Submission Results
Sequence Name: Not Available
GenBank Accession Number: NZ_QUPD01000015.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: NZ_QUPD01000015.1.PHASTER.zip
gi|00000000|ref|NZ_QUPD01000015.1| Listeria monocytogenes strain CFSAN028785 AFX46_15, whole genome 13973, gc%: 37.37%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
---|---|---|---|---|---|---|---|---|
1 | 13.9Kb | incomplete | 10 | 14 | 1-13973 info_outline | PHAGE_Lister_A006_NC_009815(14) | 37.37% | Show info_outline |
>1 1-13973 TTTGCAACAATATTTAATTTTTCAACAAGTGTATCTGTGAAAAACAAATCACGGTTAGGG TCATGTGTGCCTGATGCCGCAGCGTATATATTTAATTGAGCTAATTTTTTTGTGTATTTA TTAGCGGTATCTACAAATACCTTTTTCTTCGTCCAGACAGGCTTTATATTACTATCTAGT TTGATAATTTCAGCGGTAAATTGATTCCCTATTTTAGTTAAAATAAAGTAACCATAAAAA TCTCTGTATTCATTATATGCACCTGTTTGTACCTTCTCTGTCACTGTTTTATATTTTCCG TTAACTTTTTTTCTAGTTGATACTGTTTTGTATGTTTTAGTAACTTTCCCTGCCTCATTA AACAAATCTTTTTCAGGATAATTAGCAACATTTTGATCGCCAATAGATATTTTAACAATA TTGACTTCGGTATTTGCGGCATTATCTTTTATTTGAAACGTTGCAATTTTTGCTCCTTTT TCATCAACAAGATACACTTCTAATTTACCTTGTTGTTTTTGTGCCGATGCTATGTTTTGA AGGCGCATTCTTACACGCCAGTTATCCTGCGCTTGGGGAAGAACTACTTTACTCATTGGT CCATGCCACTGTGCGCCAACACCATAATCAGATGCTCGGAATACATTTGCGGTTGAAGTG AAACTCCCATCAATAATCCCGTTATTTGCGTCTAATTGAAATGTCAAATCTGACTGTTTC ATGGGGGTCCATGTAGCTAACACATTCATTGGATCGTTTAAAATTATTTCTGATGGTTTA ACTGGAGTTTCTCCAGAATCTGGATCAACTCCTTCGCCAATGTATAAGTAATCCTCTTTA TTCGATACAGCGATATAAGTGACATCCTGTTTTATAACTGCTCCAATTACAGGGCTGGTA GGTTGTGAACCGCGTACTGGTAATTTGTTACTTTCGCTAGTTAGCTCAAATTCTTCTTGT TCATAATAAACATACGGGTCTGAACAAACAAAATTCAGCGTTGCCCGTCCGTTATATAAA AGCCTATCTAAGTCTGTAGGTCCTTCAAATCGACCATAATACGTCTTTTCAGGCGCATCA TCAATTACCAAAGAGCGTTCTTCTGCATCTACCTGCATCAACCAATCAGCGACAGATGTA GCCCGCTCACTTAATTCTTTAAGGCTATCTCCAATAATTTGTATTTCTAATTGTATCCCT CGTTGACCAACATTTGGTCCAAAATAAAAAGCGCCAATACGACCACTGACGCTTTCCGTA TTGCCTTCGTTCTGAGGGAACAATGGTGGTTTAATGTCAATTATTTCCACATGCTTATCA AATGAATGAATACCTTTATATGTGAATCCTAAGCTCATAAAATCACCCCTTGTGCTCGAT TAGTTCTAATAATACGGTTGTTTTGAATTTCTGTTATAAAATCTACCGTTTCCTCCGCCA CTATACGCCCCTCTAACATTGTTTTATTAACAATTTGAATTGGTTGTACTGTAACTGGGT TTCCGCTTCCTTGCGTTGCTATAGAAGCCCCTGAGTAAGCCGTAATTTCTTTTGTGTTCG GGGTAACTGGGACTGAAATAGCAGGTGATAGACTTGTTAAATGTTTTTGCATTTTATGAG CCGCCAAATCTATAGTATTTAGATTCTTAAGCATTCCGACTCCAATTCCCGCTGGCACTT GTTCACCAACTTCATCGCTCATTAGCCGAGAAGGCGAGTGGATTTTCAGTCTTTTCTTGA TTGTCGATTCAATTGTTTTAGCTAGTTGATCCGCTTGTTTCTCTAGCGGACCGTTCATTT GCTTGAACCCTTGAATAATCCCCGCTACGGTCTGTACACCAAGTTTAGAGCCAGCAGTGC GATATTCTTTTGCTTTATCAAGTTCTTTCAACCAAGAAGCGTTCGCATTTGCCAAATCTT TTTTAGCTTTATCGTTCGCCGCCTTGACAGCTTTATCCATCGCCACTTTATCATTTACAG AAGCGTCTAATCCCAGCTTGTTTGCATTAGCATGTTTTTTACTCCACTCAGCTTGATATT GTTTCAGTTGTGTATCAGACATTCCCGCAATTGCTTTAGCTTGTCCTGTTGCGCTTACAC CCATATTGCGTATCTCGTCTATAAGACCTTTACTAACACCGCGTTTTTTCATTTTATCAA GTTGAGCCATAAAATCTTTTTGTTGGGCTGTTTGTGATTTAAGATTTTTTGTTAATTCGC TACCACTTGATTTCTCTGTAACAGCAGCATCAAATAGTCCAGTCTGATTATATGCGGCTT CTTGATTTGATTTAAGAGCATCCTTATATGTCTTTTTCGCTTCATTAATAGAATCCTTAG CCGTTTTATTTATTTTAGCAACATTATCATAATATTTTTGTGCGCTACTTTTTATTGATT TATTAAGTTTAGTTTTTTGTGTATTAATTTCTTTGTTTGCTCCAGCAATATTTAATTTGA TTTGTCTTGTTTGCGCTGCATTTAAGCGATATTGCTTATTAATTTGTTTTAATTTATTAA TGTACGATTGTGCGCTAATTGCGCCTGTTTTATAATCTACTTGCACATTTGATATTTTAT TACTTACATTTTTCGCATAGCTTGTTTTAGTACCTTTTGCATAACGAGGTACGTTACTCA AAGCTTTAGCTGTTTTATCTCCTCGCAACACCTCAGTACCCCGTGGTAGATCAAGAAGAA CATTACGCCCTTTTGGAACAAAACTTTTTCCGTCAGGTGTAGTAATCATTTCTTCGTAGT TGCTTCCCTTTGCATCATTTACTAGAGCTGGTCCACCTTTATGATTATTCGTACCTCTAG CATAACCTACCTCTTGAATCCCGCTAGGACTTTTACCGCTCGTTTTATATGCAATAGAAA TTACTTTTTGATTCTTCATGTTGAGCATATCTCGCCACGAATTTATAGCATTGTCAATGG CGTTTTTCGTAGCCTCTGCGTTAGAATTAATAACTAAATCTTTTCTATGGATAGCTATGT TGTTATAGTCGTTTACTGTTCTACTACCTCTATCAATTTTTGATAACAGGTCTCTGTTGT TTGCAAAAAGGGTTTTTAGATTCACCTTTTGCCCGTTATATTGAACAATAACATCTTTAC CGTTCTGTATTTTTTTTCTTACATCAAAGTCATTCGCTAAGAGCGTTTTTAAATCTACGT TCGTTCCGTTATAGCTAACTAACATCCCTTTAGAAGAATTCATTTTCTTTATTACATCTG AATTATCAACTACTAAAGTTTTCATCGATGGAGGTAATTTGTCCCAAACTCCCATGTCTT