Submission Results
Sequence Name: Not Available
GenBank Accession Number: NZ_QULU01000010.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: NZ_QULU01000010.1.PHASTER.zip
gi|00000000|ref|NZ_QULU01000010.1| Clostridiaceae bacterium OM02-2AC OM02-2AC.Scaf10, whole genome 113477, gc%: 44.62%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
---|---|---|---|---|---|---|---|---|
1 | 12.6Kb | incomplete | 50 | 6 | 21435-34115 info_outline | PHAGE_Clostr_phiCD505_NC_028764(2) | 44.29% | Show info_outline |
>1 21435-34115 AAAAGGAATTGAATACGGCATAGCCACACTTCTTGAATTGCGGGGATTTTTCTGCGCAAA GAAAGGAGTGTTTTTTTATGCAGGTTTACAAGACCATTAAGTACATCCGTCTTTCTTATA CGGATGACAAATCAGTGGAAAGCGACAGCGTTGCCAACCAGCGGCGGCTGATCGACGACT ACATTGCCAGGCATCCGGAAATTGAGGTTGTTGCGGAAAAGATTGACGACGGCTACAGCG GCGTTCTTTTTGACCGTCCGGCCTTCCAGGAAATGATGCGGATGATCGAGCAGGGCGAGG CCAACTGCGTAATTGTAAAAGACCTTTCCCGCCTGGGACGCGAATACATAGAAACTGGCC GTTATATGCGCCGGGTGTTCCCGGCTTACGGCGTCCGTTTTATCGCCATCAATGATAACG TGGACACGGAAACCGATGCTGCCGATGACCTTACCGTCTCTGTCAAAAATATTATGAATG AGGCATACAGCCGGGATATTTCTGTAAAGACCCGGAGCGCCCTGGATGTGAAACGCCGCA GCGGTGATTTTGTCGGAGCCTTTACCATTTACGGTTATGTAAAAACCGGCGATAAGCATA AAAGTCTGGAAGTTGACGAATATGCGGCGGGTGTGGTGCGGGATATTTTCAGAAAGCGTC TGGAAGGGTTTAGCGCTTCCCATATTGCGGATGAACTGAACCGGATGGGCATACTTTCCC CACTGGCATATAAACGCAATCACGGGATGCCCCATGCAAAAGGCGGCTATACGGATCGCA AGGACTGTAAATGGTCTGCGACTACCATTATCCGTATTTTGCAGGATGAAACCTACACCG GAACGCTGGTACAGGGAAAGCAGACGACGCCCCACTTCAAGCTGAAAGAGCGTGAGGACA AGCCTTCCTCCGAATGGGTCCGTGTGGAGGGTACCCACGAGGCAATTATCCAGAAACTTG ATTTTGATCTGGTGCAGAGGCTCCGAAGGATTGATACCCGCACCTCTCCAAAGTCAGATA AGGTCTACCTGTTCTCCGGCATTTTAATCTGCGGGTGCTGCGGTTGCCGCATGACCCGCA AGACGAACCGTTACAAGGACAAGGAATACCACTACTACTATTGCCCGACCGGAAAGAAAA ATGGCTGTACTTCCTCTGTCATGTTAAAGGAAACAGACTTGATCGAGTGTGTGCAGGACA GCTTGAAAGGCCATATTGAAAATGTAGCTTCCCTGGATGCTCTGCTGTCCAGTATTAGTC AGGAGCGGATCAACCGGGAACTGGTTCAGGAATATACCGCGCAGATCAAGGCAAACGAAA GGCAGCGGGCGCAGATCGAGGGATTCAAGACAAAGCTCTATGAGAACCTGGTAAGCGGGA TTCTCACCAAAGAAGAATATCTTTCCTATAAGCGGAAATACAATGCCGACATTGAACTTC TGCAAAAGGCGATTGACGAATGGGAAGAACGCCTGACGGATGTACTGGAGAACCGCAGCG AGCGGAACCGCTGGATCAACCATTTCATGCAGTTCTCCACAATGGAAGAAATTGACCGCC GTGCGGTCATGCAGCTTATCCGCAGTATCCGGGTAATCGGCAAGGACGAGCTGCATATTG AATTTAACTATCAGGATGAATATAAAAAGGCCGTCGCACTGGCGGAGCAAATCGCGGAAC AGGCCGCAGAAAGGAAGGCAGGCTAAATGGCAAGAAAAAGCAGGAAACAGACGGAATCTC CCATGCCGGCGCCGTCCTTATATGTATATGTGGCACTGTATATCCGGCTTTCCGTGGAGG ATAACAAGAAACGGGGCTGCTCCGTGGAGAACCAAAAGCTGGTGCTGAATGATTTTCTGG CGGACAAACCGGATTTTGTAGTCTATGACACATACATCGACAATGGACTGACGGGTACAA ATTTCCACCGCCCCGGATTTCAGCAGATGCTCTCTGATATTGAAGCGGGCCATATCAACT GTGTGATCGTTAAAGACCTTTCCCGGCTTGGACGCAATTCTATTGATACCGGCTATTATA TTGAGCAGTATTTTTATGCGCATAATGTCCGTTTTATTGCGGTCACGGACCAGTTTGACA