Submission Results
Sequence Name: Not Available
GenBank Accession Number: QUIF01000002.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: QUIF01000002.1.PHASTER.zip
gi|00000000|ref|QUIF01000002.1| Ruminococcus sp. AM45-2 AM45-2.Scaf2, whole genome shotgun 232282, gc%: 39.49%
Download summary as .txt file: summary.txt file_download
Total: 2 prophage regions have been identified, of which 0 regions are intact, 2 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 23.1Kb | incomplete | 50 | 18 | 117677-140776 info_outline | PHAGE_Brevib_Jimmer1_NC_029104(2) | 39.98% | Show info_outline |
| 2 | 18Kb | incomplete | 30 | 13 | 197458-215519 info_outline | PHAGE_Staphy_B166_NC_028859(1) | 41.14% | Show info_outline |
Region DNA
>1 117677-140776 AGCGGAATAAAAGTTCCGCTGCTTATCTCATTTCTCCATAGCTGATCTTATTTCTGCTCG CAGCTCTGGTTTCCTACTGTACAGGAAGTTTTACATGCGGACTGGCAGGAAGTCTGGCAC TCGCCACATCCACCTTTTTTTACAGTGTTCTGTAAATTCTTTGTATTCAGGGTTTTGATA TGTTCCATAACTCTATCCTCCTTATGTAATTATATTCTTGGCATAGTATATCATATATCT TTTCATTTTAAAAGCTTTTTTTTACGACAGCATTCCACCCAGTGTTCCACCGCCTGTGCA CATAAAAAATGTTGTAACTGCATGGGCTGCACTCATATCCCAGCCGCCTTTTGCCATAAC AGAGACAGTCAACAGTAATACATAGTAAGCCAGACCTGTGATAACACCCCACAGATATTT GTCTTTACGCACAATTTTGCCGGCCATAAAGCCTCCCATGAAACATGCAAGTACATAAAT TATAATAATCCCCGCATCTACAGCTGTTTCTCCCAGATCAAAAGCAAACAGTACCAGGGC CAAAAGCAGTAATGCCACTCCTGTTAATGCATATGCAAATAATAGTGATTTCAAAATTGC TCTGACTTTCATTGCTTCCCCTCCTGTTAAACTATATGGGGGAGGAATCAGTGTTATTCT TTTATTTCTTTCTCTTTTTTATAAATACAGCCACACCGGCGATCACTGCAGCTGCCACAA ACAGTATCACAAACGGCATAATTGATGTTGTATCTCCGGTATTTACTGTATTGTTATTTT TCACAGCTTTATTTTCCGTTGAATTATCATTCTGATCAGAAGAAGAACCATTATTGCTGT CAGAACTGTTATTCATAGATACTGTGTTGTTCTTTCCGGAATCAGAGCTCTGACTGTCGG AGGAAGCCGGTGCAGGAGTTACCGCATCTGTGTCGTCCGTATCATTCCCCGCATCAGGTC CTACTAATTGTCTGCTTCCTGCAATTCCAAATGGACTGAAAGAATGTGTGCTGAATACCA TAATACCATTCTCTACACTCGGAATAATCGTCTCAGTTGCCCCGTTATCCAGGAGATGTT CGATAGTATACTGATATCCGGATTTTACCGGCACAGTGACACTGATATAATCTCCATTAG GGATCTCATATTCTGTATTATTCTTAAGATCCCAGAGTTCAAATTCATAAGACTGGAAAA TCATTGCATCTGATTCATTGGTAAACTGATAGCTGTCACCGCTTGAAACTCTGAACTGTA CATACCATGGAAGATTAACTCCGCTTACTGTAATACCGTCGCAGGTATGATTAAGTGCGG CCCTCTCTTCTTTTTCTTCATCAGAAAGAGAATCCTCTGCATCTGTAGGACGGTCATCCT TATCGTCCGGCAGAACAGGATTATCAAAGATATTATCATCTGCGCCATCTTCATCATCTT TCTTCGTATCTTCTTTATCCTGTGTCATATCATCTGCAGGTTCCAGCTTACCGGTAGTTT CTGTATCTTTATCCGTCTTATCTGCATTGTTGTTATTATCTTTGTTGTTTTTATTATCTG TTTTATCTTCTTCAATCTTACTTTCTTCATTGTCTGTATCAGTTTTATTATCCTGATCTG ATTTACTTTCCTTATCTTCTTTATTGTCTGTATCAGCGTTTTCATCTGCGGCAGGTTTTT CTGACGAAGTTTCAGGCGTTTCTGTTGGATCTGCATTTTCTGTTGAATCTGTTTTACCTG AGCCTTCTGTCTTATCAGCATTATCACCATCCGTAATACTGTTCACTATTACATTGATGT AACCGACAACCGCGCCGCTCTCCGGATCCCATCCATCCACATGGCTTAAATCCTGCCCTT CTGCCGGTATAAGAAGTACCTCACAGCTCTGTACACGCTGTGCAGGAACGAAACTTCCAT CTGCCCATTCAAAAGTTCCATATTCCGTTGCCGGAAGTTCTACATCCGCAAGTTCTACAG GCTTATCAAGCGTGATGTTGTCCGGAATCAGAGAAGACACAGTATTCTCCTGTGACTCAG CCGCACTGACCTGTCTTGTTACACCCGGTATATTATTTCCTGCAATCAAAGCCGCTGTTA AAGCCGCTGCCGCAAAAATACCCGTTCCTTTTAATTTATTTTTTCTTATTCTATTTATAT TATTGGACATATCGCACCTCTATATTTATATTCGATTCTTATGTTTCCTGATAATCATTT TTTTACTTTCAGCCAAATATCAATTCTCTTTTTACATAATACAATAATATTACATATCTG TATATTATCAAACTTTTATCATTTTGTAAATATTCTGTAATGTTTTTTTTCATTTTAATC GAGTGAATTATAACACAAATCTTACTTTTTCGACAGTCCTCTTTTAAATTTTTTATATTA TCTTTGAACCAAAAGCTTTTTCTTGATTTTTTATATGAAATCATGTATATTTTGCTTAAA TGTTTTATGATATGATTCAATCAATAAAGATAATCAAAAGGAGTGAATAAATCTTGGATT CAAGTATTGCCTTTCAGGCGGTGGCGATTCTGATACTGATCGCACTTTCTTCATTTTTTT CTTCTGCGGAAACCGCTATGACAACCGTAAATAAGATTCGGATACAGTCTCTTGCCGAGC AGGGCAACAAACGTGCTGTTATTCTGGAAAAAATAATTTCCAATTCCCCAAAGATGCTCA GTACCGTATTAATCGGAAACAACATTGTAAATATGTCTGTTTCTTCTCTCATGACTACAC TCACCATAAAGATTCTGGGAAACGCATATGTAGGAATCACAACCGGCATCCTGACTCTGC TGATTCTCATTTTCGGTGAGATAACCCCCAAAAACCTGGCAACAATCCATGCTGAAAAAT TGTCCCTGGCCTATTCAAGAATAATATACGGGCTTATGATTCTCCTTACTCCCGTTGTTT TCATTGTAAATAAAATAACAGAAGGTGTACTGGTCATTCTGCATGTTAACCCGGACGAAA AGGCAAATGCCATGACTGAACATGAACTGCGTACCCTCGTCAATGTAGGTGAAAAAGACG GCGTCATTGAAAACGAAGAAAAACAGATGATCTACAATGTGTTTGATTTTGGCGATTCAA CTGCAAAAGATGTCATGATTCCCAGAATCGACATGACCTTTATAGATATCAATTTTTCCT ATGATGAACTTATGGCGGTCTTCAGTGAAGATATGCATACCCGTTTTCCGGTTTATGAGG ACAACACTGATAACGTAATCGGTATTATCAATATGAAAGATCTTCTTGTTTATCCAAAGG ACAAACCTTTTTCAATCCGCAACATCCTGCGTGAGCCTTATTTTACCTATGAATACAAAG CTACAGCAGACCTGATGATCGAAATGCGTAAAGCATCCGTCAATCTGGCAATCGTTCTGG ACGAATACGGTGCCACAGCCGGTCTGGTCACATTGGAAGACCTGTTGGAAGAGATCGTAG GTGAGATTCGCGACGAATACGATGAGGATGAAGTCGAAGATATTAAAGAAATCCAGCCTG AAAGAGAATATGTTGTTCAGGGTTCTGCCAAGCTGGATGATATCAACGAAGCCCTCCATA TTAATCTGGAATCTGAAGATTATGATTCTATTGGCGGATATATTATTGAACAGCTTGACT GCCTTCCCAAAGAGGGTCAGTCTGTCACACTTGAAAGTGGCATCCGCCTGGTTGTTGACC GTCTGGACAAAAACAGAATCGAACTTGTCCACATCTGGCTTCCCGAGAAGAAAACCGAAA CAGAAGAACAGCCGTAACTGTCATCTCTCCAGCATCAGTGAAAATTGTTTCACGATTCTG GAGAGTTCTCCTGTAACCGCATCAATTCCTTCTTCGTTCTTTCTCCAGTTTTCTCTGGTA ATTCCATCTGCATTCACAGGCACCACATAAAATTCTGTTTCCGGATACAAGAGCTGATAA TACATCAGACATCTTCTTGCATGGTAAGATTTGCAGCACAAAATTGCTCTTTCTATTTCC AGTTCTGCATGATCTGTCACCTGTCTGGAATAAATTGCGTTCTCATAAGTAAAGGTTGCC TGATCTTCTCTCAGGATTTTCTGATTCGGGACTCCGTTTTTTATAAGAACATCCCTGAGA AATTCCCATTCTGTTCCATATTCCTTATCATATACATTGCTTTTTTCAAGAACGCCTGAA AACTTTCCATTTACTACGCTGTATTTTCCACTGGGCAGAATCCAGTCCGCCATCCCTTTC TTAAACAATTCTGCTGCTTTTTCCGCCATCTGCGGATAACCATTTCCAGGGACAAAAATA ATATCAGATTTTTCCGGCTTGTTTTCTGCAAAAATAAACTCTTCTGAACCTTTTAAAAAT TTTTCATATACGTCATTCATCATTACTAACTCCTCGTTATCTGTTTTTTCTACAGCACCT CTCAAATAATGCGTTTGTAACAGTCCAACAGAATTTCACGCTCTGATGAGCCGGAACAAT ATGCATTATTTACGAAGATTTCCATGGAATTTCTATAGATAGATACAGTGTACCATATTT TTTCTATTAACGTACAACCAAGTTAATTCTTAAAACTATGTCCCCCACTACTTATTGCTT TTCGCAACCTCCGCAGGGGACTTATTTGATTCGGTTAAACAAAAAATCCGCAGACTTCCA ATATTTCCAGAAAGCTATTTTGTCACAATAACCGTACTGTAACCATCATCCCTCAGTCTC TGCTCCATATTTACTGCATTACCAATCTGCTGATAGGCACCTGTCTGAACTTTATACAAT CCGTTTTCATGTAACATAAAAGAGGGATAACCTTTTTCCAGTAACTGATATAACATACGG TCCGCATTCTCTTTTTTTCTGAACGCTCCAGTCTGCACTCTGTAATAAAGCGGTTCCTGC ACTGTTTCCTCATCCAGACTTCCAAGAATCGCATCTGCAATTCCCTGAGCTATATCGCTA AACTTGTTATCAAACAGTTTATTATCTTCTTCGGAATTGATAAATCCGGTTTCTATTAAA AGAGCCGGCATCCTGGTTCGTCTGAGGACCACAAGTCCCGGCCGCTCTTTTACACCGATT TCGCGGAATCCCACTTCTCCCAGAGCTCCCAGAATATTCTCAGCCATCTGATATTTAATC CCGCTTTTATCATAAATCAAAACTTCCGCTCCATTATACTGATTTTCCTTTGGACTGCTG TTTCGATGAAATGAAATAAAGTAATCTACTCCTGCCTGATTTGCAAGCTGTGCCTTCTCA AAAGGTGTCTGATAGACATCACCGGTACGGGTATAAGAGATGTCAATCCCTTTATTTTTT AAAATCTCACCTACCGCAAGAGCAAGTTTAAGATTGTCATTCTTTTCCTGTCTTCCCTTA TATACGGCTCCCGGATCCTGACCTCCATGTCCGGCATCCAGCATGATCGAATATGCCATG ACGACACTCTGCTTTCTTCATATACTCTTTATACTATATGAATTAAAAATATAATTGTGC AGGTCGCTTGACTTTTTCACGCTAAAGCGTTATACTTTAAAACGTCATAGTCGAATAGCC CGATGACATTATCCGAATCATTTACCAGTACTGCTTTCCCTGCAGAAAATCTTTCGGATT CAGGTAAGTTTTATATTATCAAATAATAAACGCAATTCTTACCTGACTTAATTTAAACAT TATATTAGGAGGATATATCATTATGAAAAGAAAAGCATTAGCAATCACTCTTGCAGCAGC CATGGCTATGGGAACCTACGCAGTAACAGCAAGTGCTGCTGACGGAGACAAATATACAAT CGGTATCTGTCAGCTTGTGCAGCACGAAGCTCTCGACGCTGCGACACAGGGATTCAAGGA TGAAGTCACCAAAGAACTGGGAGAAGACGCAGTTACCTTTGACGAGCAGAACGCACAGGG AGATTCCAACACCTGTTCTACAATCATTAACAGCTTCGTTTCCAATAATGTTGACCTGAT TCTTGCAAATGCAACTCCTGCTCTTCAGGCAGCTGCAGCAGGGACAAGTGATATTCCGAT TCTTGGTACTTCTGTTACTGAATACGGTGTTGCACTTGGACTGGATGATTTCGACGGGAC TGTGGGCGGAAATATTTCCGGAACTGCAGACCTTGCTCCCCTTGATCAGCAGGCAGCAAT GCTCAATGAACTTTTCCCGGATGCAAAAAATGTAGGTCTTCTCTACTGTTCTGCCGAAGC AAACTCTCAGTATCAGGTAGATACAGTAAAAGCTGAACTTGAAAAACTCGGATATACATG TGAATATTATGCATTCTCTGACTCTAATGATCTCTCTTCTGTTGCTACAACAGCAACTGA CGCAAGTGATGTAATTTATGTACCGACAGATAATACAGTTGCTTCCAACACAGAGATCAT CAACAACATCTGCCTTCCGGCAAAAGTTCCGGTAATCACAGGCGAAGAAGGTATCTGTAG CGGATGCGGTGTTGCGACACTTTCCATCAGCTATTATGACCTTGGTGTTACAACCGGTAA GATGGCTGTTAAGATTTTAAAGGACGGTGAAGATATTTCCACAATGCCGATCGAATATGC ACCAAACTTCACAAAAGAATATAACAAAGATATCTGCGAAGAGCTGGGCATCGAAGTTCC GGACGATTATGTTGCAATCGGCGAGGCTGCTGAAGAAACTGCCAAATAAATCCGGTCAGA CAGTTGAAAAATACTCACACCAACAGGATTTTAAATAACAGCTTATCAAACAGTTATAAA AAATTCAATTTATATGCGATCAGCGGGAAAGGTTTGACGCCTCTCTCGCTTTTCGCATCT CAACAGGAGGAAATTACAAATGCAAATTATAACATTAATCACTGCACTTCCGGGTGCAGT AGCCCAGGGTCTGATCTGGGGAATTATGGCAATCGGTGTTTATATCACTTTCCGTATTCT TGATATTGCAGACCTTACAGTTGATGGCACTATGTGCACCGGTGGTGCAGTGTGTATTAT GATGATGCTTTCCGGTCATAATGTCTGGATTTCTATGTTGGCCGCTACTCTCGCCGGAAT GCTGGCAGGCCTTGTAACCGGAATTTTTCACACCTTTATGGGAATTCCCGCAATCCTTGC CGGAATCCTGACACAGTTATCTCTGTATTCCGTAAACCTGAAAATCATGGGAAAAGCAAA TCAGGCAATCAACGTTGATAAATATAATCTTCTGGTTTCCCTGCGACATATAAAAAATGC ATCTCTTTCCAAAAACACAATTTTTATTGTAGCAGTTATGTGTATTCTCCTGATTGCCAT TCTCTACTGGTTCTTTGGAACAGAGCTTGGCTGTTCCCTTCGCGCAACCGGATGTAACCC AAATATGTCACGCGCCCAGGGTATCAACACAAACAGGAATAAAGTTCTCGGACTTATGAT TTCCAACGGTCTGGTAGGACTTTCCAGTGCACTCCTTGCACAGTATCAGGGATTTGCAGA TGTCAACATGGGACGTGGTTCCATCGTTATCGGTCTGGCAGCAGTTATTATTGGCGAGGC AATCTTTGGACGTATTTTCCGCAACTTTGCCCTTCGCTTGTTAGCAGTTATCTTCGGTTC CATTCTGTATTATCTGGTACTTCAGATTGTTATCTGGATGGGTATCGACACTGACCTGCT GAAGATGCTGTCCGCAATCGTAGTTGCTCTCTTCCTTGCATTCCCATACTGGAAAGGCAA ATACTTTAATAAACCAGCCAAAAGGGGAGGTAAATAAAAATGCTTGAACTTAAAAATATC TATAAAACCTTTAATCCCGGAACCATTAATGAGAAACGTGCATTAAATGGTCTGAACCTG AAGCTGAACGAAGGCGATTTTGTAACTGTTATCGGAGGAAACGGCGCCGGCAAATCTACT ATGCTAAATGCTGTTGCAGGAACCTGGCCGGTTGATGAAGGACAGATTCTTATCGATAAT