GCAGTGCTTTTTGTAGTGCGAGGCTAGTATCTGCATTCGCAATCATACTTTTTTGTTCAG GCTTCAATTTATCCCAAATACCTAAATCTGACAGCGCGTTAGCTACATGTATAGAGTCCT CGTAACTGACAATTAATTTCTTTTCGTTGAAAGTCATCTTATCCCAACGACCACTTTCAA TAGTTGCTGTTGCAATTGTTTTCTTAGCATCTGTGGTTAATTTTGCTTCTTTCATGATGA ATTTAAGATTATTCCAACCATCGTTAGACTTGGCGGCATCCAAAACAACTTGATTTAAAT TTGTTTTTACTTCCCCAGTTTTAGGGTCTAAAACTAAATCGCTCCAAGCTAAATCTGCTT TACTTGCGCCATCGCCAATTAACATACTAGCATCACTAACCCCGCCTGCAGCTTCTTGTA CATTACGAGTGAATTCGTCATAACTTAAACCCATTTCATCTAATGCATGTTTTATGTTCT TTTGAGCTACATCGCTACTTACACCTAATTTGTCATATAGTTGTTCTTGCGTTTTAATCC ATGCAGTAACACTTGAACGCACTGTACTATCGCGTTCCCTATCCATCTGATTTATAGAAT CGTTATAGGATTTTTTATCAATCAATCCATCATCATATGCTTTTTTTAGCTCTTTCTTTT GCTTACTTGTTGAGTCAATTGTTTTTTTGGTTATTTTGTTTAAGTAATCCGATTGTTCGA CAAGTGCATCCTGGTTAAGAGACTCAACTTCACCATTCATCGCTTTAATAATTTGCTTTT TCTTGCTTTCGTTTAATCCCAAGCTCTCTACTTGTTCAATTTGCATCGCTTTATAGATAT TATTAACTGTTTTGGATTCCTCAGATGTTAAGTTTCTGTGTTTATCAGCAGCCGATTTAT AGATATCTTCAATTTCTTTATATTGAGCATTAACATTCGCTTTACGTTCATTAGCTCTTT TCTCAGAGTCTTTCATTGAATTGTCTAAGATAGCTTGAACAGCAGGAGAAAATTCTTCAT ATGACTCTTTAAACCCATTTAACGCATCATCTGTGTTTTTCTTTATTTCATCTGCCATGT TTTTAAATGCGGTTACTACACGCTCGCTGTCATCTGTCGCACCTGTTGCAAAGGTATCTA GTGCTAGCTTACCCTCTGATGCAAATTCATTGAATTTACCCATCGACTTATCTGCCTCAG CACCAATATCATAACCCCATGTTTTTATACGTTCTTTGCTTTCTTCGATTTTGCTTATAT GTTTATCCAGTGCATAAATTCCTACACCAATCAAAGCCGCTCCTGCTAAACCAATTGCAG CTGGCAACGCTCCAAACGATCCCGCTAATCCTGCCGCTGCCAAACTAGTTCCTTCTACCG CTGTTGTAGTAGCCCCAAACCCAGCTGCCAAAGGAGCTAATTTACTCCCTAAACCTAAAA TCTTACCTAAGCCCGCGAATCCTTTTATTAATCCGCCAGTCATTGATACTAGTTTTCCGC CAATCATTAGCACAGGACCAGTTGCTGCTAAAATTCCAGCCCATTTTATGATACTTTGTT GTTGTGCGCCGGAAAGGTCATTAAATTTATCAATCATTTTGTTAGCCCACTCGATGATTG GAGTGAGGGCAGGCATTAATTTTTGTCCTACGTTCTGTTCTAATACTTCGAGCGAAGCTT TGAATTGATCCACACCAAATTTACCAGCTTTTCGCATGTTATCAGCAACTTGTTTAGTAT ATCCATTTGCTTCATCAGCGCCCTTAGAATATTTACGTAGAGAATCGCCTCCCGCTTCTA AAAGCGTATTAACAGCTGATAAAGGTTCACGTCCGAAAATCATCGTCAAGAAAGAGTTTT TCTGTGTTTTTGTCATTTTCTTTGTTTTATCATTAATATCATCCAAGAGAGTTGGTAAAG TTTTCATATTGCCGTTGTTATCTTCAATTGTTAATCCAACTGCCGACATTGCTTCTGCAG CTGATTTTGAAGGTTTAAGCAAACTTGTAAGCATTCCCCGTAAGCCGGTACCCGCCTTTT GCCCTTCAATACCGCGGTTAGAAAGCAAACCAACAGCTGCTGCTGTATCTGTAAGTGAAT ATCCTAGCGAATGCGAAATAGGACCGACATAGTTCATTGCTGTTCCCATATCAGAGAATC CAGCCGCTGTTTTATCAGCTACGTAGGTTAGCACGTCAGCAACTTTGTTTGTGTATTCCA TCTGCTTATTTGTATCTTTAGAAATCATTCCAAACTGTTCTAATGTTGATGTTGTAACAG ACATTACTGTTTCGAAATCATCGCCAGATGCACGAGCAGCATTAAAAATCGCAGGCATAG ACGCCATTGTTTGATTAATATCGTAGCCTTTTTTAACCATTTCTTTCATACCGAGCATAG TTTGTTCAGAAGCTACCCCATACTTAACACTAGCTTTCTGTGCATAATCAAAGACTTGTG TATAACGATCGCCAAACTCTTTCGCTGATTCATCAGATTCACGCAATAAAGAGTTAACTT CTGTCACTTCATTATCAAAATCAAGATACGCTTTAGTTGATTTCACCATTCCCGCTACAA TTGGCGCCGTAAATCCAACGGTCATCGCGGTTCCAGCTTTTGTTAACTTTTGGCCAGACT TTTCAAGCATATTTCCGAATTGTTCAACTTTGACGATAGATGAATCAAGACCTTTAATAT TAATGTTTTTCTTATTGATTTTGTCGATATTGTCAGATGCTTTTTGCCCTTTCTTCGCAA AATTATCCATATCCTTATCGATTTTGTTCATCTGGCTTTTATAGCCATTTTCGCGTATTT TTATATCGTAATAAATTTCTCCCGCTTTACTCATATTTTCACCCCTCTTTCAGCTTGCTG TTAGCTCTCAAAGCCTTTTCTAATCCTTCTTCATTAGAAGCAGCATCCTCAAAATATCCA CGCTTTAACATGATTCGATTTTGCTTTATTTTTTCTTTCAGCAAATGTTTTGGCACTTTG CTTCGTTCAGTCATTCGAATTTCAAGAGTTGTCATAAATGGCGTTTCCCCACCTAAATTC ATTAGATATGTCCGGAATTCTGAAAAAGTCATATTTGACAATTCTTTGCGCAATCTGATA CCGTAATACGCCAAAAAAGAAGACTCGATTAAATCAAAGTCTTCAACTATTCCGTAATAC TGTTTTCCTGTGGCTTCCCCTCGTCACTTTCCTCGCTCATATCGCTTTCAAATAATTTAG CTATAATGTATTCAATAAGCCCCTCGTAGACTTTAGTTGGCAATGTTTTAGAATTGATTT CTTCTCTGTCTTCTTTGCTGAAAAAAATAGCAAAAATATCATCGTTCGTTGCTACAATTC CATCTGTGATAGTCATTAACAATTCATGCATGTTTTCACTATCCGGCGTTGTATGCTCTC CATCGCTTTCGTCGCCTTTCAATTTAGGCGCAAGAACTTGTCCTAAAATTTTAGGTGCTT CATCCAAAAGCGCACTGTATTTAATGTGTGCTTGTGCCGAAATGTCCGCATAATACTTTT TCCCGTTAATTTCCAAAGGAAGTTTTACTTCATTCTCGTTAAAATTAAATGATTTCATTT TTGTCCTCCAAATTAGTAAAAGCCCTCACTCAGAGGGCTTCGTATTTTGTTTATTAGGCA GATGTTACAGAAACAGAAACGTCATTTTTAACCGATGGTTTCACTTTGGACGCAATTGTG ATTTTAATTGCAGTTACTGTTGTAGCAACTCCTGTTAAAGTTCCATCACTAGCTACTGTT GCTTTTGCTTCATCAGATGAAGTGAATGTTACATCTTGTGGAGCTCCTGATGGCAGTACT