CGGCGGACCCCGGCAACCTTCACGGCGGCATTATGCTTCCCCTGAAGAATATGATAAATG AAGCCTATTCTCTGGATATTGGAAGAAAGATCAAGGCACAGGCAAGACAGGCCATGAAAG ACGGCGATTATATTGGCGCACGGGCACCCTATGGCTACCGGAAAGACCCGGATAACTGCC ACAAGCTGCTGATCGATGAGAATACGGCTCCTGTCGTGAAACAGATTTTTGAATGGGCTT ATGAGCGCGTAGCGTTGAACCGTATCGTCCGTAACCTCAATGAAATGGGGATTGCGGCGC CAAGCCACTACAAAAAATCCACCGGTGAAATCACCAGCCCCGGCCTGATTGGGAGCGGCA AATGGCAGACCCGCACGGTAATGAAGATTTTAGAAAGCGAAGTTTATACCGGCGATCTGG TGCAGGGCAAAACAAAGATGGTGGACCACCAGCAGGTCAAGGCTGACGATGACAACCTGA TTATTGCCAGACGCACCCATGAGCCGATTATCAGCCATGAACTCTTTACTGCGGTACAGG AATACCGGAAACAGGTCTGCGAGGAAAGCCGGGCGGTCCCCAAACGCCCCTATACCCCGA ATATTTTCAAGGGTAAGGTATTCTGCGCCGACTGTGGCAGGAGCCTCCACCGGCAACGGG CGGAACGTAAAAAAGGCCCGGATATTTACTGGTTCCATTGCCTCACGAACAGCCGTGTGG CGAAAGATACCTGCAAAGGCGTGATGATGCAGGAGACAGAGCTGATTGCAACCGTCACCA CTATTTTAGAAAAAGAGCTGTCCGTTGCTTTGGGTATGTCCCTTCCTCTCTTTCAGTTGG AGGCAAGGCAGAAACAGAAAAAAGACGGGCTGAAATCCCAAATGTCTGCCAAACGGCAGG AAATAGAGAAACAGCGGCGTTTAATCCGGGGGCTGTATGAAAACTTCGTACAGGGCATTT TAACCAGCGATGAATATTTTGAACTGAAAGCAGGTTATGAGGAATCTATCACTGTCCTTT CCGGCGATATTGAGGCGCTTGAAAAAGATATGGATGCCCTGGATGACCAGCTTGTACGCT ACCGTGCAATGGAAAAAGACGCAAAATCACTGGCTCAGGACCATGTATTGACGGCGGAAC TGATTGAACGGCTGATTGAGCGGATTGAGATCGACCATGAGCGGAATATCCGTGTTTTTT TCCGGTTTAAGAGTGAATTTCAGGGGGAGGCGGTAAAATGAAGCAGAAATATGTGATTGC CCTTTATATCCGCCTGTCTGTGGAGGACTTCAAGACGGAAAGTTTGAGTATTCCCAACCA AAAGCTGCTCCTTCTGGAAAAGGCCATGTCGCTGCAGGAATGGGATAACAGCGAAGTCCT GGAATTTGTTGATAACGGCCATACAGGAACCAACTTTGAACGTCCCGCGGTACAGGAGCT TTTGACAATGGTGCAGGCCGGGAAAATTGACTGTATCATTGTGAAGGACCTTTCACGGTT TGGCCGCAACAGCATTGAGACCGGCTATTTCATTGAGCGAGTGTTTCCGCTTTACCATAC CCGGTTTATTTCTGTCAGCGACGATTTTGATACCGCCAATTTCAAAGGAGATACCGGAGG GATTGACATTGCCTTTAAGTATCTTATCAGTGAGTGTTACAGCCGGGATATGTCCATGAA AACGAAAAGCGCCAAATACGCAAAGATGCGCCGGGGCGAGTATCAAAGCGTCATTTGTCC TTATGGCTACCGTAAGAGCGCAGACGGGCGTATGGAACCGGACGAGGAAGTGTCAGAAAT TGTCCGGCAGATATTTGAATGGGCAGCCGACGGCAATACCGCCGCAGAGATCACGAGGAA ACTGTACGCCATGAAGATTCCTACGCCTGGAGAATACCGGAGGAATAAAGGCAAAGATCA CTACAATGTTTCCCGAACGCATGGCGTCTGGAACAGTTCAACGGTGCTGCGGATGCTGGC GGACCAACGGTATATCGGCACCTATGTGATCGGTAAGCGCAAGGTACAGGAGATTGGCAG CCGCCGCATGAAATTGAAGGATGAAAGCGAGTGGTTCAAAATCCCGGATCACCACCAGGC AATCGTAAGCAAGGAACTGTTTGAGAAAGCCAATGCTTCAATTAAGCGGTTCTCCCTTCC CAATAAAAAGCAGCGTGACTACCTTCTCCGTGGAAAGGTATTCTGTGGATGTTGCGACCA TGCCATGTCACTCAGAAATGATGTCTGGTTTTACTGCCGTCATTCCGAAGTGGCAGAAAA TCTTCCTTGTCACGGGGTAAGGGTAAAAATGGTTGATCTGGAGCAGGCGGTTTTTGAGAT AATCCGGGCGCAGATGTGTCCGGCGCTGGGAATTGACAGCAGCAAAGACAAGCTGGATTT GCAGACGGTTCAGCAGGCCGAGCATGAAGATAAGCTGCACTCTATCCAGGACAGTAAACG GCAGCTCTATGAACAGTATGCGCTTGGAGAGATTGACCTGGAAACCTACAGGGAGCGGAA AGCGGTATATGACGCGGAACTGGTGCAGGCAAAGAATGTCCATGCCGCTATTACCGCACA GACCAAACAGATACAAAGCGATTACGAAGCAAGACTGAAACAGCGTGAAATCGTTCAGGA