGCGCTGTCCACTCCGTCATTGATAGCGATGAAGCGGACACCTTTCTG TGGGAAAATCATTTCTGTGTACATTCCCACCTGTAAGTAGTTTCGCCCTAACCTCGACAT ATCCTTGACGATAACTGTCCCGACTTTCCCTGCTTCAATGTCTGCAAGCATGGCTTGAAA TCCGGGTCTTTGAAAGTTCGCACCGGAATAACCGTCGTCGGTGTACCAGCGCAGATTAGA AAATCCATTCTGTTTGGCATAGGTTTCCAAAATCCTCTTTTGGTTGGAAATGGAATTGCT CTCGCCTTGCAGCTCGTCCTCATGGGACAGTCTTGGGTAAAGGGCGGTAATGAGTTGCTG GGTGGTCTGTCTTAACAT
Region | 1 |
Region Length | 19Kb |
Completeness(score) | incomplete(40) |
Specific Keyword | tail,lysis,recombinase |
Region Position | 15304-34401 |
# tRNA | 0 |
# Total Proteins | 11 |
# Phage Hit Proteins | 7 |
# Hypothetical Proteins | 3 |
Phage + Hypothetical Protein % | 90.9% |
# Bacterial Proteins | 1 |
Attachment Site | yes |
# Phage Species | 7 |
Most Common Phage Name(hit genes count) | PHAGE_Bacill_WBeta_NC_007734(1) PHAGE_Entero_Tyrion_NC_031077(1) PHAGE_Deep_s_D6E_NC_019544(1) PHAGE_Bacill_Fah_NC_007814(1) PHAGE_Bacill_Gamma_NC_007458(1) PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1) PHAGE_Vibrio_VHML_NC_004456(1) PHAGE_Bacill_BalMu_1_NC_030945(1) PHAGE_Pseudo_phi3_NC_030940(1) PHAGE_Clostr_phiCPV4_NC_018083(1) PHAGE_Geobac_GBK2_NC_023612(1) PHAGE_Burkho_Bcep1_NC_005263(1) PHAGE_Bacill_phBC6A51_NC_004820(1) PHAGE_Clostr_phiCDHM19_NC_028996(1) PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1) PHAGE_Bacill_SPO1_NC_011421(1) PHAGE_Vibrio_12B3_NC_021067(1) PHAGE_Burkho_BcepNY3_NC_009604(1) PHAGE_Synech_S_CAM7_NC_031927(1) PHAGE_Bacill_G_NC_023719(1) PHAGE_Bacill_CampHawk_NC_022761(1) PHAGE_Clostr_phiCD506_NC_028838(1) PHAGE_Salmon_epsilon15_NC_004775(1) PHAGE_Clostr_phiCD481_1_NC_028951(1) |
First Most Common Phage # | 1 |
First Most Common Phage % | 9.09% |
GC % | 52.63% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
Questionable (score 70-90)
Incomplete (score < 70)
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Score: | The score of the region based on the above criteria. |
# Total Proteins: | The number of ORFs present in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NZ_QUFM01000007.1| Roseburia sp. AF25-18LB AF25-18LB.Scaf7, whole genome shotgun 130249, gc%: 43.66%
Download details as .txt file: detail.txt file_download
Hits against Bacterial Database or GenBank File
Region 1, total 13 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | 15304..15315 | attL | 0.0 | Showinfo_outline |
2 | complement(22635..24353) | PHAGE_Bacill_CampHawk_NC_022761: tail protein; DWY43_RS10125; phage(gi557478849) | 6.94e-14 | Showinfo_outline |