ATTGATGTTACAAAACTTTCTGAACATAAACGTGCTACATACCTTGGACGTGTGTTTCAG GATCCAATGACAGGAACCGCTGCAACAATGGGTATCGAAGAAAACCTTGCACTTGCAAAA CGCCGCGGAAAATCCCGTCTTCTCCGCTCCGGAATCACTAAAGCAGAGCGCGAAGAATAC AAAGAGCTCCTGAAAATTCTTGGTCTTGGTCTGGAAGACAGACTGACTTCTAAAGTAGGA CTTCTCTCGGGTGGTCAGAGACAGGCTCTTACTCTTCTGATGGCAACGCTTCAGAAACCA AAGCTTCTGCTTTTGGACGAACATACCGCAGCTCTTGATCCAAAAACAGCTGCCAAAGTT CTGGAAATTACAGATATGATCGTAAACCGCGATCACCTTACGACATTGATGATCACCCAC AACATGAAGGACGCTATTGCACATGGCAATCGTCTGATCATGATGATGGAAGGAAAAATC ATTCTGGATATCCAGGGAGAAGAAAAGAAAAAACTGACAGTTAAAAACCTTCTGGATCAG TTTGAAAAAGCAAGCGGAGAAGAGTTCAGCAATGACTCTGCACTGCTCGGATAACCGTAT AAATTACTCATAACGTTTCTAAATATCCTTTATATGAGAGTACTTTTTTATGGAGTACTC TCATTATTTTATTCTCATCTTTTTCCAGCGGAGTTACACAGATAAATTTATGTGTTTCCC TATTGTACTGGTAGATTCTCGACGTCAGATAGTCCTCTTTCGGTGTAGCCTCCCTGATCG TATCCCGCAAAACACATTGCAAATCTTCAGGTTCTACAAATTTATCATTATGGATCATTA CCTCATGTACACTGGTAAACACCATATAGAAATCGGAATCCAGCAAATATGCCAGTTGTT CTGCAACTCCCGGCAGGAACACTGCAACTGCACCGTTTGTTTTCTTTGTTGTGCTGAGAC AGTTTCCCATAGCATCTTTCTTCAATTCGCACTTGTCCCCCAGATTCATAAAACTCTCGC CTTCATATTCCGGATTAAAAATCATCTGTTCCCATCTGTAAATTCTGGGCGGACTCATAA AATACGTATTGAGAATTGCCTCCTTAAACACCTCATCACATTCTTTCCCCCACTGCTCCA GCATTCCCTGCCGGATTTTTGTGCTTGTCACACATCCTTCATATTCAGTAACTTTCATAT AAAGCACAAGTGCAATATCACCAAGAGTTTTATATACCGCATCCTGAAGATCCGCGGAAT ATTTATCTGCATTCAGCAATCTGATAAACAGGCGGGGTTTTGTCTTCTCATAATCCCTGA TCACCCTTGTCTTCTCATAAATATCCGCCTTTTTTATCCGATTCAAATCATCTGTGATTT CTTTCATAATTTCCTCAAACGGACTGCCACTCTGATAAGATTTAAAAAGTTCCTGTGTAT AAAGTCCACAGACCTCCCAGGCATCATCATGCTCTGCAAACTTCACCAGCAGTCTGTCTC CTACAGGCGCAAACCTCCCGCCTTCTTTCTCAAAAGAAATATTTTCCCTCGGAATCCCTG TAGCCTCGTAAATACCAATCTCCAGTTTCTCTACGAATGTTTCATAGTCTTTCTGCATAT TCAGTTCCTTTCTTGCTTTGAAAATAATACGGGCAGGATGCCCTGATTTGAATGTTGACT TTCCGTTTTCGGAAAAAAGAAAATAAGGGAGCGAAAGCCCCCTTAAGAGTCGCTGTAGAC ATAGTATAAAATAGCCACAGCTATTTGTAAAGTAAATTTCATCGACAATATTTATTACAG TTTCTTTTTATCTTTCAGATATTCCAGAAAAGCCTCACAGCCCTCCACCACATCCGAATA TGTGACATCAAATCCACCTGTATACCATGGATCTGCGATATCCCTCGGATCATCACTATA ATCCAGAAGAAGCTTAACCTTGTCCTCTGGATCCGATTTCAATATTCTTAACATATTATT CAGATTCCAGTGGTCCATACCGAGCATATAATCATATTTATCATAATCTGCCTTCGTCAA TTGAACTGCGCGCTTACCCTTACAATCAATCCCATGCTTAGCAAGCTCCTCTCGCGCCGG AGGATATACCGGATTCCCGATTCCATTCCATATCTCCTCAGTGCTGGTTGCAGCAGATGC GATATAAAACCGGTCTGAAAGACCTTGTTTAGAAACCATGTCTTTAAAAATGAATTCTGC CATTGGTGAGCGGCAGATGTTGCCGTGGCAGATGAAAAGTACTTTTATCATTATTGCATA ACCTCGCATTTCTTAGTTTTTCTTGGTATTTCGGGCTTTGTAAGCCTTTGTAAATTTTTG CTTTCTGGCATAACCTGGTTTATTTTCGCATAATATCGTCAGCAAAAGGTGTAAAATAAG GTGTATGTTTTTCCATTTTACACCTTGCTATTTTCAATTAAAAATCGTAATTACACAACC TGAATCCGGGCAACTTCTTCCCTGGCATCCTCAAGATTTACATGCGTATATGTATTCAGC GTTACGCTGATATCTGAGTGGCCCATCAAATATTGCAATGCTTTTGGATTCATTCCGGAT TTTGCCATATTTGAGCAATAGGTGTGTCGGCATACATGTGGATGTGTCAAGTATAGGACA AAAAAAATTTTATTTTTTTCTGCCGAAGACTATCTGACGCTTCCATCAGGTAGTCCCAGC ACCTTTATTATCTTCTGATAAGTCATTCTTGTCCTGCTCAAGTTACCTCTGTTCCGAAAA AATATCGTCAAAATTCCATTCGATTTCAATTTCATCCTGACTATGAACACGGATCACCTT GATAATCTCACGCAGCTTCTCTGTATCGAACTTCTGAATTCCCAAGAAATCTTTTAGCTT TATTTTATCAGAAAGTTCATTTTGTTCAAGAAGCTTTTTACTATTCTCCGCATCTTCTAT CTTTCGTTTTATTTCCTCTAGCTGTACACTTATCTTTCCAGCTCTCTGCTTATACGAATC ACGATCTATACGACCATCTTTGTAATCATCATAGAGTTTCATCTTTTCCGAGGTCAACTG TCGGCTCTGTTTTTGCAATTCTGCGGTATTGATCTCTTTGTAGTCGCATTGCCTGTTGGA AGATACTTTCTTTTCTTTTTCCAACATTGACGCTGCATACTGATGAACAAGCCCAAGGAT ATTCTCCTCCAGCGGTTCCCGTCGGATCACCAGACTTTGACACACAGGATCTCCATTGGT TCGAGCATCTGAGCATTTTAGCAGATGCTCCGTTTCTTTTAGTAAAGAATGCCCACAGTT GGCACATATCAGCAATGCCGGCTGTTTTTTTCGTCTTTCCAGAGTAAAATTGGTGCGTGA TTCTGCAATAATTCTCCGTTTTTTCGGATGCATTTCATTTGCTTTTTCAAACAATGCCCT GTCTATAATTGCCGTATGATGATTTTCCAGACGAACCCATTCTGTTTCATCATTCAGAAC TGCTTTATGGCCAGTATGCATACTACAACGTGTCTTTCCCCAGATTCTGGTTCCAATATA AATCTCATCCCGGACAATTGCCGCTACTGTCGTAGGGCTCCAGTGTTTCTTTTTGATCGT GTCAAACCTCTGGAACTGCACCTGATCCCCTCTTGATAATTTCTGCTCATCACAAGTGGC AATCGCCTGTCTGTTCAATTCCCTTGTAATATCTGCAAAACTTGTTCCCTCCGATGCCAT CTGAAAAATCATTTTCACGACTTTTGCAGCTTCCGGATCAACTTCCAGCCTTCCATCTTT TCCTTTTTTATAGCCATATCTGGCATTTACCGGAAGGCGTGTGCCATTTTTTGTTCTTGT CTGCATTGCTGATGAAATTTTCTTGGACAAATCCAGGCTATACATATTGTATATCAGATT CTGCAATGCTACATTCATTCCACCAGTCATTCCGCTGCTTGCTGCACTGTCATAGCTGTC ATTAATCGAAATAAATCGAATCTGTAGAAGTGGGAAAATATATTCAATATAAAATCCAAC TTCCAGATAGTCTCTTCCGAATCTGGAAAAGTCTTTTACAACTACACAGCCGATTTCTCC GCTTTTCATGTCATCCTGCAGCTGTTGAAATCCCTGCCGTTTAAAGTGAGTACCGCTTAC ACCGTCATCCACATATTCCAGAATATCCGACTCAGCTACACCCAGCTCATCAATCACAAA TGATTTTAACAGAATTCTCTGAGAAGTTACACTGTCGCTCTCTTTTTTGGCTCTGCCATC TACATTGTCATCCTCTGCGGACAAACGGATGTAAACAGCTGTTTTTCTAAGATCCGTCAT CTTGACTGCGCCTCCTTCTCTTTCTTTAATTTCTGTAAGTCTGCAAACTGATCGTCATAT ACCAGCTTGATCTCATAATCATACTTACCATGGATAATAATTGAATCCACAAAGGCATCT GCCATTTCTTTTGTCAGCTTACGCTTTGACATATAAGTATGTATCACATTTCCCCAGCCT TCTTCGATGTGGTAATCCTGGGAATAACGAACCTGTGCCGCTAATACTGTGTCCAGACGG CTCTTGATATTCTCAATTTCATTGGAATAGATCCGAGAAAACTGTATGTACTCTTCTTCC GTAATCAAACGTTCCGAGTAATCTTCATATAAATCCGATTTACGCTTACTGATTCGGCTT AGTTCCCGTCGAAGTTTCCCCACTTCTTTATCCAAAAGCAGGTACTGTGTCTGATTTTTG GAAGCTGCATTCATTTCCTGAATCATTTTTTCTGTATCCAATACGGTTTTCATATGCGTT TGGATCAGGCGAAGAACATCGTCATCCACATATTCTTTTCTGACTCTGTGCCCTTTGCAT TGCTTTCCTCCGGATTTATGGTTAGTATTGGCTCCGCAGATATAAAAGAATGTGCCATTT CTTTCTCTGGACAACGTCATGCGGTTGCCACAGCCTCCGCACCATATCTTTCCTGTATAG AAATTATGGTTTCGAATAGCCCCATTGTTCTGCTGATGTTTCTTCTTATAAGCTTCCGTA TATTCCTGGATTTTAGATTGTACCTGTTGAAACAACTCTCTATCTATAATCCCTTCATGC GTGTTCTCCACATGCACCCATTCACTCTCTGGTCGATTTCTCTGTTTATTTTCCCGGAAA ACACTTTGCTGATATTTTCCAAATACAGAATCACCTGTGCAATGAACATCCTGAAGAACT CGTTTCACTTCATAATTGTTCCAGGGTTTTGACTCCGGAAGCGGCTTTTCACCGGTTTTA TAGAATTTTCTCTGTAAAGTCGGCGATAAAACTTCATCTTTATTGAGCTGTCTTGCAATA TCACTATAGTTCCTGCCATCCATATACATAGAAAATATACTTTTCAGATGTTCTGCAGCT TCTTCATCAATAATCAGCTGATGATGGTCTTCTTCTGACTTTCTGTAACCATACGGTTCC CAGGCACTTGTAAATTTTCCTTTTTTCCAAAGAGCTTTTTTTGCGCTGCTGCTCTTTTTG GCAAGGTCTTTCGAATAGAACTCATTGATAATATTCTTCAGTGGAACTGTAAGATCCACA CCCTCTCTGAAGGAATCGAAATCATCTGTCACAGCCAGGAATCTTACATGGAAAAACGGG AATACTCGTTCAATATAATTACTGGTTTCGACATAATTTCTTCCAAGTCTGGACAAATCT TTTACAATAACACAATTGATTTTTCCATGCTTGATATCTTCCATCATCTGTACAAATCCA GGACGGTCAAAATTTGTACCTGAATAGTCTGAGTCCTTATAAACTTCCGCAACCGAAATA TCTTCCGTATCTGCAACAAAGTTTTTCATCAATTCCACCTGGGTTTCTATTGTTCCTCTT TCCAATGTTTCTTCTGTTTCCATTGAAATTCTGGCATACAATCCTGCCCGGAACGGTCTG CTCACCTCTGTCTGAACGGTTGCACTGCTGACTACTTCCGGAATGTTTTTCCTGCTCTTT CGTGCCATTTTATACAACCTCCTTTACCTTGACCTGAAGATTATTATCATCATCTATTAC CGTATCAACTCCCATAGCCGGTAATTGATTCAGCAATGTCTGATAACAATCATCAAAATC AAAAGTGATCTCTATATTCTTTTTATCATATACTCTGATTTTCCTGATCAGTTCTACCAC CACAGTGCGGGACAGTTCTTCAATATCCTGATACTTCACAAAATAATCCAGCCAGGTATT GGCATTGTCGGCTTTTTCCAGCTCACTATCCATTTCTTTCTGGATCGCACGGATACTCTC TTCCGCATTTCTAAGCCTCTTTCCATAGGCTGCATGAAGCTCAACATAGTCTTCTTTTGA TACAATGCCCTCTTTCATATCCGAATAGAGCATCATCCGTAACTCCTTACAGCGTTCTGT CTCCTGTTTTTTCTTCTCCAGCCTGTCCTGCAGCTTCTTCATATTGATCTCCTGAAATGG CACAGTACCAACAAATTCCAGGACTCTTTTCAGGTGCAGAATGTTCTGGATATGCTGTTT CAACATCACCAGTACGGCATTTTCCAGATCCTTTTCCGGTATTCTGTGACTGGAACAGCG TTTTGTTTCTTTATTTGTGGAACATAGATAATAAGCATATTTTTTTCCTGCCACAGTGGA AACCTTTCTTGTCATAGGTGCACCACAATCCGCACATACAGCAATTCCGGATAACAGATA TACCTGCTTTTGGTCAGGTGAAGTACGTGTATCCATGCCCAGAAGTCTCTGAACAATTTC AAAATCGCGGTCACTCACCAGTGGCTCATGATTTTTCTCAATCCGGATCCAGTCATCTTC CGGTTTCACATAAGTCTGCTTCACTTTATGGTTCGGTGTTGTCCTTTTTCCCTGCACAAG ATTTCCGATATAAACCTCGTTTTCCAGTATCCTACGGACTGTAACAGAACTCCAAAGTGC CTGTTCTTTCTGCCGGAAGCCAGTTTCATAATGACTGCCGCTGCTGATTTTATATTCAAA TGGGGAAAGAATACCCAGTTCATTTAAACGATTAGCGATCGCATCCTGACTCATTCCCCG CAGCTTCATCTTAAAAATATCCTGTACTACACTGCCTGCAGATGGGTCAATCTCTAATTT ATGCTTATCTGTCTTTGTCTTCCTGTATCCAAATGCTACAAACGGAGTCACGCATTCGCC TTTTTTCCTCTTAATCTCAAGATTACTCCTGATCTTAATAGAAATGTCACGGCAATAAGC ATCATTGATTAAATTCTTAAATGGAATAATGATTTCATCTGCCTGATTTTTTCCCTTGAG ACTGTCATAATTGTCATTGATGGCAATGAAGCGCACACCAAGAGCCGGGAATAATCTCTC GATATACTTCCCGGAATCAATATATTCCCTTCCAAATCGTGATAAGTCTTTTACCACTAC GCAGTCTACAATCCCACGCCGGATATCTTCCAGCATTGCCTGGAATGCTGGGCGCTCAAA ATTAGAGCCTGAGTATCCATCATCAACTCGGACTGAAACAACTTCAATATCTTTTTTGTC TTTCAGGAAATCCAGAATCAAAGCTTTCTGGTTAGAAATGCTATTACTTTCCAGTTTTGC TGAACTGGAAATATCGCCATCTTCTTTAGATAATCTGACATAGATGGCGGCATGATAGAT TTTATTGATATTCTGATACATATCTTACCTCCTTTTATTACGTCAGAAAATCCATGTAAT AAAAGGGGGCTGCATAATTTGTCCTTACCGACATTCTAACACAGTCCCCTCAATCTTGCC AGTACTTTTTCAGACACTCAGAAGCATATTCTCAAATGCCTGCTCCATAGATATACCGTT ATTAGCAAATCTGACTTTTACTTTCATATTACCGATCCGGACCAAATATGGATTTCCTAC TTTATTCAGAAAAATATCTCTCCGTTCCTGAAGCGATTTATTTCTGTCTGCTTTTATCAT CCGTAGGTCAGTCATTTCATTGATATCTACATCACTGAAATCCTGCTCCAGATAGTTTCT ATATTCCTCTGCCGTCATGCCCTTCTCCTTCCATTCCCATCTGAATCCGTACTGCTTTCA GTACCCGATCCAGGCTCCACTTATTTACTCTTCCGCATTTCTCAATAATACATTTTGTAG AAATGCTCATAACCTGTTCAGCCAAGGCCAGGCTTCCTTTTCGGATCCCTGTCATGTCAT ATTTACTGATAAATACATGTGTTGGTAAATACCGCTTCTTATATATTCTTGATGTCAGCG GAACTACTGTAATGACTGAACTGTATGTATTAGCTTTGTTATTACTTACTACGATCACCG GTCTTACTCCACCCTGAACCGAAGTTGTCGGGAACATACCGAGATCCGCCCATAAGATAT CTCCTCTGCGGATTGTCATTTGTCCTCTCTCCAATCTATTATTTTTACTTGTAAAGCATC CATAGCGCTATATTGGCTCCACAGGAATACGGCAGAGTTTCTTTCCCATAAGGAAAGCTC TGCCGCATAACCTCTATAGCCAATTTGATTATTAAACAGTGCTCGCTCGATTCTATTTAT CCCCGATACCCCGAATCGTTACTCCCGCATATGCAGGAAGGGAATAATAACCTGCCCGAA TGCATACTCCGGACCACAACCCGAAAACTCTCGTTTCCAGGCTCCAGCAGTTCATAGGTT