AGTAGACAGTGCCGGCACTCTGACGCAAGCCCTGATTGACCGGCTTATCAATAAGGTCTA TATCTTTCCGGGAGACCGGATTGAGATTGAATATGTTACGCAGGACTTCTTAGCAACTGC GGAACCGTGAAAGGAGGCATGAGCCATGAACGCCGTATGGAACAGCTACGGGCAGCTATG CGGTTGCCCGGAAATTTTCAAAAAAAGTTGCAAATTTTTTTGTCGTGAGCTTGACATACG GGTGCCTTAATCCATGAATACGAATTCTTTTAACTCCTGTTTCCTTACATCCTCGATCCA TTTCATGATGCAAATATGATTTAGAAATCGGAAATAATCTTGTATCATCCTTACACCCAT AAAATCGTTCTATATAATCTTTCATTTCTTCTACAAGAAAATCAGGCATTAATACGATAC GATTACTCTTGTCTGTTTTAGGTGATGTAATTAGATCCTCACCTTTGATTCTTTGATAAG ATTTCGAAATCGTCATTGTCTTTTTATTAAAATCAAAATCATTTGGTGTTAATGCCAATA ATTCACCTAATCGTAAACCACACCAATACAAGATTTCAAATGCATGATAAGAAACGTCCT TATCTTTCATCGCTTCTGAAAACTTCAAATATTCTTCTTTTGTCCAAAACTCAACTTCCT TGCTTTTCTCTTTGCCCATGTTACCAGCAACCCTTGCCGGATTATTTGGTAGATTATAGA GCTTTACAGCATAGTTGAAAATGGCACTTAGCTGATTATGAAGTGTTTTTAAATAGCAAG GTGAGAATGCTTCTCCCTTATCATTACGATACATCAACATTTCATTTTGCCAATCTTTAA TATCTGATGGTTGGATTTCATTTATTTTCTTTTCTCCTAAATAAGGTAGAATTTTCATTT TTATGATATATTCCTTCGTATTTAACGTATTAAGTTTGACACGATGAGAACAATCTTTTA AATAAATGTCTACAAAATCTTTGAATGACATATCTAAGTTTTTAGATTCCTTTAATAGGA ACGTACGCTCATACTCTTGTGCTTCTTTTTTTGATTTAAATCCTCTTTTTAGCTTTCTAG TATGCTCACCTTTCCAATTTAAATATCTGATAGATACATACCAAGTGCCTTTTTTCTCAT CTTTGTATGTTGGCATAATCATAAACTCCTTCCTATTCTGTAATTCCATAAAAACGTTCT TCAAAATACTGCTTACTAATTCTTCCACGAATTGTGAAATAGCCTTTTGCTTCTAATTCA CTATTTAGCTGTTTAATCAGCTTATAAGCGCACTGTTCAGACATACCCGTAACTCGAGCA ATGTCTTCAGCACTCATGAATAAGTTATCGTTTTCCATCTATCACACCTCCTCTTTTTAT GTAAAGCAGAAGAAATCACTAAGCATATTTGTTTAATTGAAGCAACCACAGTATACTAGA CAATTTTGTTTAAGCCAATATTATATTAAACATTTTTGCTTAGTTTTTAGTTTACACATT ATATCTGCTTTGTTATAATGTGTTTGAAAAAGGAATTGAAAGGAGCAATTGCATGCCAAT AGGTACAAGAATTAAACGTATAAGAACACTTCGTGGTATCACTCAAAAAGAACTAGGAGT GAGATTAGGCTATTCCGAAAGAAATGCCGATATAAGGATTGCCCAATATGAATCAGGTAA ACGTACTCCAAAAGAGGATGTCATCAATGGCATTGCTCACATATTGGAAGTTTCTCCTGA AGCTTTAAAGATACCTGATATTGAAAATCATCATGGTTTCATGTTTACCCTTTTTGAGTT TGAAGAACAATTTGGCTTAACTGTTGATAAGGCAGAGAGTATGCCATTTCTTCGCCTTGA TAACGATCCTACCATTTACGACCATAGCATCAAAGAAATGCTAGATGATTGGTATGCTTG TAAATCAAAGCTAGCAAATGGCGAGATGACCAATGAAGAATATATCAACTGGAAATTGAA TTACCCTGAAAACTCTGATCTATTGTTTAACCGTAAACCGTCTAAAAAATAGTCAAAAGA ATCGTTCAATTTTATTTTGTGGTATCAAAACACCCTAAAACGCAAAAAAGTGCCCTGAAA AAGGCACTTTTTAGTTTAATACACTATTCGAACTCAATCGTTCCCGGAGGCTTGCTCGTA ATATCATACACCACCCGATTCACATGCTTCACCTCATTCACAATACGATTGCTGATAACA TCCAGCACCTCATACGGAATCTTCGCCCAATCCGCCGTCATTCCGTCAATCGAAGTCACC GCACGGATAGCCACCGCATAATCATATGTACGCTGATCCCCCATAACACCAACAGAACGC ATATTCGTCAGACACGTAAAATACTGCCAAATCTCCTTCTGCACCCCTGCCTTCGCAACT TCCTCGCGCAGAATCAGATCAGAATCCCGAACGATTTCCAGCTTCTCCTCCGTAATATCG CCCAGCACACGGATACCCAAACCAGGACCTGGGAACGGCTGCCGCCAAACCATCTCATCA GGCAATCCCAGCTCCGTACCCAATGCACGCACCTCATCCTTAAACAGCGTATTCAGCGGC TCAATCAGCTTGAACTGCATATCCTCAGGCAACCCACCAACATTGTGATGTGACTTAATC