3 | complement(24334..26604) | PHAGE_Bacill_G_NC_023719: gp155; DWY43_RS10130; phage(gi593777612) | 2.25e-07 | Showinfo_outline |
4 | complement(26651..27040) | PrgI family protein; DWY43_RS10135 | 0.0 | Showinfo_outline |
5 | complement(27044..27598) | PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: methyltransferase; DWY43_RS10140; phage(gi971749648) | 1.48e-75 | Showinfo_outline |
6 | complement(27616..28395) | PHAGE_Geobac_GBK2_NC_023612: DNA methylase; DWY43_RS10145; phage(gi589893811) | 3.73e-70 | Showinfo_outline |
7 | complement(28385..29116) | PHAGE_Clostr_phiCPV4_NC_018083: putative SpoVG protein; DWY43_RS10150; phage(gi392972676) | 5.95e-05 | Showinfo_outline |
8 | complement(29132..29434) | hypothetical protein; DWY43_RS10155 | 0.0 | Showinfo_outline |
9 | complement(29510..31342) | PHAGE_Pseudo_phi3_NC_030940: protector from prophage-induced early lysis; DWY43_RS10160; phage(gi100001) | 3.31e-33 | Showinfo_outline |
10 | complement(31918..32586) | hypothetical protein; DWY43_RS10165 | 0.0 | Showinfo_outline |
11 | 32574..32585 | attR | 0.0 | Showinfo_outline |
12 | complement(32598..32750) | hypothetical protein; DWY43_RS10170 | 0.0 | Showinfo_outline |
13 | complement(32776..34401) | PHAGE_Bacill_phBC6A51_NC_004820: Site-specific recombinase; DWY43_RS10175; phage(gi31415812) | 9.82e-32 | Showinfo_outline |
>15304..15315
TGAGAAAATCCA
>complement(22635..24353)
RoseburiaspAF2518LBMKRKTNKAKEEAWSQTAHAPDGEQSGPEASDTSGQSVPKSKFRKKSQQEQAAAAKLRMESQGEKLEQAREKLAKQKPPKKPGPVKRIGRVASGSVHSFVHGKIFEVEQENVGTEGAHRSELAGETALRHGSRFVRRKVREHPAKVVRKAEARYTKYTADYHFHTAAQEHPELTKNALTRYWQKQRLRRQYRKQAKEAAKQSAAAAGKTATATERLTARAVEFVKSHPAGAVVAVLCVLLLFAMQSCSSTMLMLGNAGAGALGASTYPCEDRDMLAAEAAYCALEDDLQHYLDTYESTHDYDEYHFDLDEIEHDPYVLLSLLCALHEGQWTIDEVQGTLQMLFDRQYILTEDVVVETRYRTETDTWTDEDGNSHTDTYQVPYDYYICTVTLENFDLSHVPVYVMGEDQLSRYAIYMATLGNRPDLFPDSPYVNKYITGKPGDYEVPGEYLDDETFAAMLAEAQKYIGYPYVWGGSSPATSFDCSGYVSWVINHSGWNVGRLGAQGLYNICTPTSSPKPGDLVFFKGTYDTPGVSHCGIYVGDGKMLHCGDPIGYANLNTSYWQSHFYAYGRLP
>complement(24334..26604)
RoseburiaspAF2518LBMHPDGVCKLPGGLYTKTVEYEDINYSVASTEDQTAIFSGWSSFLNYFDSSLPFQLSFINRRSHSRSRYQVNIPKADDNYNSVRDEFTGMLKNQIAKSNNGIERSKYITFGIPAEGIAEARPRLERVEADVMGNFKRLGVPSEPMDGRARLALLHSQMHPGSREAFRFSWKDIPQTGLGTKDFIAPDSLDFRQSRTFRIGQYWGAVSYLQIMASELSDKLLAEILELDAEMTVTMHIQTVDQLKAIKTIKGKISDIGKMKVEEQRKAVRSGYDPDILPPDLITFSKDAAELLADLQSRNERMFLLTFTVVNLAPTRQRLENDVFTVGGIAQKYNCALRRLDWQQEQGFVSSLALGYNEVEIQRGMTTSSTAIFIPFMTRELRMAGQALYYGMNALSHNVIMADRKKLKSANGMYLGSTGSGKSFAAKRELLNVFLTIPQDRIIVVDPMGEYAPLVRRLGGQVIEIAPDSPHHLNPMDVELNMAAGESPLSMKADFLLSLCELVVGGKEGLQPIEKTVIDRCVRLVYREQALGLETAKTPLLQDLYEELLRQPEPEARRVATALELYCTGSLNLFNHPTNVKTDSRVVCIVLKNMGENLRKIAMHITNEFVSQAVDQNFHEGAATWCYFDEFHILLRDPLTASYFVAVWKMLRKKGCVPSALTQNVKDLLASREIENILDNTDFMILLSQAQSDRTILAKQLGISEHQLSYITHSNSGEGLLFYGNVTIPFVDRFPRGEIYDLLTTRPEDMKNETKNE
>complement(26651..27040)
RoseburiaspAF2518LBMPYVNVPNDLSKIKTKMAFNLTKRQLVCFGSAGAVGIPAYLLTRGTLGNTGAMFLMLGIMLPAFLLAMYEKDGLPFEKVVRNIIRAKFLRPGIRAYRTENIYAPFAGPGAGKEDVIEKHKEEKRSRRQG
>complement(27044..27598)
RoseburiaspAF2518LBMIYADPPWRYSAKKVQGAAENHYPTMSIEELCALPVADLAAPDSALFLWATFPQLPEALRLIEAWGFTYKSVAFVWLKKNKKADSWFYGLGFWTRGNAEICLLATKGHPKRQAANIHQFIISPIEAHSKKPDEARAKIISLMGDLPRVELFARQTPPGWAVWGNEVTPTIPDFGTHCPEVQKGV
>complement(27616..28395)
RoseburiaspAF2518LBMTDSRTLGQSVPKEGLFLMDGIEGLRSLPKHSVDMLLTDPPYGTTRNYWDVPLPLPELWEAVKWAVKPNGAVLFFAQCPFDKVLGASNLAMLRYEWIWYKERGTGFLNANRAPLKKSENILVFYQKSPVYNPQFTYGKPYTRVHSRSGTSSNYGKFERQGSESNDGRRYPGNVLFVPTVSGGIHPTQKPVELCEYLIRTYTRPGELVADICAGSGTTAIAAINTERRFVCFETAPAFYAAASERIRAAQAVKSSGEKGV
>complement(28385..29116)
RoseburiaspAF2518LBMPRRYGADGTRLWNGKTPEEFTEADAYRFMAETEAVLQRKELMDDPAQPAPASGKEEFYLSKNDDVLLTPEQIAAEERRWLFDAPIAELAEVKGVSIDEAVKMRTDAVLQEAVVPITVSVRPIEPQGKLIGFASVNFGGVVIDDFKVVDGKNGIFLGAPSKPDPASRTGYRATVRIPDRATQERINAAGVEAYHAAVEQLVARAQAVRPAPIKEQMAEAAKQAGKENAARPAPAKAKEARNDR
>complement(29132..29434)
RoseburiaspAF2518LBMVRRRVLTLLLTSLAPIPVATLSNRELGGTGQNYIKSLFAVGFQGLLILVCVAIYAVLIQGIATSGDPIGAIWGTVGYTVLLCFMLFKTGSIAQRIFGAH
>complement(29510..31342)
RoseburiaspAF2518LBMRSPENVLESLKSKACNKSYKYERLYRNLYNPQFYLLAYQRIQAKPGNMTAGTDGKTIDGMGMARINALIEKMRDFSYQPNPARRTYIPKSNGKMRPLGILSFDDKLIQEVVRLILESIYEPTFSDYSHGFRINKSCHTALKYVQKYFTGTKWFVEGDIKGCFDNVDHHVLIDILRKRIADEHFIGLLWKFLKAGYMEDWNYHNTYSGTPQGSIISPILANIYMNELDNYMAEYAEKFNCGNRRKINPAFKKKLDVCRGKEQRLKRNLSKMSEKEKEGLIAEIRELRRSLKSMPYSDQMDDSYKRICYVRYADDFLIGVIGSKEDAEQVKQEVGCFIREKLHLEMSGEKTLITHGHDFAKFLGYEVTIAKGEYSKKTKTGATRRVNNGKVLLYVPHDKWVKRLLSYNALKIKYDKQNGNKEVWEPVRRTRLLHLDDLEILNQYNAEIRGLYNYYRLANNVTVLNNFYYVMRYSMLKTFAGKYRTRISRIIRKYRQGKDFVVEYPKKNGKVGKVLFYNNGFRRNTKVESGNPDIVARVVENYGRNSLIKRLQANKCEWCGTENVPLEIHHVRKLKDLSGRKQWEIAMIGRRRKTMALCIDCHDKLHVGKLD
>complement(31918..32586)
RoseburiaspAF2518LBMDFLTDWLTNWIKELLIGGIMGNLEGLFDTVNTQVGEIAAQVGTTPAAWHAGVFSLIRQLSETVILPIAGMVLTFVATYELIQMLLEKNNMHEVDVANLYKWMFKTACAILILSNTFNIVMAVFDVSQSVIAQAGGLIQGSTDVSADMLAELETSLEAMDLGPLLGLWLQSALIGFTMKAMGIIIFVLVYGRMLEIYRASRSAAFHPKAVRGHFGNPALASR