TACCAGTTACAGACTTCTCAGGGTCTGCAAGTGTATCGCATCTCACACATGTCATCGCAT CACCAGCCTGCCGACTGGCTTTGGTCAGTGCTTTTTCGCAGCATTATTGACTCTAAATAG TTTCTTACGTCCTTATAATCCTATAGCGGCATCTTCCTCGTGCTCTCTGCATGAAATGTC ACGTCAGTTATTATTGGATATTCAGTTATCATGGTGCATTTTAGGGAGTCCTTAAAGCTC CTCTAATTACTAAAGTCAAATGACTTCGGCAGATGCAAAAATTTTTAAAAATTTTTTAAA AAAATTCTTTCATATACATTTCACGCATTTTATTAAGGATTGTTTTCAGCTTGTACGCTA ATACCTGTCTGGAAATCCCCATAATCTCTGCCATCTGTGTCTGTGTCTTATTTTCAAAGA AAATGCTATAAATAATCATGCGTTCCTCGGTATTCAGCTGATCGATCACTTTGTGAATAT CCTGCTGTTCCATTTTCGTCAGTACACTGTGCTCCACGTCACAATTCAGATCCGGGAAAT CCTCAATCATGAATCCTTCCCCATCAATGGACTGTCCACTGTAAGGCACCTCCCGCAGCA TCTTATCCACGACTTCCCCCAGCTCGTTCTTAATCTCAACTTTTTTTGCCTTGCTGCTTC TGTAAAAATTGTTCATCGCATACGCAACTTCTTTTGTAATCTCGATCATTTCTCCATCAA TATTTGCGTAGTACTTTCCTTCATAAAAATATGGGTGTTCAATATACATATCCGTTCCTC CTGAATTTGAAATCTTGTTGCTCGTTTCAAATCCAGAAGGAGGACCTCTGTTTAGGATCA TGCCTGCTCCGCCTTTATCCTGCCGGGACATACCCGCAGTTATTGGCTGAGAAATTCAGG CACGAGTCATGACCACCCGCTTAGCGGGTGGCATGTTCTCCCCCTATAAGGGGATATTAC CTGCTTGCGCCCGGAAGGCGCACTGAAGTCTGCTAACTGCACCACATTTACAGCTGCCCC CAACTGGGGGCTTTTTCAGTGCTTCCTTACACCGGCACAGCTCCAAAAGGAGCTTGCTGG TTTGCTTTGACTTCCTACTTACGCTCCAAGCGTTTTATTTATTGTGTTTCTTCACTGGCT CACCCGTAAACGGGTCAATATACTCTACTAACGACATCTGATCATACTCTAAATCTTCTT TTAATTGTTTCTGAATATATTCTTTGATCTTTGCAGTATTTTTACCGACTGTATCTACAT AATATCCGCGACACCAGAAATGCCTATTTCCATATTTATATTTTAGATTTGCATGGCGTT CGAATATCATGAGCGAACTTTTTCCTTTGAGATATCCCACTATTTCTGATACTGAATATT TGGGTGGAATTCGCACCAGCATATGAATATGATCTGGACAACACTCTGCTTCAATAATTT CTATTCCTTTTCTTCTGCATAATGATCCTAGAATTTCTCCTACATCCGCTCGTATTTGTT TATAAATTACTTGTCTCCGGTATTTTGGTGCAAAAACTATATGATACTTGCATTCCCATT TTGTATGAGCTAAACTATTTACGTCCATTATTTGGACCTCCTGTGCTTTTATTTGTGGTT TTGCAGACCCACATTCATCATAGCACAGGAGTTCTTGCTTATATCTAAAGATTTCTCCCA CCACCCGCATAGCAGGTGGTTTATTTCATTGCTGACACAAAAAAAGCCCCAGTAGTTTTT TCTTAACTACTGAGGCTTTCGTCTCTTTCTTGTATTCAGTTATCTATGCCTTCTTTCATC AGCATAATCATTGTATCAGGATAAAGTTCACAAAGTATCCGCAATATGTTCCCATAAGTT CATATCATTATTGGAATCGTACATATTTCAGTATAAAAAGTTCACCGTGTTATTCTTCTA CTTCTTTTCCATCTATATATAGTTGAAATTTATCAGGATTATTGACTACATCATAGTCCT TTCCATATTCTACAGGTCTGTATTCGGCTGTCATTACCGATTCCCCATCTTCAATATCCT CTTTCCATAAATAGATGTTCATATCAAGACTCGTCGCATATCCCCTGTCTGTGGAGAATT TTGTCGAATAAAAAGAATCATCCTTGTACATCTGCAAAAGCTCTCTTGCAAACGCTTCTC TATCCTCAATATTTTTCCGGTTAGCGACCACGGTTAAATTTTCATCCCGATTTACGGAAA ATGTTCCAACTACATCCGGTTCACCTTCCTTATGACCAAATTCAGATTTCCCATAAATAC TTCCTGCAGCAATTATCAAGATCACTGCTCCTGAAATCAATGCAATTATCTTTTTCTTCA TATTTTTATTTTCCTTTTAGTTTTTTTACTGCGTAATTGACTACTTCTTCCGGTGTGGGT CTGTCTCCTTTAAGTGTCATTTTCTTCCATTCTTCCTGCACAGCCGGATCGGGATTATCA AATCCTGCATCTATGGCTATCTGCATTTCTCTGCGTACCTCTTCTGGTGTTGTGTTGTAC TTTTCTGCAATCTTCTCATAAATAGTTTTCTCTCTCATTCATTTTCCTCCAATATATAAG TAGAATTACACCTTGTTCTATAGAACTAATTTAGCATATTTCTATTATCATGAAAAGACA CTTTACAACTTAAAGCGGAATAAAAAGCCAAAAAAAAGAAGAGCTACTTGCTCTTCCCAG TTTGTCATATCACTCTTCCAATAATGTGTGAATTACTTTGATGATTTTTTTCTGCTCTTT GATCGGAAGTTTTTCAATTTTTTCTGTCAGCTCATTGGTAACACCTGTAACTGAATGTGC CACAACATCAATTAAAAGAGTATCTGCTGAAACATCTAATGCATTTGCAATTGCAACAAA GGTATCCAATTTTGTAACTTTCAAGCCTCTCTCTATTACACTCACATGCGTTGGACTTAA ATTTACTAATGCAGCCAGTTCCTCTTGCGTGAGATTTTTTGCTTCTCGTGCTGATTTGAT TCGCTGTCCTACTGCTTTCAAATCCATCGTAACACCTCCTTCAGAACGAATAATCGTTCT GAATTTAGTATACTTGTGGATATCTTAAATATACAGAATCGCAAAACCAAGTTCTAATTC TACAGAACTATATTCAAAGTTTTTCTTTGCATTTTTGTAAAAAAGCGTTATGATTGAATC AGTTAAATCAAAGGAGGTATCAAATCATGAAATCACATAAATACTGGTCCTTAGGCGCAC TTTTCTGTATATTGGGATGCATTTATTCTGGAATCAAAAAATCTATGACTGCACATAAAT ACTTTGCTTATTTTTCATTGCTTTGTATGGGTATGTCCATTTATTCCGGTCACAAACTGG TTCCTCCAAAGAAGAAAAAAATCACTGAATCAAATAATAGTAAGAATAGTTAAATAAAAA ATTGACCTTTATTCATCAAAGACAAAGTTGCTGGAGAATATTTTTTCTCTCCAGCAACTT TCTTTATCTTTAAGCCATTGAAACACAATACTGTCCAATCAGCTTCATCCAACTATTATA TTTATTCTTTTCACACACCTTTCGGCAAATTTCATTTTCCATCAATACACAGAACATCTT ATCATAATCAAATGCCCAAACAGCACCATTCACATGGTTTTCCACTGCTTTCTGATCTAT GCTCTTTAAGCGTGTGACCATTTTTTCAATTTCTCCATTTCCCAAGTTACCGATATTTTT ACAGATAAACCGAAAGAAATTCAACGTTGCATATTCGTCATGCCAGTGGAACTCCTCTGG ATTGTTTTTAATTTTACTGGCTCGCTGCTGTTCTTTGATTATCTGATCAGCTACACCTTT CATCGAATCTTCGTATCTCATATTATTCACCTACTCTTCCTCTACGCCCAGTGACGGTTT AAATCTTTTATCCTTTGCCTGCGGTACCACGATCTCATAAAAATAAAATCCTAAATATCC AAGTGCCTGCTTCTTCATTTTATAAAATGAAGTCCTGCCTATTCCTAACTCCTGTTGTAC TTCCACATCTGTCTTATTATAATGACTGCAAAAACAGGAATGAAGGATCTCACTGAGCAT CACACCATTCGGTGCATAGAACTTAACCAGTGTCATTCCACGATAGATCATATCTGACAA GCCATAAATGATCATCAGGTTATTCATTTCCCGGTGCATCTTTGGCACATTCAGCTGATT GTTATAAATGCTCAGATAGCTTAACGCATATGCCATATCTTCATTGATTTTCTCCTGGCA CTCCATATCCAGTTCTTCTAACACAATCTGATTTTCCAAAATCAATTTCTGATAGCTTGT CATCAGTTCTTTAATATCAGTATAATGTCTTTCAATCGTTACTTCCAGATAATCCTGTGC ATGGCTTGCCATCTGGAAGGTAATCTCTTTCATTGATTTAATTGCATAATCTCTGTCTGT CATCAGTTTCAAAATCTCCTTATCATCATCACACTAACTGGCGGTCTTTCAGACCAGTTC GCTTTCCCCATGATTTTGATGGGAAGCAATTACTTACTACAACTTGCAGAAGCGGATATC CAAAAGGCATTGTGGGAGCTGCCTTTGCTGACCGGAATCCATCTTCTTATGTAAAACCTG CAGGAATAAAAAGGGAAAGTGACTATCCCTGCAGGTTAATAATCCAAATAATATCGTCTA TACCAATCTCTCCTTATGCTGTTTTTCTCTCCATAAACCATTTATCCACTTCGTAAAACA AGTGGCTTTCCTGCCCCTGTATCATACAGGTGTACATCATTCCTACACCGCCTGCCTTTC TGCTGGCGCACCGCTCAATTTTCAAAATTCTGTCAATGCTATACTTTCTTCCATCCTCCC ATGTAAAAAATATGGGAACCAGCTGTCCGTCTTTCCGAAACTCTGCTACTACATCTACAT ATACTTTGTTCATGCCGACACCTCACTATAAAATCTCAATTGCTCTTGGCGATGCCGGGA TTCTGCGGATATATCCATTTAACTCCAACTGCTTGATTCTGGAAAATGCTGATGATGTTG ATTTCACCCCGATCAATTTTCCAAATTCCCGTATTGTCGGTGGATATCCATGTTCATTGG TATATCGTAAAATACACTGATAACTTTCTTCCTGTTTTCTGGTTAATGCTTTTTTCAAAT CTATCCCTCCAATTACCCATGGAAATAACTATGTGGATGGATCGTGTGCGTACCAGCGTC TAAGTGGGATAAGACTTTATCCTGATACATTGCCGCTCGCTGTATACTGAAATAACCAAA CCGTCGTCTGATCTCATCTACAGTACGATCCAGCTTCTCTAACTTTTCCTTTTTCTCCTG ATTTCCAAATAAATCCAACTGCACGGGAATATCATCTAACACAAGATCCGCAGCTCGGAT TCCCAGGCTTCTAATGGGATGTTCCCATTTGTAATTATCTTTAAATAGCTGAAATGCTGC AGTTACAATCTCGTTTGTAATATTCGTTGGCTGTCGTAAATGTATCTGTCTGGAAAAACT ATACAACCGATTATCTCGGACTGTAATTTCTACTGTTTTGCATTTAAATCCATGTTTCCG CAATCGTGCAGCTACACTTTCTGCCAATGCTATTTGAATGATCCAGACATCCAGATCATT TTCCAGATCTCTCGGTGTTGTAGTGCTATTACCTATCGACTTTACTGGTGCTTCATATCC TTCCTTGCAAACCGGATCTTCATCCCAGCCATTTGCGAAAGCCCATAATACATTTCCTAT TTTTCCAAAATGACTCTCTAACAACTTTTCGTCTGATTCCGCAAGTTGCCCGATTGTCCG GATTCCAAGTTTTTGCAATTTCTTATTTGTCTGTCTTCCGACATAAAGCAAATCTGACGC TGGAAGCTGCCATATCCTGTCTTTATAATTTTCTCGATTAAACTCTGTGATTGCATCCGG CTTTTTATAATCTGAACCAAGTTTCGCATAAATCTTATTCCAGGAAATTCCAATACTTAC CGTTACACCCAGTTCGTATTTAATCCGATGGCTGATTTCTCTTGCAATCGTCATTCCGCT TCCTTTCAGATTTCTGCTGTCCGATACATCCAGCCAGGCTTCATCAATTCCATATGGCTC GATCTTGTCCGTATACTCCGAATAGACTTCTCTTGCCATCTGTGAAAATCTCAAATACAA ATCCATCCGTGGTGGTACAAATATGATTTCCGGACAAATCTGTTTTGCCTGCCATAATGC CATTCCGGTCTTTACACCTTTTTGTTTTGCAATATAATTTGCTGTCAGCACAATCCCATG TCTGGCTTCCGGATCGCCACCGACTGCCAGCGGCATTCCGGCAAATTCCGGATGATGCAG CATTTCTACACTGGCATAAAAACAGTTCATATCACTATGCAGGATCACACGCTCACTCAA
Region Details
| Region | 1 |
| Region Length | 23.1Kb |
| Completeness(score) | incomplete(50) |
| Specific Keyword | integrase,recombinase |
| Region Position | 117677-140776 |
| # tRNA | 0 |
| # Total Proteins | 18 |
| # Phage Hit Proteins | 10 |
| # Hypothetical Proteins | 7 |
| Phage + Hypothetical Protein % | 94.4% |
| # Bacterial Proteins | 1 |
| Attachment Site | yes |
| # Phage Species | 10 |
| Most Common Phage Name(hit genes count) | PHAGE_Brevib_Jimmer1_NC_029104(2) PHAGE_Brevib_Jimmer2_NC_041976(2) PHAGE_Clostr_phiCD211_NC_029048(2) PHAGE_Bacill_WBeta_NC_007734(1) PHAGE_Hypert_2_NC_014321(1) PHAGE_Strept_K13_NC_024357(1) PHAGE_Bacill_Fah_NC_007814(1) PHAGE_Strept_DCC1738_NC_024361(1) PHAGE_Entero_mEp390_NC_019721(1) PHAGE_Lactoc_ul36_NC_004066(1) PHAGE_Lactob_phiPYB5_NC_027982(1) PHAGE_Clostr_phiCT19406B_NC_030947(1) PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1) PHAGE_Bacill_SPbeta_NC_001884(1) PHAGE_Geobac_E2_NC_009552(1) PHAGE_Lactoc_bIL286_NC_002667(1) PHAGE_Clostr_c_st_NC_007581(1) PHAGE_Lactoc_PLgT_1_NC_031016(1) PHAGE_Bacill_Bam35c_NC_005258(1) PHAGE_Geobac_E3_NC_029073(1) PHAGE_Deep_s_D6E_NC_019544(1) PHAGE_Clostr_phiCT453B_NC_029004(1) PHAGE_Bacill_Gamma_NC_007458(1) PHAGE_Clostr_phiCTC2B_NC_030951(1) PHAGE_Brevib_Osiris_NC_028969(1) PHAGE_Sulfol_SMV1_NC_023585(1) PHAGE_Bacill_GIL16c_NC_006945(1) PHAGE_Cronob_ENT39118_NC_019934(1) PHAGE_Entero_cdtI_NC_009514(1) PHAGE_Clostr_phi3626_NC_003524(1) PHAGE_Clostr_CDMH1_NC_024144(1) PHAGE_Bacill_phBC6A52_NC_004821(1) PHAGE_Bacill_AP50_NC_011523(1) PHAGE_Geobac_GBSV1_NC_008376(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 11.11% |