GTCTGCGCCGTCTTTGTCCCTGACTCAATGACATCCGTATACAGCGTTCCCTGCGCCAGC CACTTGATATCCTCACCTGAAGTCAGCTTCTTCACTTCCTCATCAAAGGTATACACAAAC TCATTTCCGATGATTTTACGCTTCTTCTCCGGATCACTCACACCCGCCAGCTTACTCAGG AAACGCTCCTTTGCATCGATTTTCACCAAATTGATATTCATCTCGCGCCCGAATGTTTCC ATAACGCTTTCCGCCTCGCCTTTACGCAGCAAGCCGTGATCAATAAACATACAAATCAGC TGATCCCCAATCGCCTTATGCAGCAATGCCGCAACAACAGAGGAATCCACACCTCCGCTC AATCCCAACAGCACCTTGTCCGTACCGACAGTCTTGCGGATCTTCTCAATTTCCATATCA ATGAAGCTGTGCATAGACCAGTCATTCTTCGCCTTGCAGACCTCAAAAACAAAATTTTTC AGAATCTCGTTTCCATACTCGGAATGACGCACCTCCGGGTGGAACTGCAGCGTATACATA TTCTTCTCTATATTGCTGGTAGCCGCAAATGTACAGGTATCACTGTATGCATCCTTCACA AAGCCATCAGCCAGTGTATCCACCTGATCACCATGACTCATCCAGACGATCTGCTTTTCC GGCAAACCTTTGAAAATTGGAGAATCCGTCTTAACCGTAATCTCTGTTCTTCCATATTCC TTTGCTTCACAAGCCTTCACACTTCCGCCATTCATAAAATGTGTCATCTGCATACCATAG CAGATACCAAGAATAGGAATACCGGATTCAAAAATTGCTGGATCGCATTTAAACGCTTCC TCATCATATACACTGTTTGGTCCACCAGAGAAAATGATTCCCCGGACATCCTTCAGTGCC AGAATTTCTTCCAGTGTCATCGTGTGCGGGTGCAATTCAGAATAAACACCAAACTCACGA ATACGACGTGCTATCAGCTGGTTATACTGACTTCCGAAGTCAAGTACGATAATTTTATCA GCCATGAATGTATCCTCCTTATTAAGAAGCCGATACCATAGCGAGCATGTATAGTATCGG CGTCGTTGAAATACTAAGATTTCCGTGTATTATAATATCATTATTTTTCTGATTTTAAAA TCTTTTTCTACATAAATTGCGGCAGTGCGAAGTAGATAAGGAAAATCACCATCAATACCC ATACCGTGATATGTACTTCCTTTGCTTTACCGGCAGCCGTCATTGCAATCGCATAGGCAA TAAATCCAAACGCGATCCCATTGGAAATGGAATATGTCAGAATCATCATAAGAACCGTAA TGAATCCGGCAGTCGCATATACCATGTTATCCCATTCGATTTCCTTCAGCTGCTGTGCCA TCAGAATACCCACAACAACAAGAGCAGGAGCCGTAACCGCATTTGTTACCGCAGATAACA CGATTGGCGAAAACAGAATAGATACAAAGAACAGTATACCCGTCGTACAAGCTGTTAAAC CGGTTCTACCGCCAACCTCAACACCGGACGTTGATTCCACAAAGGAGGTAACCGTAGAAG TACCTAACGCAGCACCTGCAACAGTACCTACCGCATCCGCAACCAGTGCACGCTCCACAT TCTCCAGCTCACCCTTCTCATTCACCAGACCGATTCGGTTCGCAACAGCAACCAGCGTAC CGGCAGTATCAAAGAAATCCACAAACAGAAAGGAGAAAATCACAACAAACGCATTCAACG GATTCGCGAACAGCTCACCGAAACCATCCATAAAAGAACCTGCCGCATTCAGATGGAAAT TCATTTCAAAGAATTTATCAGGCAATGCCGGCATTCCCTTTAACCCAAATGCTGCACCGC AGACAATTCCAATCACCGCAGTTATCACCATTCCGACAAAAACAGCAGCCGGTACCTTTT TAACAAGCAAAGCGATGGTCAGAAGAATGCCGAAGAGTGCAAGCAGCACCTTTGGATCCG CAAAATTACCGATTGTTACAAAGGTAGACGCACTGCCTGCTACAATCCCTGCATTTTTCA ATCCAACAAAAGCGATAAAAAAACCGATACCGGCCCCGATCGCCATCTTCAGCTGCTTTG GAATCGCATTGATAATCGCTTTACGAATACCGGTAACTGAAATCACGATGAAAATCAAAC CGGAAATAAATACGCCAGCCAATGCAGCCTGCCAGCTCATGCCCATCTGTCCGCAGATCG TGTAGGCAAATAATGCATTTACCCCCATACCGGCAGCCAGCGCAACCGGGTAGTTCGCCA CCAATCCCATAACGATAGAGGCAAAGCCTGCAGAAATAGCTGTCGCCATAAAAACAGACG CGCGATCCATACCTGTATCATGCAGAATAGACGGGTTTACCCCAAGGATATAAGCCATTG CCAGAAAGGTTGTAATGCCGGCAATTACCTCGGTTTTTACAGAAGTCTGCTTCACGTTCA ATTTGAATAATTTTTCTAACATAATTCCCTCTTTTCTGTCTCCCAAAACAAAAAAACACC GCAAACCGCAGTATTCGTATATAAGCTTCCATCGTAGTCTGAAATTGGTTTTCAGGTAGA AACGCTTTCACCATCATGTCGAAAGTATATACGATGTTTCTATAGACTTGTACATTATAG