CCTGCTGTAATTTTAATAGTTTCTCCAACTTTTACAGTTTTAGAGGCGCTATCTACCGTT ACGCTTGTTGGCTCAATGGTAGGCGCCGGCGTATAAACCGGCGTACCATTTGAATTCTGT GTGGCAGAAAATGAACCAATATCGTTCGCACCACCACCACCGAAATCATTAATCCCGATT GGTCCAGTGATTTCATACTTAGAGCCTGCTGGGAATTTAACTACAATTGTTTTTTCAGCT TCAGACCCAACTTTATCCCAAGTTTCACGTAATTCATTTTGTCCTGGATCTGATTCATTG TATTTCCCATCCAAACCTAACTCCATAGCAGCACCTGTTTTTACCGCACGTTCAAATACC TCACCAATTGTTGTATATTGTTCCACATTTGAGTTCAGTGAAATGTCTAAAGTTTCTAAG TCTTTGATCGAAACACCATCTCCGCTTTCCCCTGAATCTTTAACCGAAATTTCTAATTGT TTAACTGCATAAGTTGCCATTAACTTACATCTCCTTTTCAAATAATATTGTTAGTTGATA AATCAAACGACCATCATCGTCATAATCGACTTGTCCGCCGCTTGCTACATCTGTTGCTAC TACCTTCTGATTTTGGATATTCAGCTCAGAAGGGTTTGTTAAAAGAAAGTAGTTACGTAA TAAATCGTATGTTCGTTTGCATTGAATTGTGTTTTTGTCATAAATTAAAAAGCCGATGCT CTCACGAACACGACTTTGCGTTTGTACTTGCTTGTTTTGAAATGTCGGTGCTTCATTAAT TACTACCATTGAATCAAGCCCCGTTTGTTTAATGAATCCAAGTGTTTTTATAGCTGGGAA TGTTTTTTTGAAATGTGCTACCAAATCTTCAATCATAAACGCATCCCGCCCTCTACAATT TGGTTAATACTCTGAATTCCATAACTTACAGCCATTTCGTACCAACGTGGATTCCGACGA TTTTCATAATATTGTCTGCGGGCATAAGGAGTTAAACTAAACACTCTAGCTACAATTGAA TTTTTTTGGATGATAATTTTAAAATACGAACTTCGTCGTAAGTCTCCATACAAAATCGGA GTAACAGGCTGTGCTAATTCAACCAATTCTCCCCCAGCCTTTGCAGCCGTTGACAAAGCT TTATTATGAATATCATCTATGACTGCATCTTTAAAACTACTAAAGCTCATGCTCTGTCAC CTCTCCTACAACAATTTCGAAATGGTGAATACTTCCATCAGGATTTGGCGGGAAAGATAC GCTCTGGACCTCACCTTTAATTAAACAATAGTCAGGAATTACAAAAGATACATTGTCTCC TTCACTCACAACAAAATTTAATTTGTTACAAAATAAATTAACAATATATCTTATGTTTAA CCCTTCCTCTGTTTTATTTACGAGCTTTTCAAACTCATAGCGAAACATTGATTTATTAAT TGCATCTGGTAAAAGATTTCCAAAGTCATCGCGCCCACTATTACTAGTTATAGTAACTTC TGTGTTTAGGATAGCCTCGGGAATAGGCGGTAATTGAAAGCTCATTAACAGCCACCTACT CCCGCATAAAGCCAGCCACTAGATAAAAGCAAATCCATCACTTTGTCCGGAACGTCAGGT ATAAAGTTGTTCGAATTTTGTGATTGACCACCCATAGTTAATTTGCCTAGTGTAAAGTTA CCAATGCCAATAAACTCACCATATTTCTTGATGTGTTCACACTGCCATGCAACAGCTTGC TTAATATCATCATCTACATTGTCAAGGTCTACGATATTCGGCATAATTTGCTTGTCAATT GCTACAGAAGCGGCTTTTATTAAATTATCCGCTTCTGTTGGTTCGATACTTAAGTTTGTT AGACTAGCTAACTCACTTGGTGTAATATACGTTTTCATTTACTCACCCTCTTTATTTTTG GGCTCCTTTTTACTCTTGGGTGGCGATTTTTCTGGTTCTTTTTCTGGTTCTTTATACTCG AACTCTTCAAAACCATCAATTTTCAATTGATTGATTAATACAACATCGTCTGTATTGTAA ACGACATTTTCTTTTTTTAATTGCATTTCCCTAACCTCCTTAGACTTCTGTAGAAGCGAT TACGCCATCTTTTTGTTGGTCCAACACAAAAATGTCGTGGTATACACGATATTGATACAA CCAGCCGTCCCCTTGTCCTACAGAGCCGGGTGCGTGCAAATAGATAGAAGCATGTTTAGT ACCGCCAATAACAGAACCTTTATTAATTAGTAAATAATTAAGCTTCTTAGCGCCAGGCGC TGGTGTATAACCATCCGTAAAATCAAAAGTATCATAGAAACGATCTTCTGCTTCAACTTC AACAAGTTTAACTCCATCAATTCCTGTAATGCGCGTTTCTAAGCTAGAAGGCCCAATATT TTGATTAGAGATTGTTCTAGTAAAGTCTTTACTTAGCTCTAATGCAGCCATAACGTCTGG TGACACATACATAACAAGATTTTGTGTACCGTATTTTTTAACTTTTCGAATAGCTGCTTT AAGTGTACGAAAAACATTTTCTTCTGTGATTGCTTCGTCAGCAGAATGACCATTATTTTT AGCCGCTGTCGCTAACTTAGAAAAACGATAAGCGTCGACTTCTGGCGCAGCGTGCGCTGA ATTAAATTCTTTTGTTACATTAGCAGCTGTTAATGCTTGCCCTGTTTCATCTACATCCAT AACATCTACAAAAAACTCTACATCTCTATCAAACGTAATAGTATATGGAGTATTCGTATT TGATGCCGAACCTTCGTTATATCCTTTGTTTCTAGTGTGCGGTTTTAGTCCAGTTGTTGA AATCGTTTGTATTTTAAACGTTTTTGCATCTAACCATAAAAGGTTAGGTGTTTCTAATTC ATTTGTGTAAGTGCCAAAGACTAACTTCTGGTCGAGCTCCTTACCGTACTTGTCTACATA GTTAATAGCCATTTTGCTATCTCTCCTTTTCTAATTATGAATTTAATGCTTGAATGAATG GGTCTGTAGCACTTGGCTCACTTGCATTGCCTAGTCCTGCTCCGATTGGTGGAGGCGTGT CACCATCATCAGATTTTGCAATCCATTCCGGATATTGCTCTGCGAATTTCGCTAAGTTGT CGTCATTTCGCTCTTCATCCCCAAAAAGCTTCGTAAACGCTTCGTAACGTTCTTCTTTTA CGCCGCTTTCTTTTAACTTACTGTGCCACTCTGCCGTTTGTTCTTTCTGAACATATTCAT CCAGCTTTGATAGTGCCTCGTCTTTCTCTTTTTGAAGTTTTTTCAATGCCTTTTCAGATG AATCATGTTCGCCCACTTGGTCGTTAAGCTGATTAATTTGGTCGTTTAACTTCGTGATTT CTTCCTCATGCGCGCTTTTGATGGTTTCAATCTCTCCATTAAATTTCTTTTTTTCAGCCG CTAAGCGATTCTTTACAATTTCATCCAGTTCTGCTTGGGTAAAATTCTTATCGTTCCCAC CTTCAGCAAAATGTTGGATGTCAAACTTACGCTGTAAATAATTCTTCATATTTCCTCCTT TTTAAGCTCTGAGTGAGCCATCCCTGTCTATTAGTTGCCGGCAGGTAGGCAAAATTTTTA TATCAAGCCAAACAAAAAAAGCGTTCATTTAGACGCTTTTATAATTTCTCTATCCAATTC TCTCTCTAAGAATCGATTGTTATTCAAATGGCCTTGCAAAGCTTCTTCCCATTGCCTTAC TTTCCCAGCTGTATATTGTTTAGAAGGACCTTCTGCAAGTATATCTTTTGTTTTCCAATC GCGAATTCCGCGCTCATAGTACCGTTGCTTACTTTGAGCCTCATATTCTTCTTCATCATA