>32574..32585
TGAGAAAATCCA
>complement(32598..32750)
RoseburiaspAF2518LBMCRIGTAKFFTLLLLLYHTAKSQGMKQLMAGGGIIVIGTTLIPLLSGLF
>complement(32776..34401)
RoseburiaspAF2518LBMLRQTTQQLITALYPRLSHEDELQGESNSISNQKRILETYAKQNGFSNLRWYTDDGYSGANFQRPGFQAMLADIEAGKVGTVIVKDMSRLGRNYLQVGMYTEMIFPQKGVRFIAINDGVDSAQGENDFAPLRNIFNEWLVRDTSKKIKAVKRSKGMSGKPITSKPVYGYLMDEDENFIIDEEAAPVVRQIYSLCLAGNGPTKIARMLTEQQIPTPGTLEYRRTGSTRRYHPGYECKWATNTVVHLLENREYTGCLVNFKTEKPSYKLKHSIENPPEKQAVFENHHEPIIDRETWERVQELRKQRKRPNRYDEVGLFSGILFCADCGSVMYQQRYQTDKRKQDCYICGSYKKRTADCTAHFIRTDLLTAGVLSNLRKVTSYAAKHEARFMKLLIEQNEDGDRRRNAAKKKELEAAEKRIAELSAIFKRLYEDSVTGRISDERFTELSADYEAEQKELKERAARLREELSKAQEATANAEKFMNVVRRHTTIEELTPTLLREFVEKIVVHESVALDGKRRGKLRRQEIEIYYSFVGKVELPDT
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Click on a region in the genome above to show details here.
ORF Start: 15304
ORF Stop: 15315
Strand: Forward
Protein Sequence: TGAGAAAATCCA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
ORF Start: 22635
ORF Stop: 24353
Strand: Backward
Protein Sequence: MKRKTNKAKEEAWSQTAHAPDGEQSGPEASDTSGQSVPKSKFRKKSQQEQAAAAKLRMESQGEKLEQAREKLAKQKPPKKPGPVKRIGRVASGSVHSFVHGKIFEVEQENVGTEGAHRSELAGETALRHGSRFVRRKVREHPAKVVRKAEARYTKYTADYHFHTAAQEHPELTKNALTRYWQKQRLRRQYRKQAKEAAKQSAAAAGKTATATERLTARAVEFVKSHPAGAVVAVLCVLLLFAMQSCSSTMLMLGNAGAGALGASTYPCEDRDMLAAEAAYCALEDDLQHYLDTYESTHDYDEYHFDLDEIEHDPYVLLSLLCALHEGQWTIDEVQGTLQMLFDRQYILTEDVVVETRYRTETDTWTDEDGNSHTDTYQVPYDYYICTVTLENFDLSHVPVYVMGEDQLSRYAIYMATLGNRPDLFPDSPYVNKYITGKPGDYEVPGEYLDDETFAAMLAEAQKYIGYPYVWGGSSPATSFDCSGYVSWVINHSGWNVGRLGAQGLYNICTPTSSPKPGDLVFFKGTYDTPGVSHCGIYVGDGKMLHCGDPIGYANLNTSYWQSHFYAYGRLP
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: DWY43_RS10125, tail protein, phage(gi557478849), PHAGE_Bacill_CampHawk_NC_022761
Homolog/Ortholog E-Value: 6.94e-14
ORF Start: 24334
ORF Stop: 26604
Strand: Backward
Protein Sequence: MHPDGVCKLPGGLYTKTVEYEDINYSVASTEDQTAIFSGWSSFLNYFDSSLPFQLSFINRRSHSRSRYQVNIPKADDNYNSVRDEFTGMLKNQIAKSNNGIERSKYITFGIPAEGIAEARPRLERVEADVMGNFKRLGVPSEPMDGRARLALLHSQMHPGSREAFRFSWKDIPQTGLGTKDFIAPDSLDFRQSRTFRIGQYWGAVSYLQIMASELSDKLLAEILELDAEMTVTMHIQTVDQLKAIKTIKGKISDIGKMKVEEQRKAVRSGYDPDILPPDLITFSKDAAELLADLQSRNERMFLLTFTVVNLAPTRQRLENDVFTVGGIAQKYNCALRRLDWQQEQGFVSSLALGYNEVEIQRGMTTSSTAIFIPFMTRELRMAGQALYYGMNALSHNVIMADRKKLKSANGMYLGSTGSGKSFAAKRELLNVFLTIPQDRIIVVDPMGEYAPLVRRLGGQVIEIAPDSPHHLNPMDVELNMAAGESPLSMKADFLLSLCELVVGGKEGLQPIEKTVIDRCVRLVYREQALGLETAKTPLLQDLYEELLRQPEPEARRVATALELYCTGSLNLFNHPTNVKTDSRVVCIVLKNMGENLRKIAMHITNEFVSQAVDQNFHEGAATWCYFDEFHILLRDPLTASYFVAVWKMLRKKGCVPSALTQNVKDLLASREIENILDNTDFMILLSQAQSDRTILAKQLGISEHQLSYITHSNSGEGLLFYGNVTIPFVDRFPRGEIYDLLTTRPEDMKNETKNE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DWY43_RS10130, gp155, phage(gi593777612), PHAGE_Bacill_G_NC_023719