ACAAAAATGAAACAATTTGCAAGTAATATTACCCGAAGTTTTAATAAAAGAAAAAAGCTT CCTCACTCGAGGAAAAATCGCTTTTCATCCGTAACTACATAAGCACGCTGATCCGCACAG CCAATAGCTGGCAGATTCTGTTTCCTGCAAACCATATCGAAGGATTTACGTTCTTCCTTC TGATAATGTGGACAGAACGCCCCTTTAATCATCCCCATACCATTCACAAGTTCAAATGTG TCTGATGCGATGTTGCTGTAGCCATATTCAAATAGAGCATTCGCCCCGGCACTGATTCCG CAGATAACGATTCCCTGCTGGGATAGCTCCTTTAAAAGCAAATCCAGCTTTCTCTGTTTC AGCTGCTCCATGAGAAACACGGTATCGCCTGCCCCAAGATAAATCATATCCTGTGAACGG AATTTCTTATATATTTCTTCATTACTCAGCTTTGTATGCAGCAGACGCAATGCTTCGACC TGACAGCCAAGGCTACGGTAATATTGTTTGAAGCGTTTCGCATAACCCTGATCATCTCTG CTTGCTAGCGGAATAAACAATACATGCGGCTGTGTTTTTTCACACCTGGAAATCGCATAG GTGTCGATTGCCATTGTTTCCTGCTTTTGAAAGCTTCCGCCGCCAATTGCAATCAGTGTT TTCATTTCAGAAAGAACCGGCTTTCCTTTAAAGCCTGCAATGCCTGTTCGATAACTTCAT CACTTTGAACGAGTGCAATTCGTACAAAGCCCTCACCATATGCTCCAAAAGAACTTCCAG GAGTCACCAGCATACCGCTGCATTTTAACAGGTTTAAAGCAAATTCTTCACTGCTTCCAA AGCCTTCCGGTATCTGTGCCCATAAGAACATGGTACTCTTGCATGAAGCGATGTGCCAGC CTGCAGCTGCAGCACCTGCAACGATACGATTTCTTCTTCTCTGATAGGTATCACGAGTTT CTTTCACAATGCTTTGGTCTTGTGTTAAAGCTGCGATTGCGGCCTTTTGAATAGGTAAAA ACATACCGTAATCAATATTGCTTTTCAGTTTCCTCAGTATACCGACGATTTCCGCATTCC CCACACATATTCCAATACGTGCTCCCGCCATACCATAGGTTTTACTAAAGGAATTAAATT CAATACCAATATCCTTTGCGCCCGCATAATATAAGAAGCTTTTCCCTTCCTCTCCGTCAA ACACAAGATTACTGTAGGCTGTATCATGAATCACGATAATATCATGTGTCTTTGCAAATC GAATCAATTCTTCATAAAAACTATCTGGAGCCGTAGCACCTGTTGGATTATTCGGATAGG ATATAATCATCATTTTAGCCTTTTCTGCTATTTCTTCAGGAATTGCATCGAATTGAATCA GATATTCATGTTCCTTCAGCATCGGCATTTCATATAAATTTGCTCCGGCTATTTTCGGTC CGTTCGCAAAGATAGGGTAGCTAGGAGCAGGAATGAGAACGGTGTCCCCCTCATCACATA GTGCCAATGCGACATGTGCAAGCCCTTCCTGAGAACCCTGCAGAGACAGTATCTCTGTTT CTGTATCCAATTCTACCTGATATCGTTTTCTGTACCAGGCTTGTATCGTTTCTTTTAATT CTTTTGTATCATGAAGTGAATACATATAGCTTTCAGGCTGCTGTGCAGCAGTGATTAGTG CATCCATGACTTCTTTACTTGGTGCTATGTTAGGAGATCCTATCGTAAAGTCATACACTG CTTTCCCATCAGCCAGCATGTTTTGTTTTTCTTCATCAAGTCTGCTGAAAACACCTTCTG CAAGTAAATCCATTCGCTTGGAAAATTTCATATTCTCCCTCTTTCCTGATATTTCATATT TCTCTCATTATAAAAGAAAAGACCGTTCCCTTCAATAGCTGATGGGTGAATTTTACAACC TTCGTATGGTTTACACGAACAGATTCTAAAAACTGACCTCAATTACATTTTTTTTAGCAC TTTGTAAAGTTTCTGTTATAATAAAAGTAGAGATGTCATATCCACTCACATGTTCTTTGC GCGAACCCCTAGCTCACATGATTTTCCAGGAAGGTTCGCGCCACATAATTGTGTTTTTAG ACATAATGTAACAATTTTCAGCAAAAGCACAGTAAATAATAAAATGTAAATAATGTTTTT TGTTACATTTGGAGTGGTTTATCACAAATCTCACGGTCAAGCTCTTTCGCGGAGCTTGTG GATCTAAATTCGGTTGAAACACGAAAAGTATTTAAGGAATGGGTCAAGCTCTTTCGCGGA GCTTGTGGATCTAAATAGCTTTTTAAGCGTGGTTGTATAATCAGCAGCATGTCAAGCTCT TTCGCGGAGCTTGTGGATCTAAATATAGCAGTGACCGTCGATTGAGCATTTCTTTTCCAG CGTCAAGCTCTTTCGCGGAGCTTGTGGATCTAAATAACCGGTTGGCAAACACAGAGGAAG AGGACTGGGTCAAGCTCTTTCGCGGAGCTTGTGGATCTAAATGATCTGGAATGATGACGA CCTTTATACGATTCAGTCAAGCTCTTTCGCGGAGCTTGTGGATCTAAATGGTAGTGGAAT AATCTTCGCTTAAATGATCGTTGTCAAGCTCTTTCGCGGAGCTTGTGGATCTAAATTGGC TTATATACTGATGATATGAAA