TGGTATAGGCTCGTCTGTTTCGTCACCTTCGAAATAAGAATATAAAAAATGGTGGCAATT TGGATGAAACAAGCCATCGTTTTCCGCTTCTTGTAATGTTTTATATTCATTGCTTTCGTA GTTAACTGATAGCACTTCTCCTTGCCAAGGAGCACAACGCGGACAACTTCTTACGTGAGC TGACACTTGAACTAATTCGTGCTCATATCTTCCAAGAACGCGTTTCATGGCATTTAAACC AACATTAAAAAAAGCACCTCTTGAAGCCATTTCCATGTAAGCTCCTGGTCGGTACTTTCT TCCAGACTGATCTATAACATTTCTTATGCCATCACCTAAAACATTAATAAGTGATGTTGC GATAGCATATTTTAAAATTCCATTGTTATCTTTTGTTTCCTTAACAACTTGCTTGTATTT GGAGGGCGCGATTTTTTGCCAATAATTAGCAATGTCTTCCGAAATTTGGATAAGTGCATC ACTTTCAGATAAATAGTCGTCATTTTGTATATCAACCTCTTTCTTAGTTTGATATCTGGC TTCCATTTCGTCCTCGTATTCATTCACGCAATCAAGATAAACACGATACGTTAGTTTATC TATTTTATTTCTCGTTTCGTCTTTGAAAATACTTATATGTGCTTTCAATTCTCTTTTAAA CCTTATCAAACGCGACTGCTGAATGAATTTCCATTTTGTTGGATTCTTAGCGCCATACAT AACATGCTTCTTTATCAGCAAAAGTAATTCTATTTCGGCATTATTAAAGTGGTTTCGTAA GATAGATGCTTCTTTTTCGAAATCCACTGGTGCATGGTGATGACTCATCTAATCACCCAC CTTTCGTTTCCATTCCTCCAATTGCTTCCGGGTCCGGAACCTCTCCAATGGCGTTTTCTA AATAGATGCGTTTTACTTCCGCTTGAATTTCTTCATCTTCCCACTTAGGGTGAATTAGTT TCACCTTTTCTTCTACACTCATAGCTAATGCACTGTTCATATTATTTAATGTGCTAGATA ATTCATTCAGATTAACAGACATTGGATCTGGAAACTCAATTATTACCCTGATTTCATCAC GCATTATTGCTTTTTCTTTATTGTTTGTTCCGCCAGTTAACAAATATAGGAAGTCCCAAA GCATCTGTTCGTAAACATTTTGAATAAGGCGTTTTTTCTTCTCAATTTTACGCACTGTCG CGTCTTGTAAACTCCAAATTTCGGTCGCCTTAACTTCTCTATTACCTAGATTAAAAGTAG CGGGATTATAACCAGATTTCGAAACAGCTTTCTGAGCAAAATATTCCATCGTTTCGCGAT AACTACCGTCTCGGAAGTCTCCTTGCATGAATTGAATCATATCATTTAACTTCGCACCAG CATCCAACGTCCCTTTAAACTGCATAAAGTAGTCTTCATCTACATTCATGGACCATTCTT CTTTATCTGTGCTCTTATTAACTTTTTTCCTAAACATTCGCTCACTAGCCGCTATTTTTG TTTTTGTTTTCTCACCTTCGCGCATATAAACAGTGAAAAAGTAATCTACGGCAAATAAAT AATTGGTACATTGTGATAAGTCCGATTCCCCAAGATTAAGATGTGGGTATCTAGTATTGC TAGGACTATTATTTATTAAATACGCGCCCATACTCTTTAAACCAATTGATACAGAATGAT TCAATTGAATATCATTTGTGTACAGATAGCTTGTAATCTGTTCTGGTAGTCTCTCCGCAC TGATAGGAGTAGTTTTATCGCCATCGATTTTAATAACAGAATATGTTACAAAACCTCCAG ATAATTTCTTCCCTTCCTTGTCCCATTGTTTTATTTCTCTGCTTTCAACTAAATAATAAA TATCTGCTTTATTACTTGTGGGTATTTCCTCAAAGAAATTAAAACGAAATGGCTCATTGT TTTTAAAATCTATCCAAAATTGGCTGGAGCTATGAACGCTAAGAGATGGTCGCCCATTTA AAATGTTAATCTTTACAGCGGATACTCCGCTCCCCCCTGCTAATTCAACAATTTTCACGC TCTTACTATCAAAATTATCAATCCGTAATGCTTCTTTCAGTTGCTTTGTTAAGTTTTCAT CCTTACTGCCATTAACCCCTGTTACATCAATACTTAAAGGCTTTCCAGATATATACTCAG CCGCAACAACAACTATCTCATTGCCTGTTCCGGAATTCATTAACTTATCGTGCACTGTTG GCACATATCCTTGAGCCCACAACGAAGTTAAATAGGAGTCTTTGCTCCATTCTTTTTGAT TATCTGGAATGAGCGGCAGATATCTTGGTATTAACTCCGGTTCGCTGCCGTTAGGTTTTC CATTTAGCCAACCTTTAATAAAGCGTGTCATTACACTCCAAACACCCATTTAATCACTCC TTTCTATATATCTTCATAATTCCTATAAAAGTAGTTTGTAGCATATCTGCTTGTATCCAT CGCATGATTATTCTTGTCAACTGGTTTCCCGCTGTTTTCGTCGCGTACATACATACCCAT TTCTTGCAGCCAGCCATAATTGTCGTATTGATCATTGAGTTGTTCAACAAGCAAATAACG CCTTTCGCTTAATAGCGACTGCATCCGCTCAATTCCAACTTCAATTCCTTGCGCTTTACC TGTCACATCATGAGCATTGTTGTCTGCTCCTGCTGTATCAACACCAACCTTTTCCAGTTC TTCACGTAGCCAGCGACAGGCAGGGTCAATAAAAACAGGCTCATTTACTGGTACTTCATA CTCTTTCATACACCATTGAATGAATTGTTTTATCTCAACGGCATAGGTTGAACCAGCTTT TACTTCTCCTGTATCCCTACCACTGTGATAATAGGATGCAACTTGATTAAATTTGTATTT ATAATGTCCGTCAGCCGCATGCTCTGTAATTACATAGCACTCACAAACAGTAGCATCTTG TTGTCCTCCATCACCAAAAAAGACCATCTCAATTGGACGACCTTCTAATTTGG
Region | 1 |
Region Length | 13.9Kb |
Completeness(score) | incomplete(10) |
Specific Keyword | NA |
Region Position | 1-13973 |
# tRNA | 0 |
# Total Proteins | 14 |
# Phage Hit Proteins | 14 |
# Hypothetical Proteins | 0 |
Phage + Hypothetical Protein % | 100% |
# Bacterial Proteins | 0 |
Attachment Site | no |
# Phage Species | 1 |
Most Common Phage Name(hit genes count) | PHAGE_Lister_A006_NC_009815(14) PHAGE_Lister_vB_LmoS_188_NC_028871(13) PHAGE_Clostr_vB_CpeS_CP51_NC_021325(3) PHAGE_Strept_SV1_NC_018848(2) PHAGE_Bacill_PBC1_NC_017976(2) PHAGE_Gordon_GMA1_NC_030902(1) PHAGE_Lister_vB_LmoS_293_NC_028929(1) PHAGE_Lactob_J_1_NC_022756(1) PHAGE_Lister_A500_NC_009810(1) PHAGE_Strept_315.4_NC_004587(1) PHAGE_Strept_PH15_NC_010945(1) PHAGE_Bacill_IEBH_NC_011167(1) PHAGE_Temper_phiNIH1.1_NC_003157(1) PHAGE_Lister_LP_101_NC_024387(1) PHAGE_Bacill_250_NC_029024(1) PHAGE_Lactob_Lj928_NC_005354(1) PHAGE_Lactob_PL_1_NC_022757(1) PHAGE_Paenib_Tripp_NC_028930(1) PHAGE_Lister_LP_030_3_NC_024384(1) |