| GC % | 39.98% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>2 197458-215519 TTTCATCACCTTTCGTGACGGATGCTCCTGCAGATACACTCCGGCTGCTTAAATGTGCAT ACCGTAGTTCATAGCCTTTACTGTCCTTGATTACAACATAATTGCCATAGCTGTCGTTAT AAGCAGAAGTTGTAACTGTTCCGGTCAGTCCTGCCATCACTTTTGTTCCTTCCGGTGCCC CGATATCCATGCCATTGTGTAACTGATTAGCTCCAGAAATCGGGTGAATCCTGTATCCAT AATAACTGGTCACACTGGAATACCAGTTAAAATCAACCGGTGTCGCAAACATCTGCAAGT TGCCTTTTGTATCGTTGTAGGCACTGAACAGTTCTTTCTGGAAAAATCCCAGCCTGTCCT GACAGATTAACATTAGGTTTCCACTATTTAAGGTGACATTCAGCACATCTACATCTCTTG TCCTGGTCACTTCCACTTCATTGCTTCCGTTATCATCTGCCAGATAACATTCCCAGGTCT GATGTCCATGTGCAGATGCTGCCGCATGACTGTCATAATAGACATCAAACTGCACGCCAT ATCTTGCGAAAGCTCCGGTATCTTCTACCGTGTACTCCACCCCATTCATCACAACTTTTG TTCCGATTGGCACGAACGGATCATACGCATCTACTGCAAGGGTATGGTTCGCTGTCGGAT ACACACCACTGGCAGTCGGTCCTCCGCTCCAAATACCACAGCAGATTGGGCAGTTACAAT ATCCACTGGTAACTACTTGTCCCAAAGATTCTCCCACCCTCACCGTTGCTGTCTCCGTCA CGGTTTCATTCACTGCTTCCGTAGTCAGATGGTATTGCTCTGCAAACAATGCATCCAACT CCGGCTTGACCTGTTCAAAGGTAAATTCTTCATACTTTGCTGACAGATAACTAATCAGGA TAAACGGATCATGCTCAATGGGTCCGATGTTATATCGGTATTCCTCATGTCCCGGTTCTT CGGATTCCATGTTGTTGATCCGCTCCTGCAGATTAGCTTCCAGCTGTGTATAATATAGTT CCGCTTCCCGGATTGCCTGATCCGATGACAGATAACTGGTTCCCGTGTAAGTGATCACAT TTTGTAAAAACACCGCAGAGCATGACGTGACATTCGTTATGATCAGAAACATCAATCCGA TCAGAACTGCTACACTGATATACACCTTCCGGTTTTCTTTAAAGAAGTTGGTGACTTTGC CGCCAATCTTCTTGATATAATCAATCGTACCTTTTGTAGCTGTTCCTACTGTCTGTTCAC TTCGTTTTGCTTTGGCATAATCCCGTTTGATCTGTTGCTTCTGAATCTGTTTTTTTAGCT TCTTCTGTTCCTGACGGGCTGCCGCCTGTGTCTGTTTCTCTGCCTGTCTCTCCAGTCTGC TTCTCTTTCTGGAAGCCCTCTGTTTCCTTCGTCTGGCACTTCTCTGTTCCAGCTTGTAAA CACCTTCGCCGCCTTCTTCCAACTTATGGGCACCTTCTACTGCCGCATTGTCGTCTTCAT TTTTGCTGATCTCACGATGCAATGCTGCGCAAGTTGCACTTCCTGCTTTCTTGACAGCAG AAGTTTTTTCTGTTTTCACAGATTCCCCTTCGCCAAACTTCAAGCGGGATTTCTTCTTTC CAGGAGCTTCTCCATCATTTGCCTGATAGACCTGTGCCTTCTTGGAATGCTGCTTTGCTT CCTTCTTCTTTTTTGTTTCTTCATAAGAAAACTTTTTGGCTTTTTCCTTCTGTTTCTGAT GACGGAAATTGACTCCATCCATATCCATCTGGTTCAATTTCTCCATATCTTTGTCATTTT TCACAGAAGCACCAGTCTCCTCATAAGCAAATTTCAGACGCTGTTTCTGCTTTGGTTTCT TACTCCCACCATTCTTCTTACTCCGGCTGTCCCCTCTGTTTTCTGAAAGATCCGCACGTT TTTCTTTCAGTCTCCCTGACTGGCTGGCTTCGGATTTTTCCGCAAGTCTGGATTCTTTTC CGACTTCAGCACGAATTCTTTTCCGGTTTTGTTGCTTTCTGTTTTGTCCAAAATCTTCAC TTTGGTTCTCTGTTCGCATCAGTTCCGGTGCATCCCTGGATTTTTGCACAGAAGGACGGA TATTTTTCCCACTCCGTTCAGACTGGCGGGGAGACTTATCCACAAGGCTTTCTTCTTTTT CACCTTGTTTTATTCCCATCTGCACATCACTGGCACGGTTACTGACACGAACAGAAGATT TATCCGTCAGGTTCTCTTCCACCAGACCATCTTTGGTCATCTTCTGGACTTTCTTATCCC TGACTTTCATTCTCTGTTCTGCCACTACTTACTCCTCCTTTTTCGGATACCCTTTCCCTG CCTGTAATAAACAGAGAAAAGCGATGCCAAATACAGCACCGCCACTAAAAGTTACTACAT ATGAAATTGCTCGTAACATTGTCTTCTCCTTTGATTTAACCTGCTTCGGAAGTTTCCTCT AAGCGGGTTGTCATGATTTTATAGAGGGAATTCTTAGGGAATCTGTCTACAAATGGGATA ATGACGTTTCCATAGAACAGAAGTCCTTCTCCCTCATTACTGTTGGTTACATAGGACAGC TGGGTTGGTGAGATATTCAGCTGTTTTGCCAGAATCTGCCGGTCACCGGATGCCTGGTTC AGCATATAAATAAAATCTGAATTTTCAAATATATTCTCTATCTCCCTGGAAGACAACAAA TCCTTAATATTCTGGGTGATGCCCGTTGGGATACCACCCCATTTACGGAATCGCTTCCAA ATCTCCACGCTGTAGGCTGCAGTCTGCTCTTCCTTCAAAAGAAGATGGAACTCATCCACA TAGTATCTGGTGGACTTATGGGCAGAACGGTTCATCGTCACCCTGTTCCAGACCTGATCC TGGATTACGAGCATCCCTATCTTTTTCAGCTGTTTTCCCAATTCTTTGATGTCAAAGCAG ACAATGCGGTTATTGATATCCACGTTTGTCTGATGGTTAAATACATTCAAAGAACCTGTA ACATAGATCTCTAATGAAGTAGCCAGCCGCTGTGCTTCCGGCTCTTCCTGTTTTCTCAGA GGTTGTATAAGTCCTCCAGGATTGGCATCTTCTCCGGTACTGGATCGGCAAGGTATTCCT GATATACTAACCGAACACATCGGTCAATAATCGTTTTTTCTACCGGCTCCAGTCCGTTCT TTCCACCAACAATCAGTTCACACAAAGACAGAATAAAATCTGCTTTTAGTGACAGCGGAT TGTCTTCCTCGGAATAATTCAGATTCAGATCCATCGGATTGATATACTGGTCAGATACCG GTGAAACCCGAACTACCTGTCCATGCAGTGCCTGCACAAGTGCTGAATACTCGGCTTCTG GATCACAGACGATGATATCGTCTTCTGTAATCAGGAAACAGTTCGTGATTTCTCTCTTTG CTGAGAACGACTTTCCGGAACCTGGTGTACCAAGAATCAGTCCATTCGGGTTCTTCAGAC GTTTCCGATCAACCATGATCATGTTGTTGGATAACGCATTCAATCCATAATAAAGAGCTT CCCCTTCCTGAAACAGTTCCTGTGTCGTAAATGGCACAAAGATTGCGGTTGATGATGTGG TAAGCCCTCTCTGGATTTCAATTCGATTGACTCCCAGTGGAATGCAGGACATAAGTGCTG CTTCCTGCTGATAATCCAACTGTTTTAAAGAACAGTTATATTTCTGTGCGATTCCCTGCA CCTGGAAAATATTATTATCCAGTTTCTGACGCTTCTTTGCTGTATTCATAACCAGAACCG TTACAAGGAACATTCTCTCATTTCTGGACTGCAGATCTACAAGCAAGTTCTTCGCTTCTT CTCCATAGGTTACAAGGTCCGATGGAAGCACGTCCATATCATAACCGGAACGTACCGCTC GTTTCTGCTCTTCGATCTTCATCTTATCCAAATCTGAAATCTTGCTCTTGATCATCTTGA TCGCTGAACTCTGGTCAATAGACTGGATATGGATGTTGACATTAATACTGTCATCTACAT CCAGGAAATCTGCAAGCATCCGGTCTGTCAGCTCTGGTGCAAGAATCTGCAGGTAACTTA CACTTCCCATCGTTCTTCCCATCAAAAATGTCTGATTCTTGGAAAAGTTAAAGGAAGTCG GTGCAATAAAATCTTTAGTTTTTAATCCAGTTTCCGGCAGCATCTTATACTGGAACTTAA ATGGTTCGATCCGATCCTGGTTGAACACATGATACAGAATCTCCAGCCTTTCCAGTCCAT TCAAAGAATGTGCCTGTGCTCCCAGGACCTTAAAGTTATTTAAGATATCCGTTTCGATTC TTTCAAGCCTTGGTCTTGCCACCTTCAGGCTTTCTGCTTCGATTCCAAAAGTGATATATT TTGTCTTTACCAGACCATTATTTCCTTTGGAAAGCTGATTTTTCAGCATAGTACGGTACT CTTCACGAATGGCATTGAAGTCATCGTTCTGATCCGGAATATCGATGCTTTTCTCAAATT CTGCCACATCCACCTGCTGATTGATAAAGGACAGCTGCACACTGATGGAAGAATCAAAGT AATTTAAGAAATCACAGTAATTCTCAAATATCGTGGTCTTATCCTCATTTAAAGCAAGCT GATAATTGATGTCATAAAACTGAATTGTCTTGGAGAAAAAGGTCTTTGTCACCTGGCAGA TACCATCCTGCAGCATCCGAATATACGGAATACTCTGCTGTGCAGTTGTAGGAATGTTTT TCTGTTTCCTACGGTCCCGTTCCTGTTTCTTCCTACGCTTTTCCTGTTCTCTTTCTTTTC TGCTTTTTTTGTTTTTTCTTTCCTGACGGTTTCTTTTTTCCGCCAGGGACAGACGCTCCT GCTGAGCCTCCTGCTTTGTCTTTTTTGCCATCCGGCACACCCTCCTTTTTTACAAGGGTG GAAATCTCCTGATAAAAATTCTCTGTCTTATATGGTCTTACCGCCGGACAGATAAACTTC TGTCGAATGATATTTGCCACCACTTTTTCAAATGGAAGCCCGTCTTTTTCATACATTGCC ATAAAGAAAAATGGAAGCATGATCGTTACCATCAGGATGGCTGCGATACTGGAACCGATT GGTTTTCTCATGAACAGATAAAACGGAATTCCCACTACTGCGGCAAGTGAAAAGAAAATC AACTGCCGTTTTGTCAGATTTAACGCTACTTTTGTTTTGACCTTGGTAAGGTCTTTTGGT ACTGGTACATACGCCATGGTATGCGCTCCTTTCCTGCCCGTTAGTGGGCATTAAATATCG ATTTGCTAAGGCTTCCTGTCTTGAATAATGAAAATGCAAGAATCACGGTATAAGCCGCTA CTGAAAACATTGCTGCATGAAGGTCACTGGATATGGTCATTGCATTTACTAAAACTGCAT AAATTCCCACACAGACCATCATGAAGAATCCCTGAAATGCCAGTGCGAACAAGCCTTTTA AATAGTTGTTTCCAATATTGCCCCATTCCTTATTGGTCATGGTGGCAAACGGAATTGGTG CTATGGAAGTATAAAGGTAAATTTCTATCATTCTTCCGTACAAGATTACCGTAATGATAA TTGACAGAATGTGCATGGTAACACTGATCAACATCGTTTCCATGGATAGCAGGAACAAAT CCCCTAACTCCATATCCTCCAGGGCATCCACAATCCGTGTAATTGCTTCTGTTGCATCCA CCGCAGTGTTTCCTGATATCACCCCGGCGGCATTGTTGACCACATGCTGACCAACATCAA AGACCGCCATCGTGATATTGAACGTATTTGTCACCAGATAAATGGCTACATACGCTTTGA AGATCCAGAGGAAAATGTTATAAGTCTCAAATTCATGGAAATTGTTTTTCTGTGTTACCA TCGTGATCAATTCATAGCACAGGACAAAGGTGATGATCAGTCCCGCAATGGGGACAATCA CCGTTTGGGATATATTCTGAATCAGATTAAAATCCCTGCATTCCATCCCTGCGGTGTCTG CCCCACCTGCCCGGCTATGGTTCCCACCTGCTCATTGACAGACGTGAACATGTTATCCAA ACTTGACTTGATAAGCCCGATCAGGATATCCTTTATCGCTTCCGTAATTCTCTCAATGAT GGTGTTCATCTACCACTCCTCTTAAGAGAACAATGTTGCCAGCTGTGGAATCAGGGTAGT TCCCAGCAGCATGATTCCGGCACCAGCCATCAGCTGTTTGATGCCCTGGCTCTTAGCGCC GGGATTGTCATTTCCATATCCTTCCAGAAGGTTTACGACACCCCACACGCCAAGACCTGC GCCGATTGCGACTACAAGAGTTTTTAAAGTTGTAATTGCACTGCTAAAAAATGCCATATA CATTCACCAAAACTGACTTCTTTCAGGTGTTACGGGAATGAAAAAACACCGACTAAAAAG CCGGCGCACCTAATGTCAGTTATTCCTTTCCTCATTATTTTTCGTTCATTCCCATGGTTA CTCCGACAGCTCCACCTGAATTACCTCCACCTCTTCTTCGGGTTTCGGTGCGTACTGCGG ATTTAACTCTTTTTCTACTTTGTATCGGTTTTTCTCGTTTTCATCTGCAAGATACCGATA ATTTTTGTGTTTCGTGATATCATATTTGTCCGAAAAGAATGGTCTGGCACCACGAATCTG CAGGATACATTTTCCGCCATCCATGACTGCAATCTCATCTTCCGTCATCAGCTGTTTGCC AGTTTTTTGATAATTCAATCCAAAAGACTTCTGATTACTCCTCGTTTCCGAAGTGTTATA CAGATCAATGGTTTCCTTACCCAGAAGCTCGCTCATTTCCTTTAAGGTAGTTTTCTCTTT TCCACCAAGGAATAGTGTGGTATCACAGTTACCCAGAATGGTATCTGCACTATCCTTGTA CATTGCCTTTAACTGGCTCTGTGACTGCAAAATAATAGAAGCAGAAATTTCCCTGCTTCG GATGGTCGCAATCAGCTTGTCAAACTGAGGAATTTGTCCGATGTTGGCAAACTCATCAGC AATGACACGCACATGAACTGGCAGTCTTCCACCATATTCATCATCTGCCTTGTCACAAAG CAGATTGAAAAGCTGTGACTGTAACATGGCAATCACAAAGTTAAAGGTTGTATCTGTATC GGACATAATCAAAAACAAGGCTGTCTTCCTGTCTCCGATCTTATCCAGTTCCATTTCATC ATAAGACATGATCTCACGAAGTTCTGCTATATCAAATGGTGCCAGCCTCGCACCACAGGA AATAAGAATACTTTTGGCAGTTTTGCCAGCCGCCATTTTGTATTTTTTATACTGTCTGAC CGCAAAGTGCTGCGGATCCCTTTCTTCCAGTTCCTGGAACATCATATCCACTGGATTCTG GTAAGTTTCATCCTCTTCACGGGTTTCGCTTTCATTCAAAAGATCCAGAAGGGTATTCAG ATTCTTTTCCTCTTCATCCCCTTCATACCAGATAAAAGCAATCAATGCTGTGTACAACAG CTTCTCTGCTTTCACCCAAAAATCTTCGGAAGCTTTTTCCCCTTCGCCTTTGGTATTTAC AATGATTGTTGTCACCAGCTTCAGGATATCTTTTTCAGACCGTATATAAGCAAATGGATT GTAATGAAGGGACTTGGAAAAATTGATGGTATTCAGAACCTTAATCACATATGGCTCATG TACCACTTTTCCAGATTTATCTTTCATAATATTTCCATTCTTATCTTTCTTAGGTGGTCC CTTTGCTAACATCTTCCCGCACTCTTCAATCAAAGTGCCTTTCGGATCTGTAATGACCAT GGAACAGTTCATCTGCATGACCGATGGTTTTACGAAAAAACGTGTCTTACCGGAACCACT GCCGCCGATGACCACTATATTTTTATTTCTTGCATACTTCGGCTGCTTCGGTCTGCTCTC CATGGTCAGTGCTTCTGTTGCTGTCAATGGAATGTTCATCCATGGATCTTCCGACATATA AGGCTTGATATCCTCTGCAGTTCCCCATCTGGCTGAACCATACTCGATGCCTTTCCGTAA TTTCTTTGCGTCTGCCTGTTTCTGCCAGACCAACACTTTCAGAACGACTGCAACAACAAT ACCTGCTAGCAGATCTTTCCAGTTATTGCTTAACATAAAACCAGCAAAAATCCGGTCTGC GTGTTCCATAGCATATAAAAGTTTGTTCCCCATATCTTCTCCCGGACTGTTCCGGTAAAG AAAAAATCCCCGGTCTGCATAGAAAGCAGCCAGAGCATAAGGGATATTTGTAAGAACCAG TTTCTTTTTATCCAGGGCGGACAGCTTACCCCCAATTTTATTCTTCCACTTCTGCATCAG AGTTTTGCCGCTTTTCTTTTTCATCGACTCTGCTCCTGATGCCGGTTCTTTACTTTGTCC TTCGTCTTCTTTGGCATCATTGCCCGGTAAGCTGCAAGACGCTTGTGAATGGAAGGCTTA TTTGCTTTTTGAATCTGTTTCTGGGAAAACTCACGGAAAGCAGCATTGAGGGCATCCTGA TCACGTCCCTTGAAGAATACCAGATAAACCGGTGGCTCTTTGCTCTTGTCTTTTTTCAGA GCATAATTGATCCCGTATTTTCTGGCATACCGTTCAAAGGACTTGATATTTTTGTCCGTA ATCTCGATATTGACCATCCCAGCATTCTGTTTTGCCAGCTCTTTTACCGTGACCTTTCCC TGTTTCGGCTGATTTTTCTGTGCTTTCTTCTCTACTGATTTCTGCTTCTGATGATGCAGA TACGCAACAAGAACCTTTTTCAACAGGTCTGCTGTAATCTTAGTAGCCCGAATACAGAAC GTGACCGTTTTCTGAGTTACCTCTTCCTGCATGACTTTTCCCTCCTTTCAGCGATTCAAC TGCTGTCCAGATCAATAATCATGGCAATCACCCCCTTTAATGAAAAGAGACAGATTAACC GGTAATCAGGTTCTGCACCTGTACGAGTTTTTCTGTCCCTTCTTCTTTTCTCTTATCTTC TCCACCACAATAGATGGGAACACACATTTCAAGTATTCTACTGTAAATACGCTGATGGGC AGTATCCAAATCTGTGGATTTCATTTCATTCAGTCCCAGATTTGTTGTTACGATCAGCGG AAGCATTTTACAATAGCGGCTGTCTATCACATTATAGACCTGCTCCAAAGCAAACTCGGA ATTTCGTTCTATTCCTAGATCATCAATAATCAACAGCGGATAATCCACAAGATTTTGTAT AATCTGGTTCTTATCTGCCTGATAGCTGGTCATTTCATTTAAAATCCTGGAAAAATTCGT