Region | 1 |
Region Length | 12.6Kb |
Completeness(score) | incomplete(50) |
Specific Keyword | integrase,recombinase |
Region Position | 21435-34115 |
# tRNA | 0 |
# Total Proteins | 6 |
# Phage Hit Proteins | 6 |
# Hypothetical Proteins | 0 |
Phage + Hypothetical Protein % | 100% |
# Bacterial Proteins | 0 |
Attachment Site | yes |
# Phage Species | 4 |
Most Common Phage Name(hit genes count) | PHAGE_Clostr_phiCD505_NC_028764(2) PHAGE_Bacill_phBC6A51_NC_004820(2) PHAGE_Clostr_phi3626_NC_003524(2) PHAGE_Clostr_phiMMP02_NC_019421(2) PHAGE_Staphy_42E_NC_007052(1) PHAGE_Staphy_B166_NC_028859(1) PHAGE_Staphy_SpaA1_NC_018277(1) PHAGE_Staphy_SA12_NC_021801(1) PHAGE_Bacill_phi4J1_NC_029008(1) PHAGE_Bacill_BM5_NC_029069(1) PHAGE_Staphy_53_NC_007049(1) PHAGE_Brevib_Jimmer2_NC_041976(1) PHAGE_Staphy_71_NC_007059(1) PHAGE_Lactob_phiPYB5_NC_027982(1) PHAGE_Bacter_Lily_NC_028841(1) PHAGE_Staphy_11_NC_004615(1) PHAGE_Thermo_THSA_485A_NC_018264(1) PHAGE_Geobac_E2_NC_009552(1) PHAGE_Paenib_Xenia_NC_028837(1) PHAGE_Paenib_Shelly_NC_041909(1) |
First Most Common Phage # | 2 |
First Most Common Phage % | 33.33% |
GC % | 44.29% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
Questionable (score 70-90)
Incomplete (score < 70)
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Score: | The score of the region based on the above criteria. |
# Total Proteins: | The number of ORFs present in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NZ_QULU01000010.1| Clostridiaceae bacterium OM02-2AC OM02-2AC.Scaf10, whole genome 113477, gc%: 44.62%
Download details as .txt file: detail.txt file_download
Hits against Bacterial Database or GenBank File
Region 1, total 8 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | 21435..21446 | attL | 0.0 | Showinfo_outline |
2 | 21512..23140 | PHAGE_Lactob_phiPYB5_NC_027982: putative integrase; DXB22_RS07645; phage(gi937456185) | 2.15e-23 | Showinfo_outline |
3 | 23141..24775 | PHAGE_Bacter_Lily_NC_028841: serine recombinase; DXB22_RS07650; phage(gi971748323) | 4.36e-29 | Showinfo_outline |
4 | 24772..26304 | PHAGE_Bacill_phBC6A51_NC_004820: Site-specific recombinase; DXB22_RS07655; phage(gi31415812) | 1.20e-23 | Showinfo_outline |
5 | complement(26350..27330) | PHAGE_Clostr_phi3626_NC_003524: putative integrase; DXB22_RS07660; phage(gi20065985) | 3.29e-86 | Showinfo_outline |
6 | complement(27347..27532) | PHAGE_Clostr_phi3626_NC_003524: Gp27 protein; DXB22_RS07665; phage(gi20065990) | 1.01e-10 | Showinfo_outline |
7 | 27727..28206 | PHAGE_Bacill_phBC6A51_NC_004820: Transcriptional regulator; DXB22_RS07670; phage(gi31415744) | 2.59e-06 | Showinfo_outline |
8 | 34115..34126 | attR | 0.0 | Showinfo_outline |