First Most Common Phage # | 14 |
First Most Common Phage % | 100% |
GC % | 37.37% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
Questionable (score 70-90)
Incomplete (score < 70)
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Score: | The score of the region based on the above criteria. |
# Total Proteins: | The number of ORFs present in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NZ_QUPD01000015.1| Listeria monocytogenes strain CFSAN028785 AFX46_15, whole genome 13973, gc%: 37.37%
Download details as .txt file: detail.txt file_download
Hits against Bacterial Database or GenBank File
Region 1, total 14 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | complement(1..1358) | PHAGE_Lister_A006_NC_009815: gp16; AFX46_RS08105; phage(gi157325430) | 0.0 | Showinfo_outline |
2 | complement(1355..6154) | PHAGE_Lister_A006_NC_009815: gp15; AFX46_RS08110; phage(gi157325429) | 0.0 | Showinfo_outline |
3 | complement(6159..6470) | PHAGE_Lister_A006_NC_009815: gp14; AFX46_RS08115; phage(gi157325428) | 8.83e-60 | Showinfo_outline |
4 | complement(6467..6898) | PHAGE_Lister_A006_NC_009815: gp13; AFX46_RS08120; phage(gi157325427) | 4.59e-100 | Showinfo_outline |
5 | complement(6954..7640) | PHAGE_Lister_A006_NC_009815: Tsh; AFX46_RS08125; phage(gi157325426) | 5.47e-159 | Showinfo_outline |
6 | complement(7645..8016) | PHAGE_Lister_A006_NC_009815: gp11; AFX46_RS08130; phage(gi157325425) | 7.42e-87 | Showinfo_outline |
7 | complement(8013..8330) | PHAGE_Lister_A006_NC_009815: gp10; AFX46_RS08135; phage(gi157325424) | 4.93e-73 | Showinfo_outline |
8 | complement(8320..8685) | PHAGE_Lister_A006_NC_009815: gp9; AFX46_RS08140; phage(gi157325484) | 8.74e-84 | Showinfo_outline |
9 | complement(8685..9038) | PHAGE_Lister_A006_NC_009815: gp8; AFX46_RS08145; phage(gi157325483) | 6.62e-82 | Showinfo_outline |
10 | complement(9220..10092) | PHAGE_Lister_A006_NC_009815: Cps; AFX46_RS08150; phage(gi157325479) | 0.0 | Showinfo_outline |
11 | complement(10115..10669) | PHAGE_Lister_A006_NC_009815: gp5; AFX46_RS08155; phage(gi157325467) | 2.76e-131 | Showinfo_outline |
12 | complement(10765..11808) | PHAGE_Lister_A006_NC_009815: gp4; AFX46_RS08160; phage(gi157325456) | 0.0 | Showinfo_outline |
13 | complement(11813..13369) | PHAGE_Lister_A006_NC_009815: gp3; AFX46_RS08165; phage(gi157325445) | 0.0 | Showinfo_outline |
14 | complement(13384..13973) | PHAGE_Lister_A006_NC_009815: TerL; AFX46_RS08170; phage(gi157325434) | 9.20e-140 | Showinfo_outline |
>complement(1..1358)
ListeriamonocytogenesMSLGFTYKGIHSFDKHVEIIDIKPPLFPQNEGNTESVSGRIGAFYFGPNVGQRGIQLEIQIIGDSLKELSERATSVADWLMQVDAEERSLVIDDAPEKTYYGRFEGPTDLDRLLYNGRATLNFVCSDPYVYYEQEEFELTSESNKLPVRGSQPTSPVIGAVIKQDVTYIAVSNKEDYLYIGEGVDPDSGETPVKPSEIILNDPMNVLATWTPMKQSDLTFQLDANNGIIDGSFTSTANVFRASDYGVGAQWHGPMSKVVLPQAQDNWRVRMRLQNIASAQKQQGKLEVYLVDEKGAKIATFQIKDNAANTEVNIVKISIGDQNVANYPEKDLFNEAGKVTKTYKTVSTRKKVNGKYKTVTEKVQTGAYNEYRDFYGYFILTKIGNQFTAEIIKLDSNIKPVWTKKKVFVDTANKYTKKLAQLNIYAAASGTHDPNRDLFFTDTLVEKLNIVA
>complement(1355..6154)
ListeriamonocytogenesMSKAGEIYYDIKIRENGYKSQMNKIDKDMDNFAKKGQKASDNIDKINKKNINIKGLDSSIVKVEQFGNMLEKSGQKLTKAGTAMTVGFTAPIVAGMVKSTKAYLDFDNEVTEVNSLLRESDESAKEFGDRYTQVFDYAQKASVKYGVASEQTMLGMKEMVKKGYDINQTMASMPAIFNAARASGDDFETVMSVTTSTLEQFGMISKDTNKQMEYTNKVADVLTYVADKTAAGFSDMGTAMNYVGPISHSLGYSLTDTAAAVGLLSNRGIEGQKAGTGLRGMLTSLLKPSKSAAEAMSAVGLTIEDNNGNMKTLPTLLDDINDKTKKMTKTQKNSFLTMIFGREPLSAVNTLLEAGGDSLRKYSKGADEANGYTKQVADNMRKAGKFGVDQFKASLEVLEQNVGQKLMPALTPIIEWANKMIDKFNDLSGAQQQSIIKWAGILAATGPVLMIGGKLVSMTGGLIKGFAGLGKILGLGSKLAPLAAGFGATTTAVEGTSLAAAGLAGSFGALPAAIGLAGAALIGVGIYALDKHISKIEESKERIKTWGYDIGAEADKSMGKFNEFASEGKLALDTFATGATDDSERVVTAFKNMADEIKKNTDDALNGFKESYEEFSPAVQAILDNSMKDSEKRANERKANVNAQYKEIEDIYKSAADKHRNLTSEESKTVNNIYKAMQIEQVESLGLNESKKKQIIKAMNGEVESLNQDALVEQSDYLNKITKKTIDSTSKQKKELKKAYDDGLIDKKSYNDSINQMDRERDSTVRSSVTAWIKTQEQLYDKLGVSSDVAQKNIKHALDEMGLSYDEFTRNVQEAAGGVSDASMLIGDGASKADLAWSDLVLDPKTGEVKTNLNQVVLDAAKSNDGWNNLKFIMKEAKLTTDAKKTIATATIESGRWDKMTFNEKKLIVSYEDSIHVANALSDLGIWDKLKPEQKSMIANADTSLALQKALQDMGVWDKLPPSMKTLVVDNSDVIKKMNSSKGMLVSYNGTNVDLKTLLANDFDVRKKIQNGKDVIVQYNGQKVNLKTLFANNRDLLSKIDRGSRTVNDYNNIAIHRKDLVINSNAEATKNAIDNAINSWRDMLNMKNQKVISIAYKTSGKSPSGIQEVGYARGTNNHKGGPALVNDAKGSNYEEMITTPDGKSFVPKGRNVLLDLPRGTEVLRGDKTAKALSNVPRYAKGTKTSYAKNVSNKISNVQVDYKTGAISAQSYINKLKQINKQYRLNAAQTRQIKLNIAGANKEINTQKTKLNKSIKSSAQKYYDNVAKINKTAKDSINEAKKTYKDALKSNQEAAYNQTGLFDAAVTEKSSGSELTKNLKSQTAQQKDFMAQLDKMKKRGVSKGLIDEIRNMGVSATGQAKAIAGMSDTQLKQYQAEWSKKHANANKLGLDASVNDKVAMDKAVKAANDKAKKDLANANASWLKELDKAKEYRTAGSKLGVQTVAGIIQGFKQMNGPLEKQADQLAKTIESTIKKRLKIHSPSRLMSDEVGEQVPAGIGVGMLKNLNTIDLAAHKMQKHLTSLSPAISVPVTPNTKEITAYSGASIATQGSGNPVTVQPIQIVNKTMLEGRIVAEETVDFITEIQNNRIIRTNRAQGVIL
>complement(6159..6470)
ListeriamonocytogenesMVEDFDLIESSFLAYYGIRLRKELSNMTFSEFRTYLMNLGGETPFMTTLEIRMTERSKVPKHLLKEKIKQNRIMLKRGYFEDAASNEEGLEKALRANSKLKEG
>complement(6467..6898)
ListeriamonocytogenesMKSFNFNENEVKLPLEINGKKYYADISAQAHIKYSALLDEAPKILGQVLAPKLKGDESDGEHTTPDSENMHELLMTITDGIVATNDDIFAIFFSKEDREEINSKTLPTKVYEGLIEYIIAKLFESDMSEESDEGKPQENSITE
>complement(6954..7640)
ListeriamonocytogenesMATYAVKQLEISVKDSGESGDGVSIKDLETLDISLNSNVEQYTTIGEVFERAVKTGAAMELGLDGKYNESDPGQNELRETWDKVGSEAEKTIVVKFPAGSKYEITGPIGINDFGGGGANDIGSFSATQNSNGTPVYTPAPTIEPTSVTVDSASKTVKVGETIKITAGVLPSGAPQDVTFTSSDEAKATVASDGTLTGVATTVTAIKITIASKVKPSVKNDVSVSVTSA
>complement(7645..8016)
ListeriamonocytogenesMIEDLVAHFKKTFPAIKTLGFIKQTGLDSMVVINEAPTFQNKQVQTQSRVRESIGFLIYDKNTIQCKRTYDLLRNYFLLTNPSELNIQNQKVVATDVASGGQVDYDDDGRLIYQLTILFEKEM
>complement(8013..8330)
ListeriamonocytogenesMSFSSFKDAVIDDIHNKALSTAAKAGGELVELAQPVTPILYGDLRRSSYFKIIIQKNSIVARVFSLTPYARRQYYENRRNPRWYEMAVSYGIQSINQIVEGGMRL
>complement(8320..8685)
ListeriamonocytogenesMSFQLPPIPEAILNTEVTITSNSGRDDFGNLLPDAINKSMFRYEFEKLVNKTEEGLNIRYIVNLFCNKLNFVVSEGDNVSFVIPDYCLIKGEVQSVSFPPNPDGSIHHFEIVVGEVTEHEL
>complement(8685..9038)
ListeriamonocytogenesMKTYITPSELASLTNLSIEPTEADNLIKAASVAIDKQIMPNIVDLDNVDDDIKQAVAWQCEHIKKYGEFIGIGNFTLGKLTMGGQSQNSNNFIPDVPDKVMDLLLSSGWLYAGVGGC
>complement(9220..10092)
ListeriamonocytogenesMAINYVDKYGKELDQKLVFGTYTNELETPNLLWLDAKTFKIQTISTTGLKPHTRNKGYNEGSASNTNTPYTITFDRDVEFFVDVMDVDETGQALTAANVTKEFNSAHAAPEVDAYRFSKLATAAKNNGHSADEAITEENVFRTLKAAIRKVKKYGTQNLVMYVSPDVMAALELSKDFTRTISNQNIGPSSLETRITGIDGVKLVEVEAEDRFYDTFDFTDGYTPAPGAKKLNYLLINKGSVIGGTKHASIYLHAPGSVGQGDGWLYQYRVYHDIFVLDQQKDGVIASTEV
>complement(10115..10669)
ListeriamonocytogenesMKNYLQRKFDIQHFAEGGNDKNFTQAELDEIVKNRLAAEKKKFNGEIETIKSAHEEEITKLNDQINQLNDQVGEHDSSEKALKKLQKEKDEALSKLDEYVQKEQTAEWHSKLKESGVKEERYEAFTKLFGDEERNDDNLAKFAEQYPEWIAKSDDGDTPPPIGAGLGNASEPSATDPFIQALNS
>complement(10765..11808)
ListeriamonocytogenesMSHHHAPVDFEKEASILRNHFNNAEIELLLLIKKHVMYGAKNPTKWKFIQQSRLIRFKRELKAHISIFKDETRNKIDKLTYRVYLDCVNEYEDEMEARYQTKKEVDIQNDDYLSESDALIQISEDIANYWQKIAPSKYKQVVKETKDNNGILKYAIATSLINVLGDGIRNVIDQSGRKYRPGAYMEMASRGAFFNVGLNAMKRVLGRYEHELVQVSAHVRSCPRCAPWQGEVLSVNYESNEYKTLQEAENDGLFHPNCHHFLYSYFEGDETDEPIPYDEEEYEAQSKQRYYERGIRDWKTKDILAEGPSKQYTAGKVRQWEEALQGHLNNNRFLERELDREIIKASK
>complement(11813..13369)
ListeriamonocytogenesMGVWSVMTRFIKGWLNGKPNGSEPELIPRYLPLIPDNQKEWSKDSYLTSLWAQGYVPTVHDKLMNSGTGNEIVVVAAEYISGKPLSIDVTGVNGSKDENLTKQLKEALRIDNFDSKSVKIVELAGGSGVSAVKINILNGRPSLSVHSSSQFWIDFKNNEPFRFNFFEEIPTSNKADIYYLVESREIKQWDKEGKKLSGGFVTYSVIKIDGDKTTPISAERLPEQITSYLYTNDIQLNHSVSIGLKSMGAYLINNSPSNTRYPHLNLGESDLSQCTNYLFAVDYFFTVYMREGEKTKTKIAASERMFRKKVNKSTDKEEWSMNVDEDYFMQFKGTLDAGAKLNDMIQFMQGDFRDGSYRETMEYFAQKAVSKSGYNPATFNLGNREVKATEIWSLQDATVRKIEKKKRLIQNVYEQMLWDFLYLLTGGTNNKEKAIMRDEIRVIIEFPDPMSVNLNELSSTLNNMNSALAMSVEEKVKLIHPKWEDEEIQAEVKRIYLENAIGEVPDPEAIGGMETKGG
>complement(13384..13973)
ListeriamonocytogenesKLEGRPIEMVFFGDGGQQDATVCECYVITEHAADGHYKYKFNQVASYYHSGRDTGEVKAGSTYAVEIKQFIQWCMKEYEVPVNEPVFIDPACRWLREELEKVGVDTAGADNNAHDVTGKAQGIEVGIERMQSLLSERRYLLVEQLNDQYDNYGWLQEMGMYVRDENSGKPVDKNNHAMDTSRYATNYFYRNYEDI