CATCATGACACGTTCTCCCTGTTCCAAAAGTGCATTTGCAATACAGCCTGCAAAGAAACT TTTCCCAGTTCCAACTGGTCCCATCAAAAGCAATCCTACATTTTTTCTCTTCATATCTGT CCAGTTTTCTACATACTGCCTGGCAATTAGTGTCTTCTGGTTGCTTCCATTGTCATTTTC AAATTTCCATTCCCAGAATCTTCTTTCCCGAAGTCCGACGGATTTTCTCTGATAAAGCAG CCGCTGTGCTTCTTCCCGCTGCATCTTCTCATCCAGTTCCTGTCTGGCTTTCACCTCGCA TTCGCACAAACAGGACACTACATGCTCAAATCCCATCAGACTGACTTTCATCTGTTTTCT TTTTCCACAGATGCCACAATGAAGACATCCCTCTTTGTCCAGATAATCTGCTGTTACTTT ATTTTCCATCACAGGCTTTCTCCTTCCTGAAATTCATATTTATCCATTCCTGCCCTGGCT CCATCCCGTTCTGCCCAAAGACAGATTGTTGCAAAATGGTTCTGATATTCTTTTCCACTG GATTTCATATAAACAGAAAGATGATCAATTCGTTTCTGGTAATCCCATGGAAAAAGCATC ATCAACTCCCGCAGTTCAGCTTCCGACAGAACAACATTTTTAAATCTCCCATACAGACTG AATTTTTCTTCCAAAGCGGAAGTATTGCCCTTACTCTTATCAGTATGATTCTTTTCAGTC TTATTTATCTTAGTATTACTTCCATCCAGATTCTTGCAGTCCGGACTTCTATTTCTTTGC GTTCCGGACTTCCAGTTTCTTGCAATCCGGATTTCCAATTCTTTGCAGTCTGGATTTCCA GTTTCTGGCGTTCCAGAAGCAACGTATCTTACTGGCTTTCCTCTGATCCGTTTCACAAAA TTTTTCACATATATGACAGAAGGACGATTATTCCCCTGCCGATACCGTTCGATCAATCCA ATCCCATGCACACTGTCAAGCTCATAAAGAAGCTTTGTCACTGTCGTATGCGACATTCGC AACAGCTCCTGCAATTCTGCGATCGTGTAAATAATATAGACATAACCATCACCGTCAATC CAACCATTTTTCTTGGATAGGCTGATTCGATCAAGCAGAATTCCGTAAAGGAGCTTTGCG TCTGTGGACAGGCTTGCAAACTCTTTTTCTGTGAACAGAGCTTTTGGTATCCGAAAAAAA GAAAACTGGTCAGATTCTTCTGCTCTGAAATATTCAAAATCTGCCATAATATTTTCCTAC TCTTCTACATCGAAATCACAATTTGCCGCACTACCTGTACCATGACATAATTCATCAAGC ACATAATTGAATGCATTCATCGCCTCTTCCAAATAGATTTTCCTAGCCTCTTTATCACAC GCATACATATCGGCAATAAATCCTTCATCATTTCCTATTGCGTGTACCAGAGTCTCCAAA ACTTTCATAAATTTCTTTTTTGAACACTTTTTATTCTGCCTGTTCACATATTTCTGAATA TCCAGTACTCTATCAGCATTTTCCTCATTCTCTTCAAGAATTCCAAACGCCAGATCCATG CCAAATTCATAGCCATCACAGGAAATCTGATCAACATCAAGCTGTCCCAGCTCATCTCGA TAATTTCTTTCTTCCATTGAAGTCAGTGGTGTCCCATATTCATCCAGATATCCCATATCT GCAATTGTTTCCAGAATATCTCTGGATGCTTTCACCATTTTGTCCATAATGATTTCTCTT TCTTCCATCGGCATATTTGCCATAATGCTGTCTAATGTCATCATTGATTCTTCCTCCATC TCATTTTCATAAATATCGTTGATATAAAAGTGGTTTGCTTTTCCATTGTTCGGAATGATA CGCACCAGATTTCCAACCTCCACCAGTTCCTGTACTGCCTGATCTACCCCATATCTGGTT GTATTCAGGTCTTTCTTCATTTCACTTTTTGGATAAATTACATACAAATCCCCCTTACCA TCTACCCAACCATTCTGCACCGCAAATTTCAAACGATCCAGAAATAAGCTGTATAAAATC TTTGCTGTATTTGACAGATTTTTGTATTTTTCCATCTGGAACAGCACCTTCGGCACCTGC AGACAATCTACCGGCATATACTCCATCTTACTCATTGATTGTTTCCTCCTTCTGTTTGTA CAGCACTTCGGCTGAATTAATATTGATTTCCAACATCCCTACAAATACCTGATAGTACAG AAAGCATATCTGTTCATCCTCTCTTGCCAGATACAATCCTTCCAGTTCATCGGACGGATG TTTCATTCCATATACTGCCTGACAAATATCATGGATTTTCTCACATTCCACACTTCTAAG ATGCTGCTCCAAGGTGTGGTTAAATCTCTGCCAGTCCTCCAGTTTCTGATTTACTGACAT CATGCACTGGAACAGTTCCGCTGCTTCACATGCTGCTGACAGCACTACATTTTTGTTATT GATACTTCCATCGGCATTTTTCATATGCCCTACCATATACGCCTGATCTACTGAAACCAT CTTTTATCCTCCTCTATCTAAACGGCATTTCTTCTTCCATGCCCTCTGGGATCTCTAAGA ACCCTTCCGCATCTTCTGGAAACGGTGGTCTGTCAACCATTTTTGCACCTGCGAATTCAA TCCGGTTTGCATACACTTCGGTGGTATAAATCTTTTTCCCGGTATCCTTATCTTCATAAT TACCTGTGACAATCTCGCCTTCCACCATGACCTTCGTGCCCTGCATCAGATAATCTCTGG CAAATTCTGCTTTCTTTGCAAAAGCCTTTACCGGAATGAAACTGACTTCATCGGAATAAT TTCTTCTGACTGCCAGAACAAACTTGGCAATCTTATGAAGTCCTTTTTCATTCTCCACTT CGTTGTATCCGGGATTTCTTACCAATCGCCCGGAAATAACTGTTGTATTCATTGGCTTAA CCCTCCTATGCTTTCATTGATTTGTAACAGATGCCGATACATGGTCCACATTTTCCATAG GCACATCCGTAACATTCATCTTTTTCCAACTCTTCCTGCTTCATTTCATCGGCAAACATT CCTAACAGCGTTGTATAAATCTTTTTCATTGCAAGGAACTTTTCTTCTGCTTTTTCCATC TTCTCTTTATAAAATGGAATCAGTTCACGAAGAACTGGATGGAAACGTTCATTTTCATCA TCCCAGGCACAGGTTTTCATCATACAACGTGGCTGTTTCTCATAATTGCCCAGATAATAC GGGCAGAACGTACAGCCTCTTTCTTTAACAATTTCCACCGGAATTACTGGCATCTGACTT TTGATTTCCTTAGTTACATGCTTACTTTCAATTCGCTCTCTCATATTAAAAATCCTCCAA GAATATATATTTGCAAAAGGGACTTCCCCTGAATTGCCTGGTTTTAAGCACAAAAAAAGA GGCAGACTTACGATTTTTGTTTTCGCAAGCCTGCCTCTTATCAATCTAATATTCTATTTT CCAATGACATACCGTATAAACACGTATATCGCTCTAATCACATACACTGGAATCATGATA CTTCCAATCAATGCTCCAATGATGACACTTAATGCAGCCATCCCAAGTGTTGCTGTGGTA TCCATTCCTCTCGGAATCAGAATCAACCGCATTTTATGTATTCCAAATGGAAGTCCAGCA ATAAATACCCACCAGAACCAATCCGTCTGTCCACTGACCTTCATAATTGTTTTTGTCATC CAAAACCAGAATACCATAAATGCCAGTGGCAGAATCGATTTTTTAATTACATCTTCAATC GTCATCTTTTTTCTCCCTCTGTCTGATTCCTTCCGCCACCTCCCGATTAAGGTTTGCCAA TATTTCTCTAACCACAGGAGAATCCAATCGAAAGGTTTCCAGATCTTTCTCCGTAAGCTC CCTTCCGTTCGCATCATATCTTCGTACAATTTTTAAAGCCATACTTTCACTTCCTTCCTG CTGATAATCCTAATGTTTTCAACAAATGTTTAAACTTCTCTCTTTTTATCCGTTTAACAC GTATCTTTTCTATCTTTTTCAGATAGACTTGTATTCTCCTTGCCATATCTTCATTGCTCA TTCTTTACCCTCTCTTTCTGCCCACGATGCCAGAAGCATAAATATAATTTCTTCCATCTG AGTCTTTGTATATGTATCTGGAAAATATTGTTTCAATTTCTTCGCCGGAATCTGCACCTG AACTTTTTCAGTACTTTCATTCATGCAAATCTGGTCAATTTCTGAATACGTCAACATCCG CTCTTTTGAAATCTGCTTCAATTCCTTTGCCTGCTTCATGGAAGGTACCATATTGTGATT ACTCATATACTGAAATAATATCTGCTGCTCTTCAGTTCTCAAATAAGAAAGTTCAACAGC TGTGTTAAAGGGAAGCTTCTTCTCGTCTGCCAATTCTAATAGCTCTGCTACTAACTCTGT CAGATGAATATATCGAAGAATCTGTCTGGAACTATCTCCTGTATTCTGACTGACTTCTTC TGCCGCCAACTTCTTGCCAACTTGGCAAGAAGTTAAATCAGATCGTTTTCCCTGACGCTT TAACGCCTCATATTTCATTTTATAAGCAAATGCCTTTTCGCTGATCAACAGCTCTTCTCG TTGAATGTTGGAATCTACCATAATCACCGTCGCTTCATCATCTGTAAGATCTTTGATGAT AACCGGCATTTTCTCTAGTCCAGCAAGTTCACATGCTCGTTTTCGCCGATGACCAGCTAC CAGCTCATAACCACCGGATTCTCTCAACCGCACAATACCAGGAACCAACACGCCATATTG TGTAATACTTTCCGCTAATTCTTCCATTTTCTTATCATCTCTTACTTGAAACGGGTGATT CGTAAATGGATGAAGACTTCCTATTGCTATCTCACTAATTCCATTGGTTGTCTCTTCGTT TGTTCCAAACAATGCATCAAGCGGCTGTAAGGAAATGGGAGTTACTCTTTTTTTAGATGG CATCTTTCAGCACCTCCTCCGTCACTCTTCGATAGGCTTCTGTAGCTTTGCCTTTCGGAT CATAAGAGAAAATACTCTGTCCTTCTCTGACTGCTTCCTTCATTCTTACAGAAAATGGAA TATAATTATCAAAAATATGAATTTGACTTCCATATACATTTCTAAGAAGTTCCATATTAT TTCTGGCATCATTTGTATGAGCATCGACCATCGTGAACAGAATCCCACCGACCTGCAGCT TCGGATTAATCTGCTTACGAACCTTACCGATCGTTTTTAACAACTGCTGCAATCCTTTGA TTGGCAGATAGGACGCTTCAACTGGAATGAGGACTTCATCTGATGCAGCCAGCGCATTGA TCGTAATCATTCCCAATGATGGCATACAATCAATGATGACTGCATCATATTGATCCTTGA TACCATATAAAATCTGTTTCAATACATATTCCCTGCTCATTGCATTTACCAACTGTACTT CCGTACCTGCCAGTCCAATGTTAGAACAGATAATGTCTATTCCCTCTTTCTGATGTCTAA TATAACAGTCTGAAGGAATATCTTCATCTTTCATTACTGCATCCATAAGAGCTGTAAGTG TTTCATTACTGTCATCACAATCACGATATCCAAATCCTGCGCATACATCAGACTGGGGAT CGGCATCTACAATCAACACTTTCATATTCTTTTGTGCTAATCCTACTGCTAAATTAGCTG TACATGCGGATTTTCCCGTTCCCCCTTTTTGGTTTACAATAGAAATAATTCTAGCCATTT TTCATCACCTTTCATCGTCGTCAATCAAAAAGAGGACTGAATTAGACAACCGGAATCTAT ATTCCGTGCGAGCTAATTCAGTCCTATAATTACAATAATTCTGTTGTTTTTACTCTTGTC TTACACAAATCCATTTCCAGTCTGGATCTGTAATAATTCATATTCTGGAATGACAGCGCT GCCTTATTTTTCCCTTTTTCAGGGAGTTAAAAATAAGGACTAAATTAGTGCAACCCCTTG TATTTACTGGAGTTTTCTAACTTGTCCTTATTATAACTCGACCATGCGGTGTAATGACAG GCATCTGTACTTTGTAAGTATTATTATACTTCTGAATGATGTGTTGGAAATAATGCTCCC AGTGCAGGGAATAACAGATACTTTCATTTTTATCAAAGTATAAGAATCCACTTTTTCCAT CTACCATAGGTTCTGCTTTGGGTGGGTTTCGTTTTTCTATTATTTTCCGAAAGCATTCCT CTACATCTGCAGTCATAGGTATCTTTCTTGTTCCGCTGGTTGTTTTAGTCTCTTGAATAT AATATCCGATTTTTGATTTTTTCTGCAATTGATGATCGATGATGATCGTATGCTCCTTAA AATCAATGTCAGAAATGGTCAAACCACAAAATTCCGAGATGCGAAGGCCGGTTTTAAATA ATATGTAAATCCCCTCATAATACCTGCAAAAATGAGGATCCTCCTTCACAAACCGTAGGA ACTTTCGTTCCTCAGCCCTGCTGATTGCCTCTCTTGTCACACTGTCATTCACAACCACTT CCATTAGCTGAAACTGAAATGAATTTTTCCTGATCAGGTCATCATCCACTGCCAACTGAA ATGCCGGACGAAGAACTCCTCGGATTGAATGGATGGAACTATAACTTTTCTTTTCTACCT GCTGAAGATGTATCAGCCAACATTTTGCATCCGAAATCCGAACCGTATCAATCCTTCTTT TTCCAAATGGATCTTTCTTCAATAAATTGATAACTGTTCCGTATCCTGCAACTGTAGTAG GTCTGACACCGGTTTTTGTTGATGTATATTTTTCAACCAGTTCCAGTACCGTCATATTTC CGCCATTTGTTGCAATCTGCTCAAAATGGTCCGCCTGGATTTTCTTCTCCATCTCCCGAA GCGACAAAGTACGGCGCTTTCCTTTCGGAGTTGCATCGTTATGGTCTAAGCGCCAGCTAT ATACGCAGCGCTCCTTTCCCATCTCATCGACATACTTAAATCGATATCTGCCATCAGATA ACTGTATTTCTCCATTGTGTAATATACGTCCTCTATGATCTCTCCTTTTTTCACTCATAA TATTTTAGTCTCCTTCATCAAATGTTCATTTAACTTGGAAGACCGTCTCGGTTTATTCAT TATACCACAAGACCTTTCCTTCGCTAAGATAAAATGAATATTATTTTCATTACTATTTCT TCTATTCTGTCACTTAAACTGTGCTGGCTGTATCCAGATAATCTTCAAACAATTTCCTTT TGAATCGAATATGAGAACCTACTTCCAAAATGAAATCCGCTCCCTCATTTTCACCTGCGA TTTGTCTCAATCTCTTTTCTCCAATTCCGTAATATTCTGCTGCTTCGGATACATTTAAAG AATATTTCTCCCAAACAGGTATTGTTTTTTCTGTATGATTCATTCGCAGTCCTCCTCCCC TCTGTTTGTATTCAACAACGTTTTCGCTTTCTCCATTTTCATACTTGCAATCACTTCTCT CTTACTTGTGCCTCCAACATACATAGGCGTACACATTTCTAAAATACGGTCATAGATACG TCTTTTATCTAACATAGTCTCGTTTTTTATTTCTTTCAGCGGAAGATTGGTCGTAATGAT CAAAGGTCGTCCTGAACGGATTCTTCGATCTATGACGCTAAAAATAATTCCTAACGCATA TTCTGAATTTCGTTCCACTCCAAGATCATCAATAATCAAAAGCTGATAAGACGCCAATGC ATTGATATATTCCGTTTTGTCTGCCAGTGGAAATATATCATCAATAATGGTATTGAAATT TGTCATCTTTACCATTACTTCTTGCTTAAGAAGTTCATTGGCAATGCACCCCGCAATAAA ACTTTTCCCGGTACCAACCGGTCCCCAGAACAAACAGCCTATATGATTTCTTTTCATTTC CTCCCAGTTATCAACATATTTTTTTGCTCTATGCATTACCGTATCTGACATATCTGCATT CTCAAATGTCCACTCTTCCATTCTGCTCTCGTCAAAACAGATGCTCGTATTTCTGCTGAC TAATTCCCGGTGCTCTTTGTCTTTAAAATATTTTTGTTCTTCTTCATATACTTTTCTGTC ACAGGCACATTGCCTAGAATGTTTCTTCATTCCCATAAATCCACCCTTGGGGAAAAATGC TTCTTTCGCTTCACCACAGACTTTGCAGTATTTCAAGCCATCACTACCTACACATACAGT ATCTTCTTCTCTCATCACAAACTCTCTCCTTACCCATAGCAATAATTTACTTCATGATAT TTATTACTTTTATATTTCTCAGTTACTTTACTAGGTGCCACATTTCCGACTCCTCCACAG CCATTTTTACGACCAGATAAAGGTGGCTTTTCCGGCTCTGTTGCAACTATCTTTTCAACC GCCTTATTGTCAACCGGCTGTAAACCTATCTCATCAGATGGAATTTTCACATATAAATGA TTGGGTTTTGAAAATTCACCGGATCTGCGAACCAATAATCCCACATCATCTAATTCCTTC AACGCTGTTTTTACAGAAGATTTGCATTTATCGATTTGAACAGACAATTCATCTATTGGA AATATCAGATAAACATTTCCATACTTGTCTATCCAGCTATTCTTTCTCGATATCCGTGCC CGGTCATACAAAATCATATAAAGGAATTTTGCAGTTTGAGAAATTCGCAGCTTTAATAAA AACTTCGGAAACTGGAAGTACTGAAGCATCTGCTCTGACTCCTTCATGTATTCATATTTC AT