>21435..21446
AAAAGGAATTGA
>21512..23140
ClostridiaceaebacteriumOM022ACMQVYKTIKYIRLSYTDDKSVESDSVANQRRLIDDYIARHPEIEVVAEKIDDGYSGVLFDRPAFQEMMRMIEQGEANCVIVKDLSRLGREYIETGRYMRRVFPAYGVRFIAINDNVDTETDAADDLTVSVKNIMNEAYSRDISVKTRSALDVKRRSGDFVGAFTIYGYVKTGDKHKSLEVDEYAAGVVRDIFRKRLEGFSASHIADELNRMGILSPLAYKRNHGMPHAKGGYTDRKDCKWSATTIIRILQDETYTGTLVQGKQTTPHFKLKEREDKPSSEWVRVEGTHEAIIQKLDFDLVQRLRRIDTRTSPKSDKVYLFSGILICGCCGCRMTRKTNRYKDKEYHYYYCPTGKKNGCTSSVMLKETDLIECVQDSLKGHIENVASLDALLSSISQERINRELVQEYTAQIKANERQRAQIEGFKTKLYENLVSGILTKEEYLSYKRKYNADIELLQKAIDEWEERLTDVLENRSERNRWINHFMQFSTMEEIDRRAVMQLIRSIRVIGKDELHIEFNYQDEYKKAVALAEQIAEQAAERKAG
>23141..24775
ClostridiaceaebacteriumOM022ACMARKSRKQTESPMPAPSLYVYVALYIRLSVEDNKKRGCSVENQKLVLNDFLADKPDFVVYDTYIDNGLTGTNFHRPGFQQMLSDIEAGHINCVIVKDLSRLGRNSIDTGYYIEQYFYAHNVRFIAVTDQFDTADPGNLHGGIMLPLKNMINEAYSLDIGRKIKAQARQAMKDGDYIGARAPYGYRKDPDNCHKLLIDENTAPVVKQIFEWAYERVALNRIVRNLNEMGIAAPSHYKKSTGEITSPGLIGSGKWQTRTVMKILESEVYTGDLVQGKTKMVDHQQVKADDDNLIIARRTHEPIISHELFTAVQEYRKQVCEESRAVPKRPYTPNIFKGKVFCADCGRSLHRQRAERKKGPDIYWFHCLTNSRVAKDTCKGVMMQETELIATVTTILEKELSVALGMSLPLFQLEARQKQKKDGLKSQMSAKRQEIEKQRRLIRGLYENFVQGILTSDEYFELKAGYEESITVLSGDIEALEKDMDALDDQLVRYRAMEKDAKSLAQDHVLTAELIERLIERIEIDHERNIRVFFRFKSEFQGEAVK
>24772..26304
ClostridiaceaebacteriumOM022ACMKQKYVIALYIRLSVEDFKTESLSIPNQKLLLLEKAMSLQEWDNSEVLEFVDNGHTGTNFERPAVQELLTMVQAGKIDCIIVKDLSRFGRNSIETGYFIERVFPLYHTRFISVSDDFDTANFKGDTGGIDIAFKYLISECYSRDMSMKTKSAKYAKMRRGEYQSVICPYGYRKSADGRMEPDEEVSEIVRQIFEWAADGNTAAEITRKLYAMKIPTPGEYRRNKGKDHYNVSRTHGVWNSSTVLRMLADQRYIGTYVIGKRKVQEIGSRRMKLKDESEWFKIPDHHQAIVSKELFEKANASIKRFSLPNKKQRDYLLRGKVFCGCCDHAMSLRNDVWFYCRHSEVAENLPCHGVRVKMVDLEQAVFEIIRAQMCPALGIDSSKDKLDLQTVQQAEHEDKLHSIQDSKRQLYEQYALGEIDLETYRERKAVYDAELVQAKNVHAAITAQTKQIQSDYEARLKQREIVQEVDSAGTLTQALIDRLINKVYIFPGDRIEIEYVTQDFLATAEP
>complement(26350..27330)
ClostridiaceaebacteriumOM022ACMPTYKDEKKGTWYVSIRYLNWKGEHTRKLKRGFKSKKEAQEYERTFLLKESKNLDMSFKDFVDIYLKDCSHRVKLNTLNTKEYIIKMKILPYLGEKKINEIQPSDIKDWQNEMLMYRNDKGEAFSPCYLKTLHNQLSAIFNYAVKLYNLPNNPARVAGNMGKEKSKEVEFWTKEEYLKFSEAMKDKDVSYHAFEILYWCGLRLGELLALTPNDFDFNKKTMTISKSYQRIKGEDLITSPKTDKSNRIVLMPDFLVEEMKDYIERFYGCKDDTRLFPISKSYLHHEMDRGCKETGVKRIRIHGLRHPYVKLTTKKFATFFENFRATA
>complement(27347..27532)
ClostridiaceaebacteriumOM022ACMENDNLFMSAEDIARVTGMSEQCAYKLIKQLNSELEAKGYFTIRGRISKQYFEERFYGITE
>27727..28206
ClostridiaceaebacteriumOM022ACMPIGTRIKRIRTLRGITQKELGVRLGYSERNADIRIAQYESGKRTPKEDVINGIAHILEVSPEALKIPDIENHHGFMFTLFEFEEQFGLTVDKAESMPFLRLDNDPTIYDHSIKEMLDDWYACKSKLANGEMTNEEYINWKLNYPENSDLLFNRKPSKK
>34115..34126
AAAAGGAATTGA
Questionable (score 70-90)
Incomplete (score < 70)
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Click on a region in the genome above to show details here.