Homolog/Ortholog E-Value: 2.25e-07
ORF Start: 26651
ORF Stop: 27040
Strand: Backward
Protein Sequence: MPYVNVPNDLSKIKTKMAFNLTKRQLVCFGSAGAVGIPAYLLTRGTLGNTGAMFLMLGIMLPAFLLAMYEKDGLPFEKVVRNIIRAKFLRPGIRAYRTENIYAPFAGPGAGKEDVIEKHKEEKRSRRQG
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DWY43_RS10135, PrgI family protein
Homolog/Ortholog E-Value: N/A
ORF Start: 27044
ORF Stop: 27598
Strand: Backward
Protein Sequence: MIYADPPWRYSAKKVQGAAENHYPTMSIEELCALPVADLAAPDSALFLWATFPQLPEALRLIEAWGFTYKSVAFVWLKKNKKADSWFYGLGFWTRGNAEICLLATKGHPKRQAANIHQFIISPIEAHSKKPDEARAKIISLMGDLPRVELFARQTPPGWAVWGNEVTPTIPDFGTHCPEVQKGV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DWY43_RS10140, methyltransferase, phage(gi971749648), PHAGE_Mannhe_vB_MhS_535AP2_NC_028853
Homolog/Ortholog E-Value: 1.48e-75
ORF Start: 27616
ORF Stop: 28395
Strand: Backward
Protein Sequence: MTDSRTLGQSVPKEGLFLMDGIEGLRSLPKHSVDMLLTDPPYGTTRNYWDVPLPLPELWEAVKWAVKPNGAVLFFAQCPFDKVLGASNLAMLRYEWIWYKERGTGFLNANRAPLKKSENILVFYQKSPVYNPQFTYGKPYTRVHSRSGTSSNYGKFERQGSESNDGRRYPGNVLFVPTVSGGIHPTQKPVELCEYLIRTYTRPGELVADICAGSGTTAIAAINTERRFVCFETAPAFYAAASERIRAAQAVKSSGEKGV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DWY43_RS10145, DNA methylase, phage(gi589893811), PHAGE_Geobac_GBK2_NC_023612
Homolog/Ortholog E-Value: 3.73e-70
ORF Start: 28385
ORF Stop: 29116
Strand: Backward
Protein Sequence: MPRRYGADGTRLWNGKTPEEFTEADAYRFMAETEAVLQRKELMDDPAQPAPASGKEEFYLSKNDDVLLTPEQIAAEERRWLFDAPIAELAEVKGVSIDEAVKMRTDAVLQEAVVPITVSVRPIEPQGKLIGFASVNFGGVVIDDFKVVDGKNGIFLGAPSKPDPASRTGYRATVRIPDRATQERINAAGVEAYHAAVEQLVARAQAVRPAPIKEQMAEAAKQAGKENAARPAPAKAKEARNDR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DWY43_RS10150, putative SpoVG protein, phage(gi392972676), PHAGE_Clostr_phiCPV4_NC_018083
Homolog/Ortholog E-Value: 5.95e-05
ORF Start: 29132
ORF Stop: 29434
Strand: Backward
Protein Sequence: MVRRRVLTLLLTSLAPIPVATLSNRELGGTGQNYIKSLFAVGFQGLLILVCVAIYAVLIQGIATSGDPIGAIWGTVGYTVLLCFMLFKTGSIAQRIFGAH
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DWY43_RS10155, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 29510
ORF Stop: 31342
Strand: Backward