Region Details
| Region | 2 |
| Region Length | 18Kb |
| Completeness(score) | incomplete(30) |
| Specific Keyword | integrase,transposase |
| Region Position | 197458-215519 |
| # tRNA | 0 |
| # Total Proteins | 13 |
| # Phage Hit Proteins | 9 |
| # Hypothetical Proteins | 2 |
| Phage + Hypothetical Protein % | 84.6% |
| # Bacterial Proteins | 2 |
| Attachment Site | yes |
| # Phage Species | 9 |
| Most Common Phage Name(hit genes count) | PHAGE_Staphy_B166_NC_028859(1) PHAGE_Lactob_Ld3_NC_025421(1) PHAGE_Gordon_Bowser_NC_030930(1) PHAGE_Staphy_JS01_NC_021773(1) PHAGE_Staphy_SA12_NC_021801(1) PHAGE_Strept_315.1_NC_004584(1) PHAGE_Natria_PhiCh1_NC_004084(1) PHAGE_Staphy_StauST398_4_NC_023499(1) PHAGE_Lister_vB_LmoS_188_NC_028871(1) PHAGE_Entero_EF62phi_NC_017732(1) PHAGE_Rhizob_RHEph10_NC_034248(1) PHAGE_Brevib_Sundance_NC_028749(1) PHAGE_Temper_phiNIH1.1_NC_003157(1) PHAGE_Lactob_LF1_NC_019486(1) PHAGE_Bacill_PfEFR_5_NC_031055(1) PHAGE_Bacill_Pookie_NC_027394(1) PHAGE_Lactob_Ld25A_NC_025415(1) PHAGE_Strept_T12_NC_028700(1) PHAGE_Lactob_c5_NC_019449(1) PHAGE_Staphy_23MRA_NC_028775(1) PHAGE_Bacill_BM5_NC_029069(1) PHAGE_Strept_315.4_NC_004587(1) PHAGE_Lactob_LLKu_NC_022989(1) PHAGE_Strept_9874_NC_031023(1) PHAGE_Bacill_Pavlov_NC_028782(1) PHAGE_Lactob_phiLdb_NC_022762(1) PHAGE_Strept_9872_NC_031094(1) PHAGE_Bacill_Palmer_NC_028926(1) PHAGE_Mycoba_Adler_NC_023591(1) PHAGE_Strept_7201_NC_002185(1) PHAGE_Lactob_phiJB_NC_022775(1) PHAGE_Bacill_phBC6A52_NC_004821(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 7.69% |
| GC % | 41.14% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|QUIF01000002.1| Ruminococcus sp. AM45-2 AM45-2.Scaf2, whole genome shotgun 232282, gc%: 39.49%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 20 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 117677..117688 | attL | 0.0 | Showinfo_outline |
| 2 | complement(128107..128277) | PHAGE_Lactoc_bIL286_NC_002667: integrase; DW953_02235; phage(gi13095744) | 7.61e-08 | Showinfo_outline |
| 3 | complement(128399..129976) | PHAGE_Bacill_WBeta_NC_007734: putative site-specific recombinase; DW953_02240; phage(gi85701406) | 3.42e-20 | Showinfo_outline |
| 4 | complement(129973..131664) | PHAGE_Lactob_phiPYB5_NC_027982: putative integrase; DW953_02245; phage(gi937456185) | 2.38e-24 | Showinfo_outline |
| 5 | complement(131666..133357) | PHAGE_Bacill_Gamma_NC_007458: site-specific recombinase; DW953_02250; phage(gi77020163) | 7.89e-28 | Showinfo_outline |
| 6 | complement(133466..133714) | hypothetical protein; DW953_02255 | 0.0 | Showinfo_outline |
| 7 | complement(133695..134075) | PHAGE_Clostr_c_st_NC_007581: PemK family transcriptional regulator; DW953_02260; phage(gi80159713) | 4.42e-15 | Showinfo_outline |
| 8 | complement(134229..134411) | hypothetical protein; DW953_02265 | 0.0 | Showinfo_outline |
| 9 | complement(134652..135197) | PHAGE_Clostr_phi3626_NC_003524: putative sigma factor; DW953_02270; phage(gi20065995) | 6.63e-06 | Showinfo_outline |
| 10 | complement(135471..135944) | PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; DW953_02275; phage(gi300116744) | 1.08e-18 | Showinfo_outline |
| 11 | complement(136266..136697) | hypothetical protein; DW953_02280 | 0.0 | Showinfo_outline |
| 12 | complement(136702..136914) | sporulation initiation factor Spo0A; DW953_02285 | 0.0 | Showinfo_outline |
| 13 | 137010..137021 | attR | 0.0 | Showinfo_outline |
| 14 | complement(137066..137383) | PHAGE_Clostr_phiCD211_NC_029048: DNA-binding helix-turn-helix protein; DW953_02290; phage(gi981220892) | 1.63e-11 | Showinfo_outline |
| 15 | 137563..137769 | hypothetical protein; DW953_02295 | 0.0 | Showinfo_outline |
| 16 | complement(137846..138217) | hypothetical protein; DW953_02300 | 0.0 | Showinfo_outline |
| 17 | complement(138227..138799) | hypothetical protein; DW953_02305 | 0.0 | Showinfo_outline |
| 18 | complement(139050..139289) | hypothetical protein; DW953_02310 | 0.0 | Showinfo_outline |
| 19 | complement(139302..139514) | PHAGE_Entero_mEp390_NC_019721: hypothetical protein; DW953_02315; phage(gi428782707) | 2.05e-09 | Showinfo_outline |
| 20 | complement(139529..140776) | PHAGE_Bacill_SPbeta_NC_001884: IMPB/MUCB/SAMB family protein; DW953_02320; phage(gi9630142) | 5.48e-38 | Showinfo_outline |
Sequence
>117677..117688
AGCGGAATAAAA
Sequence
>complement(128107..128277)
RuminococcusspAM452PHVCRHTYCSNMAKSGMNPKALQYLMGHSDISVTLNTYTHVNLEDAREEVARIQVV
Sequence
>complement(128399..129976)
RuminococcusspAM452MTDLRKTAVYIRLSAEDDNVDGRAKKESDSVTSQRILLKSFVIDELGVAESDILEYVDDGVSGTHFKRQGFQQLQDDMKSGEIGCVVVKDFSRFGRDYLEVGFYIEYIFPLLQIRFISINDSYDSAASSGMTGGMNVALQNLIYNMYSLDLSKKISSAMQTRTKNGTRLPVNARYGYKKGKDGRLEVDPEAAKVVKMIFQMASEGTSFADITRELNRQAIATCDEQKLSRGDQVQFQRFDTIKKKHWSPTTVAAIVRDEIYIGTRIWGKTRCSMHTGHKAVLNDETEWVRLENHHTAIIDRALFEKANEMHPKKRRIIAESRTNFTLERRKKQPALLICANCGHSLLKETEHLLKCSDARTNGDPVCQSLVIRREPLEENILGLVHQYAASMLEKEKKVSSNRQCDYKEINTAELQKQSRQLTSEKMKLYDDYKDGRIDRDSYKQRAGKISVQLEEIKRKIEDAENSKKLLEQNELSDKIKLKDFLGIQKFDTEKLREIIKVIRVHSQDEIEIEWNFDDIFSEQR
Sequence
>complement(129973..131664)
RuminococcusspAM452MARKSRKNIPEVVSSATVQTEVSRPFRAGLYARISMETEETLERGTIETQVELMKNFVADTEDISVAEVYKDSDYSGTNFDRPGFVQMMEDIKHGKINCVIVKDLSRLGRNYVETSNYIERVFPFFHVRFLAVTDDFDSFREGVDLTVPLKNIINEFYSKDLAKKSSSAKKALWKKGKFTSAWEPYGYRKSEEDHHQLIIDEEAAEHLKSIFSMYMDGRNYSDIARQLNKDEVLSPTLQRKFYKTGEKPLPESKPWNNYEVKRVLQDVHCTGDSVFGKYQQSVFRENKQRNRPESEWVHVENTHEGIIDRELFQQVQSKIQEYTEAYKKKHQQNNGAIRNHNFYTGKIWCGGCGNRMTLSRERNGTFFYICGANTNHKSGGKQCKGHRVRKEYVDDDVLRLIQTHMKTVLDTEKMIQEMNAASKNQTQYLLLDKEVGKLRRELSRISKRKSDLYEDYSERLITEEEYIQFSRIYSNEIENIKSRLDTVLAAQVRYSQDYHIEEGWGNVIHTYMSKRKLTKEMADAFVDSIIIHGKYDYEIKLVYDDQFADLQKLKKEKEAQSR
Sequence
>complement(131666..133357)
RuminococcusspAM452MYQNINKIYHAAIYVRLSKEDGDISSSAKLESNSISNQKALILDFLKDKKDIEVVSVRVDDGYSGSNFERPAFQAMLEDIRRGIVDCVVVKDLSRFGREYIDSGKYIERLFPALGVRFIAINDNYDSLKGKNQADEIIIPFKNLINDAYCRDISIKIRSNLEIKRKKGECVTPFVAFGYRKTKTDKHKLEIDPSAGSVVQDIFKMKLRGMSQDAIANRLNELGILSPFEYKISSGSHYETGFRQKEQALWSSVTVRRILENEVYIGNLVQGKRTTPNHKVKQTYVKPEDDWIRIEKNHEPLVSDRDFEIVQRLLGMDTRTSPDQKQVYLLSGIAVCADCGAPMTRKVSTVAGKKYAYYLCSTNKETKRCSSHRIPEKDLENAVLVMLKQHIQNILHLKRVLEFVGTVPFQEINMKKLQDRLEKKKQETERCKELRMMLYSDMKEGIVSKEDYVELHAAYGKRLRNAEESIRAIQKEMDSELEKADNANTWLDYFVKYQDIEELSRTVVVELIRKIRVYDKKNIEITFDFDDCYQTLLNQLPAMGVDTVIDDDNNLQVKVKEVV
Sequence
>complement(133466..133714)
RuminococcusspAM452MTAEEYRNYLEQDFSDVDINEMTDLRMIKADRNKSLQERRDIFLNKVGNPYLVRIGNMKVKVRFANNGISMEQAFENMLLSV
Sequence
>complement(133695..134075)
RuminococcusspAM452MTIRRGDILWADLGMFPTTSVQGGVRPVIVVSNNKANTYSSVITVVPLTSRIYKKRYLPTHVFISKYDMTGIRKGSLALAEQVMSISTKCIIEKCGRVNKWSLDRVLKAVRIQMGMEGEGHDGRGI
Sequence
>complement(134229..134411)
RuminococcusspAM452MTCVRCDTLADPEKSVTGKPMNCWSLETRVFGLWSGVCIRAGYYSLPAYAGVTIRGIGDK
Sequence
>complement(134652..135197)
RuminococcusspAM452MILNRGPPSGFETSNKISNSGGTDMYIEHPYFYEGKYYANIDGEMIEITKEVAYAMNNFYRSSKAKKVEIKNELGEVVDKMLREVPYSGQSIDGEGFMIEDFPDLNCDVEHSVLTKMEQQDIHKVIDQLNTEERMIIYSIFFENKTQTQMAEIMGISRQVLAYKLKTILNKMREMYMKEFF
Sequence
>complement(135471..135944)
RuminococcusspAM452MDVNSLAHTKWECKYHIVFAPKYRRQVIYKQIRADVGEILGSLCRRKGIEIIEAECCPDHIHMLVRIPPKYSVSEIVGYLKGKSSLMIFERHANLKYKYGNRHFWCRGYYVDTVGKNTAKIKEYIQKQLKEDLEYDQMSLVEYIDPFTGEPVKKHNK
Sequence
>complement(136266..136697)
RuminococcusspAM452MKKKIIALISGAVILIIAAGSIYGKSEFGHKEGEPDVVGTFSVNRDENLTVVANRKNIEDREAFARELLQMYKDDSFYSTKFSTDRGYATSLDMNIYLWKEDIEDGESVMTAEYRPVEYGKDYDVVNNPDKFQLYIDGKEVEE
Sequence
>complement(136702..136914)
RuminococcusspAM452MREKTIYEKIAEKYNTTPEEVRREMQIAIDAGFDNPDPAVQEEWKKMTLKGDRPTPEEVVNYAVKKLKGK
Sequence
>137010..137021
AGCGGAATAAAA
Sequence
>complement(137066..137383)
RuminococcusspAM452MDLKAVGQRIKSAREAKNLTQEELAALVNLSPTHVSVIERGLKVTKLDTFVAIANALDVSADTLLIDVVAHSVTGVTNELTEKIEKLPIKEQKKIIKVIHTLLEE
Sequence
>137563..137769
RuminococcusspAM452MKSHKYWSLGALFCILGCIYSGIKKSMTAHKYFAYFSLLCMGMSIYSGHKLVPPKKKKITESNNSKNS
Sequence
>complement(137846..138217)
RuminococcusspAM452MRYEDSMKGVADQIIKEQQRASKIKNNPEEFHWHDEYATLNFFRFICKNIGNLGNGEIEKMVTRLKSIDQKAVENHVNGAVWAFDYDKMFCVLMENEICRKVCEKNKYNSWMKLIGQYCVSMA
Sequence
>complement(138227..138799)
RuminococcusspAM452MTDRDYAIKSMKEITFQMASHAQDYLEVTIERHYTDIKELMTSYQKLILENQIVLEELDMECQEKINEDMAYALSYLSIYNNQLNVPKMHREMNNLMIIYGLSDMIYRGMTLVKFYAPNGVMLSEILHSCFCSHYNKTDVEVQQELGIGRTSFYKMKKQALGYLGFYFYEIVVPQAKDKRFKPSLGVEEE
Sequence
>complement(139050..139289)
RuminococcusspAM452MNKVYVDVVAEFRKDGQLVPIFFTWEDGRKYSIDRILKIERCASRKAGGVGMMYTCMIQGQESHLFYEVDKWFMERKTA
Sequence
>complement(139302..139514)
RuminococcusspAM452MKKALTRKQEESYQCILRYTNEHGYPPTIREFGKLIGVKSTSSAFSRIKQLELNGYIRRIPASPRAIEIL
Sequence
>complement(139529..140776)
RuminococcusspAM452MSERVILHSDMNCFYASVEMLHHPEFAGMPLAVGGDPEARHGIVLTANYIAKQKGVKTGMALWQAKQICPEIIFVPPRMDLYLRFSQMAREVYSEYTDKIEPYGIDEAWLDVSDSRNLKGSGMTIAREISHRIKYELGVTVSIGISWNKIYAKLGSDYKKPDAITEFNRENYKDRIWQLPASDLLYVGRQTNKKLQKLGIRTIGQLAESDEKLLESHFGKIGNVLWAFANGWDEDPVCKEGYEAPVKSIGNSTTTPRDLENDLDVWIIQIALAESVAARLRKHGFKCKTVEITVRDNRLYSFSRQIHLRQPTNITNEIVTAAFQLFKDNYKWEHPIRSLGIRAADLVLDDIPVQLDLFGNQEKKEKLEKLDRTVDEIRRRFGYFSIQRAAMYQDKVLSHLDAGTHTIHPHSYFHG