ORF Start: 21435
ORF Stop: 21446
Strand: Forward
Protein Sequence: AAAAGGAATTGA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
ORF Start: 21512
ORF Stop: 23140
Strand: Forward
Protein Sequence: MQVYKTIKYIRLSYTDDKSVESDSVANQRRLIDDYIARHPEIEVVAEKIDDGYSGVLFDRPAFQEMMRMIEQGEANCVIVKDLSRLGREYIETGRYMRRVFPAYGVRFIAINDNVDTETDAADDLTVSVKNIMNEAYSRDISVKTRSALDVKRRSGDFVGAFTIYGYVKTGDKHKSLEVDEYAAGVVRDIFRKRLEGFSASHIADELNRMGILSPLAYKRNHGMPHAKGGYTDRKDCKWSATTIIRILQDETYTGTLVQGKQTTPHFKLKEREDKPSSEWVRVEGTHEAIIQKLDFDLVQRLRRIDTRTSPKSDKVYLFSGILICGCCGCRMTRKTNRYKDKEYHYYYCPTGKKNGCTSSVMLKETDLIECVQDSLKGHIENVASLDALLSSISQERINRELVQEYTAQIKANERQRAQIEGFKTKLYENLVSGILTKEEYLSYKRKYNADIELLQKAIDEWEERLTDVLENRSERNRWINHFMQFSTMEEIDRRAVMQLIRSIRVIGKDELHIEFNYQDEYKKAVALAEQIAEQAAERKAG
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: DXB22_RS07645, putative integrase, phage(gi937456185), PHAGE_Lactob_phiPYB5_NC_027982
Homolog/Ortholog E-Value: 2.15e-23
ORF Start: 23141
ORF Stop: 24775
Strand: Forward
Protein Sequence: MARKSRKQTESPMPAPSLYVYVALYIRLSVEDNKKRGCSVENQKLVLNDFLADKPDFVVYDTYIDNGLTGTNFHRPGFQQMLSDIEAGHINCVIVKDLSRLGRNSIDTGYYIEQYFYAHNVRFIAVTDQFDTADPGNLHGGIMLPLKNMINEAYSLDIGRKIKAQARQAMKDGDYIGARAPYGYRKDPDNCHKLLIDENTAPVVKQIFEWAYERVALNRIVRNLNEMGIAAPSHYKKSTGEITSPGLIGSGKWQTRTVMKILESEVYTGDLVQGKTKMVDHQQVKADDDNLIIARRTHEPIISHELFTAVQEYRKQVCEESRAVPKRPYTPNIFKGKVFCADCGRSLHRQRAERKKGPDIYWFHCLTNSRVAKDTCKGVMMQETELIATVTTILEKELSVALGMSLPLFQLEARQKQKKDGLKSQMSAKRQEIEKQRRLIRGLYENFVQGILTSDEYFELKAGYEESITVLSGDIEALEKDMDALDDQLVRYRAMEKDAKSLAQDHVLTAELIERLIERIEIDHERNIRVFFRFKSEFQGEAVK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DXB22_RS07650, serine recombinase, phage(gi971748323), PHAGE_Bacter_Lily_NC_028841
Homolog/Ortholog E-Value: 4.36e-29
ORF Start: 24772
ORF Stop: 26304
Strand: Forward
Protein Sequence: MKQKYVIALYIRLSVEDFKTESLSIPNQKLLLLEKAMSLQEWDNSEVLEFVDNGHTGTNFERPAVQELLTMVQAGKIDCIIVKDLSRFGRNSIETGYFIERVFPLYHTRFISVSDDFDTANFKGDTGGIDIAFKYLISECYSRDMSMKTKSAKYAKMRRGEYQSVICPYGYRKSADGRMEPDEEVSEIVRQIFEWAADGNTAAEITRKLYAMKIPTPGEYRRNKGKDHYNVSRTHGVWNSSTVLRMLADQRYIGTYVIGKRKVQEIGSRRMKLKDESEWFKIPDHHQAIVSKELFEKANASIKRFSLPNKKQRDYLLRGKVFCGCCDHAMSLRNDVWFYCRHSEVAENLPCHGVRVKMVDLEQAVFEIIRAQMCPALGIDSSKDKLDLQTVQQAEHEDKLHSIQDSKRQLYEQYALGEIDLETYRERKAVYDAELVQAKNVHAAITAQTKQIQSDYEARLKQREIVQEVDSAGTLTQALIDRLINKVYIFPGDRIEIEYVTQDFLATAEP
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DXB22_RS07655, Site-specific recombinase, phage(gi31415812), PHAGE_Bacill_phBC6A51_NC_004820
Homolog/Ortholog E-Value: 1.20e-23
ORF Start: 26350
ORF Stop: 27330
Strand: Backward
Protein Sequence: MPTYKDEKKGTWYVSIRYLNWKGEHTRKLKRGFKSKKEAQEYERTFLLKESKNLDMSFKDFVDIYLKDCSHRVKLNTLNTKEYIIKMKILPYLGEKKINEIQPSDIKDWQNEMLMYRNDKGEAFSPCYLKTLHNQLSAIFNYAVKLYNLPNNPARVAGNMGKEKSKEVEFWTKEEYLKFSEAMKDKDVSYHAFEILYWCGLRLGELLALTPNDFDFNKKTMTISKSYQRIKGEDLITSPKTDKSNRIVLMPDFLVEEMKDYIERFYGCKDDTRLFPISKSYLHHEMDRGCKETGVKRIRIHGLRHPYVKLTTKKFATFFENFRATA
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: DXB22_RS07660, putative integrase, phage(gi20065985), PHAGE_Clostr_phi3626_NC_003524
Homolog/Ortholog E-Value: 3.29e-86
ORF Start: 27347
ORF Stop: 27532
Strand: Backward
Protein Sequence: MENDNLFMSAEDIARVTGMSEQCAYKLIKQLNSELEAKGYFTIRGRISKQYFEERFYGITE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DXB22_RS07665, Gp27 protein, phage(gi20065990), PHAGE_Clostr_phi3626_NC_003524
Homolog/Ortholog E-Value: 1.01e-10
ORF Start: 27727
ORF Stop: 28206
Strand: Forward
Protein Sequence: MPIGTRIKRIRTLRGITQKELGVRLGYSERNADIRIAQYESGKRTPKEDVINGIAHILEVSPEALKIPDIENHHGFMFTLFEFEEQFGLTVDKAESMPFLRLDNDPTIYDHSIKEMLDDWYACKSKLANGEMTNEEYINWKLNYPENSDLLFNRKPSKK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DXB22_RS07670, Transcriptional regulator, phage(gi31415744), PHAGE_Bacill_phBC6A51_NC_004820
Homolog/Ortholog E-Value: 2.59e-06
ORF Start: 34115
ORF Stop: 34126
Strand: Forward
Protein Sequence: AAAAGGAATTGA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Terminase
Portal Protein
Coat Protein
Tail Shaft
Integrase
Phage-like Protein
Other
Transposase
Plate Protein
tRNA
Download data as .txt file: png_input file_download