Questionable (score 70-90)
Incomplete (score < 70)
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ORF Start: 1
ORF Stop: 1358
Strand: Backward
Protein Sequence: MSLGFTYKGIHSFDKHVEIIDIKPPLFPQNEGNTESVSGRIGAFYFGPNVGQRGIQLEIQIIGDSLKELSERATSVADWLMQVDAEERSLVIDDAPEKTYYGRFEGPTDLDRLLYNGRATLNFVCSDPYVYYEQEEFELTSESNKLPVRGSQPTSPVIGAVIKQDVTYIAVSNKEDYLYIGEGVDPDSGETPVKPSEIILNDPMNVLATWTPMKQSDLTFQLDANNGIIDGSFTSTANVFRASDYGVGAQWHGPMSKVVLPQAQDNWRVRMRLQNIASAQKQQGKLEVYLVDEKGAKIATFQIKDNAANTEVNIVKISIGDQNVANYPEKDLFNEAGKVTKTYKTVSTRKKVNGKYKTVTEKVQTGAYNEYRDFYGYFILTKIGNQFTAEIIKLDSNIKPVWTKKKVFVDTANKYTKKLAQLNIYAAASGTHDPNRDLFFTDTLVEKLNIVA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08105, gp16, phage(gi157325430), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 0.0
ORF Start: 1355
ORF Stop: 6154
Strand: Backward
Protein Sequence: MSKAGEIYYDIKIRENGYKSQMNKIDKDMDNFAKKGQKASDNIDKINKKNINIKGLDSSIVKVEQFGNMLEKSGQKLTKAGTAMTVGFTAPIVAGMVKSTKAYLDFDNEVTEVNSLLRESDESAKEFGDRYTQVFDYAQKASVKYGVASEQTMLGMKEMVKKGYDINQTMASMPAIFNAARASGDDFETVMSVTTSTLEQFGMISKDTNKQMEYTNKVADVLTYVADKTAAGFSDMGTAMNYVGPISHSLGYSLTDTAAAVGLLSNRGIEGQKAGTGLRGMLTSLLKPSKSAAEAMSAVGLTIEDNNGNMKTLPTLLDDINDKTKKMTKTQKNSFLTMIFGREPLSAVNTLLEAGGDSLRKYSKGADEANGYTKQVADNMRKAGKFGVDQFKASLEVLEQNVGQKLMPALTPIIEWANKMIDKFNDLSGAQQQSIIKWAGILAATGPVLMIGGKLVSMTGGLIKGFAGLGKILGLGSKLAPLAAGFGATTTAVEGTSLAAAGLAGSFGALPAAIGLAGAALIGVGIYALDKHISKIEESKERIKTWGYDIGAEADKSMGKFNEFASEGKLALDTFATGATDDSERVVTAFKNMADEIKKNTDDALNGFKESYEEFSPAVQAILDNSMKDSEKRANERKANVNAQYKEIEDIYKSAADKHRNLTSEESKTVNNIYKAMQIEQVESLGLNESKKKQIIKAMNGEVESLNQDALVEQSDYLNKITKKTIDSTSKQKKELKKAYDDGLIDKKSYNDSINQMDRERDSTVRSSVTAWIKTQEQLYDKLGVSSDVAQKNIKHALDEMGLSYDEFTRNVQEAAGGVSDASMLIGDGASKADLAWSDLVLDPKTGEVKTNLNQVVLDAAKSNDGWNNLKFIMKEAKLTTDAKKTIATATIESGRWDKMTFNEKKLIVSYEDSIHVANALSDLGIWDKLKPEQKSMIANADTSLALQKALQDMGVWDKLPPSMKTLVVDNSDVIKKMNSSKGMLVSYNGTNVDLKTLLANDFDVRKKIQNGKDVIVQYNGQKVNLKTLFANNRDLLSKIDRGSRTVNDYNNIAIHRKDLVINSNAEATKNAIDNAINSWRDMLNMKNQKVISIAYKTSGKSPSGIQEVGYARGTNNHKGGPALVNDAKGSNYEEMITTPDGKSFVPKGRNVLLDLPRGTEVLRGDKTAKALSNVPRYAKGTKTSYAKNVSNKISNVQVDYKTGAISAQSYINKLKQINKQYRLNAAQTRQIKLNIAGANKEINTQKTKLNKSIKSSAQKYYDNVAKINKTAKDSINEAKKTYKDALKSNQEAAYNQTGLFDAAVTEKSSGSELTKNLKSQTAQQKDFMAQLDKMKKRGVSKGLIDEIRNMGVSATGQAKAIAGMSDTQLKQYQAEWSKKHANANKLGLDASVNDKVAMDKAVKAANDKAKKDLANANASWLKELDKAKEYRTAGSKLGVQTVAGIIQGFKQMNGPLEKQADQLAKTIESTIKKRLKIHSPSRLMSDEVGEQVPAGIGVGMLKNLNTIDLAAHKMQKHLTSLSPAISVPVTPNTKEITAYSGASIATQGSGNPVTVQPIQIVNKTMLEGRIVAEETVDFITEIQNNRIIRTNRAQGVIL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08110, gp15, phage(gi157325429), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 0.0
ORF Start: 6159
ORF Stop: 6470
Strand: Backward
Protein Sequence: MVEDFDLIESSFLAYYGIRLRKELSNMTFSEFRTYLMNLGGETPFMTTLEIRMTERSKVPKHLLKEKIKQNRIMLKRGYFEDAASNEEGLEKALRANSKLKEG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08115, gp14, phage(gi157325428), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 8.83e-60
ORF Start: 6467
ORF Stop: 6898
Strand: Backward
Protein Sequence: MKSFNFNENEVKLPLEINGKKYYADISAQAHIKYSALLDEAPKILGQVLAPKLKGDESDGEHTTPDSENMHELLMTITDGIVATNDDIFAIFFSKEDREEINSKTLPTKVYEGLIEYIIAKLFESDMSEESDEGKPQENSITE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08120, gp13, phage(gi157325427), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 4.59e-100
ORF Start: 6954
ORF Stop: 7640
Strand: Backward
Protein Sequence: MATYAVKQLEISVKDSGESGDGVSIKDLETLDISLNSNVEQYTTIGEVFERAVKTGAAMELGLDGKYNESDPGQNELRETWDKVGSEAEKTIVVKFPAGSKYEITGPIGINDFGGGGANDIGSFSATQNSNGTPVYTPAPTIEPTSVTVDSASKTVKVGETIKITAGVLPSGAPQDVTFTSSDEAKATVASDGTLTGVATTVTAIKITIASKVKPSVKNDVSVSVTSA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08125, Tsh, phage(gi157325426), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 5.47e-159
ORF Start: 7645
ORF Stop: 8016
Strand: Backward
Protein Sequence: MIEDLVAHFKKTFPAIKTLGFIKQTGLDSMVVINEAPTFQNKQVQTQSRVRESIGFLIYDKNTIQCKRTYDLLRNYFLLTNPSELNIQNQKVVATDVASGGQVDYDDDGRLIYQLTILFEKEM