Region 2, total 15 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 197458..197471 | attL | 0.0 | Showinfo_outline |
| 2 | complement(206392..207186) | PHAGE_Bacill_BM5_NC_029069: hypothetical protein; DW953_02575; phage(gi985757818) | 2.18e-23 | Showinfo_outline |
| 3 | complement(207186..208004) | PHAGE_Strept_9874_NC_031023: hypothetical protein; DW953_02580; phage(gi100032) | 8.59e-19 | Showinfo_outline |
| 4 | complement(208014..208892) | PHAGE_Strept_7201_NC_002185: ORF4; DW953_02585; phage(gi9634630) | 2.64e-11 | Showinfo_outline |
| 5 | complement(208885..209277) | hypothetical protein; DW953_02590 | 0.0 | Showinfo_outline |
| 6 | complement(209291..209689) | PHAGE_Staphy_23MRA_NC_028775: single-stranded DNA-binding protein; DW953_02595; phage(gi971742276) | 1.11e-14 | Showinfo_outline |
| 7 | complement(209703..210101) | hypothetical protein; DW953_02600 | 0.0 | Showinfo_outline |
| 8 | complement(210231..210542) | MFS transporter; DW953_02605 | 0.0 | Showinfo_outline |
| 9 | complement(210835..211740) | PHAGE_Strept_315.4_NC_004587: hypothetical protein; DW953_02610; phage(gi28876350) | 1.65e-05 | Showinfo_outline |
| 10 | complement(211730..212515) | PHAGE_Natria_PhiCh1_NC_004084: putative plasmid partitioning protein Soj; DW953_02615; phage(gi22091150) | 1.00e-25 | Showinfo_outline |
| 11 | 212517..212530 | attR | 0.0 | Showinfo_outline |
| 12 | complement(212774..213835) | PHAGE_Lactob_phiJB_NC_022775: integrase; DW953_02620; phage(gi571797859) | 1.14e-08 | Showinfo_outline |
| 13 | complement(213971..214180) | transposase; DW953_02625 | 0.0 | Showinfo_outline |
| 14 | complement(214177..214992) | PHAGE_Lactob_c5_NC_019449: putative DnaC; DW953_02630; phage(gi418488188) | 1.19e-24 | Showinfo_outline |
| 15 | complement(215007..215519) | PHAGE_Strept_9872_NC_031094: hypothetical protein; DW953_02635; phage(gi100030) | 2.16e-14 | Showinfo_outline |
Sequence
>197458..197471
TTTCATCACCTTTC
Sequence
>complement(206392..207186)
RuminococcusspAM452MENKVTADYLDKEGCLHCGICGKRKQMKVSLMGFEHVVSCLCECEVKARQELDEKMQREEAQRLLYQRKSVGLRERRFWEWKFENDNGSNQKTLIARQYVENWTDMKRKNVGLLLMGPVGTGKSFFAGCIANALLEQGERVMMTNFSRILNEMTSYQADKNQIIQNLVDYPLLIIDDLGIERNSEFALEQVYNVIDSRYCKMLPLIVTTNLGLNEMKSTDLDTAHQRIYSRILEMCVPIYCGGEDKRKEEGTEKLVQVQNLITG
Sequence
>complement(207186..208004)
RuminococcusspAM452MADFEYFRAEESDQFSFFRIPKALFTEKEFASLSTDAKLLYGILLDRISLSKKNGWIDGDGYVYIIYTIAELQELLRMSHTTVTKLLYELDSVHGIGLIERYRQGNNRPSVIYVKNFVKRIRGKPVRYVASGTPETGNPDCKELEIRIARNWKSGTQRNRSPDCKNLDGSNTKINKTEKNHTDKSKGNTSALEEKFSLYGRFKNVVLSEAELRELMMLFPWDYQKRIDHLSVYMKSSGKEYQNHFATICLWAERDGARAGMDKYEFQEGESL
Sequence
>complement(208014..208892)
RuminococcusspAM452MSKMEYMPVDCLQVPKVLFQMEKYKNLSNTAKILYSLFLDRLKFAVQNGWVDGKGDLYVIYPKSEMKKDLNTTRYGVDQAVQELVEVGNLVRIIPNNGKANHFYINDIYENEMEEESMMTLDSIMANMPMEEREIIMDKMVKASRDILETIADMGYLDEYGTPLTSMEERNYRDELGQLDVDQISCDGYEFGMDLAFGILEENEENADRVLDIQKYVNRQNKKCSKKKFMKVLETLVHAIGNDEGFIADMYACDKEARKIYLEEAMNAFNYVLDELCHGTGSAANCDFDVEE
Sequence
>complement(208885..209277)
RuminococcusspAM452MVSVDQAYMVGHMKNADGSINNKNVVLSAACEAAELFQCMMSVNQKLEDWQRFNHTLEQHLRSVECEKIHDICQAVYGMKHPSDELEGLYLAREDEQICFLYYQVFVGMLEININSAEVLYKQKEETINE
Sequence
>complement(209291..209689)
RuminococcusspAM452MNTTVISGRLVRNPGYNEVENEKGLHKIAKFVLAVRRNYSDEVSFIPVKAFAKKAEFARDYLMQGTKVMVEGEIVTGNYEDKDTGKKIYTTEVYANRIEFAGAKMVDRPPFPEDAEGFLEIPEGMEEEMPFR
Sequence
>complement(209703..210101)
RuminococcusspAM452MRERIESKHVTKEIKSQMPVIPVEIVKERGCTFCPYYLGNYEKQPRCMMKTCAWDDENERFHPVLRELIPFYKEKMEKAEEKFLAMKKIYTTLLGMFADEMKQEELEKDECYGCAYGKCGPCIGICYKSMKA
Sequence
>complement(210231..210542)
RuminococcusspAM452MTIEDVIKKSILPLAFMVFWFWMTKTIMKVSGQTDWFWWVFIAGLPFGIHKMRLILIPRGMDTTATLGMAALSVIIGALIGSIMIPVYVIRAIYVFIRYVIGK
Sequence
>complement(210835..211740)
RuminococcusspAM452MPSKKRVTPISLQPLDALFGTNEETTNGISEIAIGSLHPFTNHPFQVRDDKKMEELAESITQYGVLVPGIVRLRESGGYELVAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNIQREELLISEKAFAYKMKYEALKRQGKRSDLTSCQVGKKLAAEEVSQNTGDSSRQILRYIHLTELVAELLELADEKKLPFNTAVELSYLRTEEQQILFQYMSNHNMVPSMKQAKELKQISKERMLTYSEIDQICMNESTEKVQVQIPAKKLKQYFPDTYTKTQMEEIIFMLLASWAEREGKE
Sequence
>complement(211730..212515)
RuminococcusspAM452MARIISIVNQKGGTGKSACTANLAVGLAQKNMKVLIVDADPQSDVCAGFGYRDCDDSNETLTALMDAVMKDEDIPSDCYIRHQKEGIDIICSNIGLAGTEVQLVNAMSREYVLKQILYGIKDQYDAVIIDCMPSLGMITINALAASDEVLIPVEASYLPIKGLQQLLKTIGKVRKQINPKLQVGGILFTMVDAHTNDARNNMELLRNVYGSQIHIFDNYIPFSVRMKEAVREGQSIFSYDPKGKATEAYRRVTEEVLKDAI
Sequence
>212517..212530
TTTCATCACCTTTC
Sequence
>complement(212774..213835)
RuminococcusspAM452MSEKRRDHRGRILHNGEIQLSDGRYRFKYVDEMGKERCVYSWRLDHNDATPKGKRRTLSLREMEKKIQADHFEQIATNGGNMTVLELVEKYTSTKTGVRPTTVAGYGTVINLLKKDPFGKRRIDTVRISDAKCWLIHLQQVEKKSYSSIHSIRGVLRPAFQLAVDDDLIRKNSFQFQLMEVVVNDSVTREAISRAEERKFLRFVKEDPHFCRYYEGIYILFKTGLRISEFCGLTISDIDFKEHTIIIDHQLQKKSKIGYYIQETKTTSGTRKIPMTADVEECFRKIIEKRNPPKAEPMVDGKSGFLYFDKNESICYSLHWEHYFQHIIQKYNNTYKVQMPVITPHGRVIIRTS
Sequence
>complement(213971..214180)
RuminococcusspAM452MNHTEKTIPVWEKYSLNVSEAAEYYGIGEKRLRQIAGENEGADFILEVGSHIRFKRKLFEDYLDTASTV
Sequence
>complement(214177..214992)
RuminococcusspAM452MREEDTVCVGSDGLKYCKVCGEAKEAFFPKGGFMGMKKHSRQCACDRKVYEEEQKYFKDKEHRELVSRNTSICFDESRMEEWTFENADMSDTVMHRAKKYVDNWEEMKRNHIGCLFWGPVGTGKSFIAGCIANELLKQEVMVKMTNFNTIIDDIFPLADKTEYINALASYQLLIIDDLGVERNSEYALGIIFSVIDRRIRSGRPLIITTNLPLKEIKNETMLDKRRIYDRILEMCTPMYVGGTSKREVIASMKMEKAKTLLNTNRGEEDCE
Sequence
>complement(215007..215519)
RuminococcusspAM452MKYEYMKESEQMLQYFQFPKFLLKLRISQTAKFLYMILYDRARISRKNSWIDKYGNVYLIFPIDELSVQIDKCKSSVKTALKELDDVGLLVRRSGEFSKPNHLYVKIPSDEIGLQPVDNKAVEKIVATEPEKPPLSGRKNGCGGVGNVAPSKVTEKYKSNKYHEVNYCYG
Ruminococcus sp. AM45-2 AM45-2
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 232282 bps
Phages: 2
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Locus 1: attL (Region 1)
Locus: attLORF Start: 117677
ORF Stop: 117688
Strand: Forward
Protein Sequence: AGCGGAATAAAA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: DW953_02235 (Region 1)
Locus: DW953_02235ORF Start: 128107
ORF Stop: 128277
Strand: Backward
Protein Sequence: PHVCRHTYCSNMAKSGMNPKALQYLMGHSDISVTLNTYTHVNLEDAREEVARIQVV
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: DW953_02235, integrase, phage(gi13095744), PHAGE_Lactoc_bIL286_NC_002667
Homolog/Ortholog E-Value: 7.61e-08
Locus 3: DW953_02240 (Region 1)
Locus: DW953_02240ORF Start: 128399
ORF Stop: 129976
Strand: Backward
Protein Sequence: MTDLRKTAVYIRLSAEDDNVDGRAKKESDSVTSQRILLKSFVIDELGVAESDILEYVDDGVSGTHFKRQGFQQLQDDMKSGEIGCVVVKDFSRFGRDYLEVGFYIEYIFPLLQIRFISINDSYDSAASSGMTGGMNVALQNLIYNMYSLDLSKKISSAMQTRTKNGTRLPVNARYGYKKGKDGRLEVDPEAAKVVKMIFQMASEGTSFADITRELNRQAIATCDEQKLSRGDQVQFQRFDTIKKKHWSPTTVAAIVRDEIYIGTRIWGKTRCSMHTGHKAVLNDETEWVRLENHHTAIIDRALFEKANEMHPKKRRIIAESRTNFTLERRKKQPALLICANCGHSLLKETEHLLKCSDARTNGDPVCQSLVIRREPLEENILGLVHQYAASMLEKEKKVSSNRQCDYKEINTAELQKQSRQLTSEKMKLYDDYKDGRIDRDSYKQRAGKISVQLEEIKRKIEDAENSKKLLEQNELSDKIKLKDFLGIQKFDTEKLREIIKVIRVHSQDEIEIEWNFDDIFSEQR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02240, putative site-specific recombinase, phage(gi85701406), PHAGE_Bacill_WBeta_NC_007734
Homolog/Ortholog E-Value: 3.42e-20
Locus 4: DW953_02245 (Region 1)
Locus: DW953_02245ORF Start: 129973
ORF Stop: 131664
Strand: Backward
Protein Sequence: MARKSRKNIPEVVSSATVQTEVSRPFRAGLYARISMETEETLERGTIETQVELMKNFVADTEDISVAEVYKDSDYSGTNFDRPGFVQMMEDIKHGKINCVIVKDLSRLGRNYVETSNYIERVFPFFHVRFLAVTDDFDSFREGVDLTVPLKNIINEFYSKDLAKKSSSAKKALWKKGKFTSAWEPYGYRKSEEDHHQLIIDEEAAEHLKSIFSMYMDGRNYSDIARQLNKDEVLSPTLQRKFYKTGEKPLPESKPWNNYEVKRVLQDVHCTGDSVFGKYQQSVFRENKQRNRPESEWVHVENTHEGIIDRELFQQVQSKIQEYTEAYKKKHQQNNGAIRNHNFYTGKIWCGGCGNRMTLSRERNGTFFYICGANTNHKSGGKQCKGHRVRKEYVDDDVLRLIQTHMKTVLDTEKMIQEMNAASKNQTQYLLLDKEVGKLRRELSRISKRKSDLYEDYSERLITEEEYIQFSRIYSNEIENIKSRLDTVLAAQVRYSQDYHIEEGWGNVIHTYMSKRKLTKEMADAFVDSIIIHGKYDYEIKLVYDDQFADLQKLKKEKEAQSR
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: DW953_02245, putative integrase, phage(gi937456185), PHAGE_Lactob_phiPYB5_NC_027982
Homolog/Ortholog E-Value: 2.38e-24
Locus 5: DW953_02250 (Region 1)
Locus: DW953_02250ORF Start: 131666
ORF Stop: 133357
Strand: Backward
Protein Sequence: MYQNINKIYHAAIYVRLSKEDGDISSSAKLESNSISNQKALILDFLKDKKDIEVVSVRVDDGYSGSNFERPAFQAMLEDIRRGIVDCVVVKDLSRFGREYIDSGKYIERLFPALGVRFIAINDNYDSLKGKNQADEIIIPFKNLINDAYCRDISIKIRSNLEIKRKKGECVTPFVAFGYRKTKTDKHKLEIDPSAGSVVQDIFKMKLRGMSQDAIANRLNELGILSPFEYKISSGSHYETGFRQKEQALWSSVTVRRILENEVYIGNLVQGKRTTPNHKVKQTYVKPEDDWIRIEKNHEPLVSDRDFEIVQRLLGMDTRTSPDQKQVYLLSGIAVCADCGAPMTRKVSTVAGKKYAYYLCSTNKETKRCSSHRIPEKDLENAVLVMLKQHIQNILHLKRVLEFVGTVPFQEINMKKLQDRLEKKKQETERCKELRMMLYSDMKEGIVSKEDYVELHAAYGKRLRNAEESIRAIQKEMDSELEKADNANTWLDYFVKYQDIEELSRTVVVELIRKIRVYDKKNIEITFDFDDCYQTLLNQLPAMGVDTVIDDDNNLQVKVKEVV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02250, site-specific recombinase, phage(gi77020163), PHAGE_Bacill_Gamma_NC_007458
Homolog/Ortholog E-Value: 7.89e-28