Protein Sequence: MRSPENVLESLKSKACNKSYKYERLYRNLYNPQFYLLAYQRIQAKPGNMTAGTDGKTIDGMGMARINALIEKMRDFSYQPNPARRTYIPKSNGKMRPLGILSFDDKLIQEVVRLILESIYEPTFSDYSHGFRINKSCHTALKYVQKYFTGTKWFVEGDIKGCFDNVDHHVLIDILRKRIADEHFIGLLWKFLKAGYMEDWNYHNTYSGTPQGSIISPILANIYMNELDNYMAEYAEKFNCGNRRKINPAFKKKLDVCRGKEQRLKRNLSKMSEKEKEGLIAEIRELRRSLKSMPYSDQMDDSYKRICYVRYADDFLIGVIGSKEDAEQVKQEVGCFIREKLHLEMSGEKTLITHGHDFAKFLGYEVTIAKGEYSKKTKTGATRRVNNGKVLLYVPHDKWVKRLLSYNALKIKYDKQNGNKEVWEPVRRTRLLHLDDLEILNQYNAEIRGLYNYYRLANNVTVLNNFYYVMRYSMLKTFAGKYRTRISRIIRKYRQGKDFVVEYPKKNGKVGKVLFYNNGFRRNTKVESGNPDIVARVVENYGRNSLIKRLQANKCEWCGTENVPLEIHHVRKLKDLSGRKQWEIAMIGRRRKTMALCIDCHDKLHVGKLD
Homolog/Ortholog Species: Lysis protein
Homolog/Ortholog Protein: DWY43_RS10160, protector from prophage-induced early lysis, phage(gi100001), PHAGE_Pseudo_phi3_NC_030940
Homolog/Ortholog E-Value: 3.31e-33
ORF Start: 31918
ORF Stop: 32586
Strand: Backward
Protein Sequence: MDFLTDWLTNWIKELLIGGIMGNLEGLFDTVNTQVGEIAAQVGTTPAAWHAGVFSLIRQLSETVILPIAGMVLTFVATYELIQMLLEKNNMHEVDVANLYKWMFKTACAILILSNTFNIVMAVFDVSQSVIAQAGGLIQGSTDVSADMLAELETSLEAMDLGPLLGLWLQSALIGFTMKAMGIIIFVLVYGRMLEIYRASRSAAFHPKAVRGHFGNPALASR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DWY43_RS10165, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 32574
ORF Stop: 32585
Strand: Forward
Protein Sequence: TGAGAAAATCCA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
ORF Start: 32598
ORF Stop: 32750
Strand: Backward
Protein Sequence: MCRIGTAKFFTLLLLLYHTAKSQGMKQLMAGGGIIVIGTTLIPLLSGLF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DWY43_RS10170, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 32776
ORF Stop: 34401
Strand: Backward
Protein Sequence: MLRQTTQQLITALYPRLSHEDELQGESNSISNQKRILETYAKQNGFSNLRWYTDDGYSGANFQRPGFQAMLADIEAGKVGTVIVKDMSRLGRNYLQVGMYTEMIFPQKGVRFIAINDGVDSAQGENDFAPLRNIFNEWLVRDTSKKIKAVKRSKGMSGKPITSKPVYGYLMDEDENFIIDEEAAPVVRQIYSLCLAGNGPTKIARMLTEQQIPTPGTLEYRRTGSTRRYHPGYECKWATNTVVHLLENREYTGCLVNFKTEKPSYKLKHSIENPPEKQAVFENHHEPIIDRETWERVQELRKQRKRPNRYDEVGLFSGILFCADCGSVMYQQRYQTDKRKQDCYICGSYKKRTADCTAHFIRTDLLTAGVLSNLRKVTSYAAKHEARFMKLLIEQNEDGDRRRNAAKKKELEAAEKRIAELSAIFKRLYEDSVTGRISDERFTELSADYEAEQKELKERAARLREELSKAQEATANAEKFMNVVRRHTTIEELTPTLLREFVEKIVVHESVALDGKRRGKLRRQEIEIYYSFVGKVELPDT
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DWY43_RS10175, Site-specific recombinase, phage(gi31415812), PHAGE_Bacill_phBC6A51_NC_004820
Homolog/Ortholog E-Value: 9.82e-32
Terminase
Portal Protein
Coat Protein
Tail Shaft
Integrase
Phage-like Protein
Other
Transposase
Plate Protein
tRNA
Download data as .txt file: png_input file_download