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08130, gp11, phage(gi157325425), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 7.42e-87
ORF Start: 8013
ORF Stop: 8330
Strand: Backward
Protein Sequence: MSFSSFKDAVIDDIHNKALSTAAKAGGELVELAQPVTPILYGDLRRSSYFKIIIQKNSIVARVFSLTPYARRQYYENRRNPRWYEMAVSYGIQSINQIVEGGMRL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08135, gp10, phage(gi157325424), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 4.93e-73
ORF Start: 8320
ORF Stop: 8685
Strand: Backward
Protein Sequence: MSFQLPPIPEAILNTEVTITSNSGRDDFGNLLPDAINKSMFRYEFEKLVNKTEEGLNIRYIVNLFCNKLNFVVSEGDNVSFVIPDYCLIKGEVQSVSFPPNPDGSIHHFEIVVGEVTEHEL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08140, gp9, phage(gi157325484), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 8.74e-84
ORF Start: 8685
ORF Stop: 9038
Strand: Backward
Protein Sequence: MKTYITPSELASLTNLSIEPTEADNLIKAASVAIDKQIMPNIVDLDNVDDDIKQAVAWQCEHIKKYGEFIGIGNFTLGKLTMGGQSQNSNNFIPDVPDKVMDLLLSSGWLYAGVGGC
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08145, gp8, phage(gi157325483), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 6.62e-82
ORF Start: 9220
ORF Stop: 10092
Strand: Backward
Protein Sequence: MAINYVDKYGKELDQKLVFGTYTNELETPNLLWLDAKTFKIQTISTTGLKPHTRNKGYNEGSASNTNTPYTITFDRDVEFFVDVMDVDETGQALTAANVTKEFNSAHAAPEVDAYRFSKLATAAKNNGHSADEAITEENVFRTLKAAIRKVKKYGTQNLVMYVSPDVMAALELSKDFTRTISNQNIGPSSLETRITGIDGVKLVEVEAEDRFYDTFDFTDGYTPAPGAKKLNYLLINKGSVIGGTKHASIYLHAPGSVGQGDGWLYQYRVYHDIFVLDQQKDGVIASTEV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08150, Cps, phage(gi157325479), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 0.0
ORF Start: 10115
ORF Stop: 10669
Strand: Backward
Protein Sequence: MKNYLQRKFDIQHFAEGGNDKNFTQAELDEIVKNRLAAEKKKFNGEIETIKSAHEEEITKLNDQINQLNDQVGEHDSSEKALKKLQKEKDEALSKLDEYVQKEQTAEWHSKLKESGVKEERYEAFTKLFGDEERNDDNLAKFAEQYPEWIAKSDDGDTPPPIGAGLGNASEPSATDPFIQALNS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08155, gp5, phage(gi157325467), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 2.76e-131
ORF Start: 10765
ORF Stop: 11808
Strand: Backward
Protein Sequence: MSHHHAPVDFEKEASILRNHFNNAEIELLLLIKKHVMYGAKNPTKWKFIQQSRLIRFKRELKAHISIFKDETRNKIDKLTYRVYLDCVNEYEDEMEARYQTKKEVDIQNDDYLSESDALIQISEDIANYWQKIAPSKYKQVVKETKDNNGILKYAIATSLINVLGDGIRNVIDQSGRKYRPGAYMEMASRGAFFNVGLNAMKRVLGRYEHELVQVSAHVRSCPRCAPWQGEVLSVNYESNEYKTLQEAENDGLFHPNCHHFLYSYFEGDETDEPIPYDEEEYEAQSKQRYYERGIRDWKTKDILAEGPSKQYTAGKVRQWEEALQGHLNNNRFLERELDREIIKASK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08160, gp4, phage(gi157325456), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 0.0
ORF Start: 11813
ORF Stop: 13369
Strand: Backward
Protein Sequence: MGVWSVMTRFIKGWLNGKPNGSEPELIPRYLPLIPDNQKEWSKDSYLTSLWAQGYVPTVHDKLMNSGTGNEIVVVAAEYISGKPLSIDVTGVNGSKDENLTKQLKEALRIDNFDSKSVKIVELAGGSGVSAVKINILNGRPSLSVHSSSQFWIDFKNNEPFRFNFFEEIPTSNKADIYYLVESREIKQWDKEGKKLSGGFVTYSVIKIDGDKTTPISAERLPEQITSYLYTNDIQLNHSVSIGLKSMGAYLINNSPSNTRYPHLNLGESDLSQCTNYLFAVDYFFTVYMREGEKTKTKIAASERMFRKKVNKSTDKEEWSMNVDEDYFMQFKGTLDAGAKLNDMIQFMQGDFRDGSYRETMEYFAQKAVSKSGYNPATFNLGNREVKATEIWSLQDATVRKIEKKKRLIQNVYEQMLWDFLYLLTGGTNNKEKAIMRDEIRVIIEFPDPMSVNLNELSSTLNNMNSALAMSVEEKVKLIHPKWEDEEIQAEVKRIYLENAIGEVPDPEAIGGMETKGG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08165, gp3, phage(gi157325445), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 0.0
ORF Start: 13384
ORF Stop: 13973
Strand: Backward
Protein Sequence: KLEGRPIEMVFFGDGGQQDATVCECYVITEHAADGHYKYKFNQVASYYHSGRDTGEVKAGSTYAVEIKQFIQWCMKEYEVPVNEPVFIDPACRWLREELEKVGVDTAGADNNAHDVTGKAQGIEVGIERMQSLLSERRYLLVEQLNDQYDNYGWLQEMGMYVRDENSGKPVDKNNHAMDTSRYATNYFYRNYEDI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AFX46_RS08170, TerL, phage(gi157325434), PHAGE_Lister_A006_NC_009815
Homolog/Ortholog E-Value: 9.20e-140
Terminase
Portal Protein
Coat Protein
Tail Shaft
Integrase
Phage-like Protein
Other
Transposase
Plate Protein
tRNA
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