Locus 6: DW953_02255 (Region 1)
Locus: DW953_02255ORF Start: 133466
ORF Stop: 133714
Strand: Backward
Protein Sequence: MTAEEYRNYLEQDFSDVDINEMTDLRMIKADRNKSLQERRDIFLNKVGNPYLVRIGNMKVKVRFANNGISMEQAFENMLLSV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02255, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 7: DW953_02260 (Region 1)
Locus: DW953_02260ORF Start: 133695
ORF Stop: 134075
Strand: Backward
Protein Sequence: MTIRRGDILWADLGMFPTTSVQGGVRPVIVVSNNKANTYSSVITVVPLTSRIYKKRYLPTHVFISKYDMTGIRKGSLALAEQVMSISTKCIIEKCGRVNKWSLDRVLKAVRIQMGMEGEGHDGRGI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02260, PemK family transcriptional regulator, phage(gi80159713), PHAGE_Clostr_c_st_NC_007581
Homolog/Ortholog E-Value: 4.42e-15
Locus 8: DW953_02265 (Region 1)
Locus: DW953_02265ORF Start: 134229
ORF Stop: 134411
Strand: Backward
Protein Sequence: MTCVRCDTLADPEKSVTGKPMNCWSLETRVFGLWSGVCIRAGYYSLPAYAGVTIRGIGDK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02265, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: DW953_02270 (Region 1)
Locus: DW953_02270ORF Start: 134652
ORF Stop: 135197
Strand: Backward
Protein Sequence: MILNRGPPSGFETSNKISNSGGTDMYIEHPYFYEGKYYANIDGEMIEITKEVAYAMNNFYRSSKAKKVEIKNELGEVVDKMLREVPYSGQSIDGEGFMIEDFPDLNCDVEHSVLTKMEQQDIHKVIDQLNTEERMIIYSIFFENKTQTQMAEIMGISRQVLAYKLKTILNKMREMYMKEFF
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02270, putative sigma factor, phage(gi20065995), PHAGE_Clostr_phi3626_NC_003524
Homolog/Ortholog E-Value: 6.63e-06
Locus 10: DW953_02275 (Region 1)
Locus: DW953_02275ORF Start: 135471
ORF Stop: 135944
Strand: Backward
Protein Sequence: MDVNSLAHTKWECKYHIVFAPKYRRQVIYKQIRADVGEILGSLCRRKGIEIIEAECCPDHIHMLVRIPPKYSVSEIVGYLKGKSSLMIFERHANLKYKYGNRHFWCRGYYVDTVGKNTAKIKEYIQKQLKEDLEYDQMSLVEYIDPFTGEPVKKHNK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02275, IS element Dka2 orfA, phage(gi300116744), PHAGE_Hypert_2_NC_014321
Homolog/Ortholog E-Value: 1.08e-18
Locus 11: DW953_02280 (Region 1)
Locus: DW953_02280ORF Start: 136266
ORF Stop: 136697
Strand: Backward
Protein Sequence: MKKKIIALISGAVILIIAAGSIYGKSEFGHKEGEPDVVGTFSVNRDENLTVVANRKNIEDREAFARELLQMYKDDSFYSTKFSTDRGYATSLDMNIYLWKEDIEDGESVMTAEYRPVEYGKDYDVVNNPDKFQLYIDGKEVEE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02280, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 12: DW953_02285 (Region 1)
Locus: DW953_02285ORF Start: 136702
ORF Stop: 136914
Strand: Backward
Protein Sequence: MREKTIYEKIAEKYNTTPEEVRREMQIAIDAGFDNPDPAVQEEWKKMTLKGDRPTPEEVVNYAVKKLKGK
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DW953_02285, sporulation initiation factor Spo0A
Homolog/Ortholog E-Value: N/A
Locus 13: attR (Region 1)
Locus: attRORF Start: 137010
ORF Stop: 137021
Strand: Forward
Protein Sequence: AGCGGAATAAAA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 14: DW953_02290 (Region 1)
Locus: DW953_02290ORF Start: 137066
ORF Stop: 137383
Strand: Backward
Protein Sequence: MDLKAVGQRIKSAREAKNLTQEELAALVNLSPTHVSVIERGLKVTKLDTFVAIANALDVSADTLLIDVVAHSVTGVTNELTEKIEKLPIKEQKKIIKVIHTLLEE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02290, DNA-binding helix-turn-helix protein, phage(gi981220892), PHAGE_Clostr_phiCD211_NC_029048
Homolog/Ortholog E-Value: 1.63e-11
Locus 15: DW953_02295 (Region 1)
Locus: DW953_02295ORF Start: 137563
ORF Stop: 137769
Strand: Forward
Protein Sequence: MKSHKYWSLGALFCILGCIYSGIKKSMTAHKYFAYFSLLCMGMSIYSGHKLVPPKKKKITESNNSKNS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02295, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 16: DW953_02300 (Region 1)
Locus: DW953_02300ORF Start: 137846
ORF Stop: 138217
Strand: Backward
Protein Sequence: MRYEDSMKGVADQIIKEQQRASKIKNNPEEFHWHDEYATLNFFRFICKNIGNLGNGEIEKMVTRLKSIDQKAVENHVNGAVWAFDYDKMFCVLMENEICRKVCEKNKYNSWMKLIGQYCVSMA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02300, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 17: DW953_02305 (Region 1)
Locus: DW953_02305ORF Start: 138227
ORF Stop: 138799
Strand: Backward
Protein Sequence: MTDRDYAIKSMKEITFQMASHAQDYLEVTIERHYTDIKELMTSYQKLILENQIVLEELDMECQEKINEDMAYALSYLSIYNNQLNVPKMHREMNNLMIIYGLSDMIYRGMTLVKFYAPNGVMLSEILHSCFCSHYNKTDVEVQQELGIGRTSFYKMKKQALGYLGFYFYEIVVPQAKDKRFKPSLGVEEE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02305, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 18: DW953_02310 (Region 1)
Locus: DW953_02310ORF Start: 139050
ORF Stop: 139289
Strand: Backward
Protein Sequence: MNKVYVDVVAEFRKDGQLVPIFFTWEDGRKYSIDRILKIERCASRKAGGVGMMYTCMIQGQESHLFYEVDKWFMERKTA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02310, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 19: DW953_02315 (Region 1)
Locus: DW953_02315ORF Start: 139302
ORF Stop: 139514
Strand: Backward
Protein Sequence: MKKALTRKQEESYQCILRYTNEHGYPPTIREFGKLIGVKSTSSAFSRIKQLELNGYIRRIPASPRAIEIL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02315, hypothetical protein, phage(gi428782707), PHAGE_Entero_mEp390_NC_019721
Homolog/Ortholog E-Value: 2.05e-09
Locus 20: DW953_02320 (Region 1)
Locus: DW953_02320ORF Start: 139529
ORF Stop: 140776
Strand: Backward
Protein Sequence: MSERVILHSDMNCFYASVEMLHHPEFAGMPLAVGGDPEARHGIVLTANYIAKQKGVKTGMALWQAKQICPEIIFVPPRMDLYLRFSQMAREVYSEYTDKIEPYGIDEAWLDVSDSRNLKGSGMTIAREISHRIKYELGVTVSIGISWNKIYAKLGSDYKKPDAITEFNRENYKDRIWQLPASDLLYVGRQTNKKLQKLGIRTIGQLAESDEKLLESHFGKIGNVLWAFANGWDEDPVCKEGYEAPVKSIGNSTTTPRDLENDLDVWIIQIALAESVAARLRKHGFKCKTVEITVRDNRLYSFSRQIHLRQPTNITNEIVTAAFQLFKDNYKWEHPIRSLGIRAADLVLDDIPVQLDLFGNQEKKEKLEKLDRTVDEIRRRFGYFSIQRAAMYQDKVLSHLDAGTHTIHPHSYFHG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02320, IMPB/MUCB/SAMB family protein, phage(gi9630142), PHAGE_Bacill_SPbeta_NC_001884
Homolog/Ortholog E-Value: 5.48e-38
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Click on a sequence to see details.
Locus 1: attL (Region 2)
Locus: attLORF Start: 197458
ORF Stop: 197471
Strand: Forward
Protein Sequence: TTTCATCACCTTTC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: DW953_02575 (Region 2)
Locus: DW953_02575ORF Start: 206392
ORF Stop: 207186
Strand: Backward
Protein Sequence: MENKVTADYLDKEGCLHCGICGKRKQMKVSLMGFEHVVSCLCECEVKARQELDEKMQREEAQRLLYQRKSVGLRERRFWEWKFENDNGSNQKTLIARQYVENWTDMKRKNVGLLLMGPVGTGKSFFAGCIANALLEQGERVMMTNFSRILNEMTSYQADKNQIIQNLVDYPLLIIDDLGIERNSEFALEQVYNVIDSRYCKMLPLIVTTNLGLNEMKSTDLDTAHQRIYSRILEMCVPIYCGGEDKRKEEGTEKLVQVQNLITG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02575, hypothetical protein, phage(gi985757818), PHAGE_Bacill_BM5_NC_029069
Homolog/Ortholog E-Value: 2.18e-23
Locus 3: DW953_02580 (Region 2)
Locus: DW953_02580ORF Start: 207186
ORF Stop: 208004
Strand: Backward
Protein Sequence: MADFEYFRAEESDQFSFFRIPKALFTEKEFASLSTDAKLLYGILLDRISLSKKNGWIDGDGYVYIIYTIAELQELLRMSHTTVTKLLYELDSVHGIGLIERYRQGNNRPSVIYVKNFVKRIRGKPVRYVASGTPETGNPDCKELEIRIARNWKSGTQRNRSPDCKNLDGSNTKINKTEKNHTDKSKGNTSALEEKFSLYGRFKNVVLSEAELRELMMLFPWDYQKRIDHLSVYMKSSGKEYQNHFATICLWAERDGARAGMDKYEFQEGESL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02580, hypothetical protein, phage(gi100032), PHAGE_Strept_9874_NC_031023
Homolog/Ortholog E-Value: 8.59e-19
Locus 4: DW953_02585 (Region 2)
Locus: DW953_02585ORF Start: 208014
ORF Stop: 208892
Strand: Backward
Protein Sequence: MSKMEYMPVDCLQVPKVLFQMEKYKNLSNTAKILYSLFLDRLKFAVQNGWVDGKGDLYVIYPKSEMKKDLNTTRYGVDQAVQELVEVGNLVRIIPNNGKANHFYINDIYENEMEEESMMTLDSIMANMPMEEREIIMDKMVKASRDILETIADMGYLDEYGTPLTSMEERNYRDELGQLDVDQISCDGYEFGMDLAFGILEENEENADRVLDIQKYVNRQNKKCSKKKFMKVLETLVHAIGNDEGFIADMYACDKEARKIYLEEAMNAFNYVLDELCHGTGSAANCDFDVEE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02585, ORF4, phage(gi9634630), PHAGE_Strept_7201_NC_002185
Homolog/Ortholog E-Value: 2.64e-11
Locus 5: DW953_02590 (Region 2)
Locus: DW953_02590ORF Start: 208885
ORF Stop: 209277
Strand: Backward
Protein Sequence: MVSVDQAYMVGHMKNADGSINNKNVVLSAACEAAELFQCMMSVNQKLEDWQRFNHTLEQHLRSVECEKIHDICQAVYGMKHPSDELEGLYLAREDEQICFLYYQVFVGMLEININSAEVLYKQKEETINE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02590, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 6: DW953_02595 (Region 2)
Locus: DW953_02595ORF Start: 209291
ORF Stop: 209689
Strand: Backward
Protein Sequence: MNTTVISGRLVRNPGYNEVENEKGLHKIAKFVLAVRRNYSDEVSFIPVKAFAKKAEFARDYLMQGTKVMVEGEIVTGNYEDKDTGKKIYTTEVYANRIEFAGAKMVDRPPFPEDAEGFLEIPEGMEEEMPFR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02595, single-stranded DNA-binding protein, phage(gi971742276), PHAGE_Staphy_23MRA_NC_028775
Homolog/Ortholog E-Value: 1.11e-14
Locus 7: DW953_02600 (Region 2)
Locus: DW953_02600ORF Start: 209703
ORF Stop: 210101
Strand: Backward
Protein Sequence: MRERIESKHVTKEIKSQMPVIPVEIVKERGCTFCPYYLGNYEKQPRCMMKTCAWDDENERFHPVLRELIPFYKEKMEKAEEKFLAMKKIYTTLLGMFADEMKQEELEKDECYGCAYGKCGPCIGICYKSMKA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02600, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 8: DW953_02605 (Region 2)
Locus: DW953_02605ORF Start: 210231
ORF Stop: 210542
Strand: Backward
Protein Sequence: MTIEDVIKKSILPLAFMVFWFWMTKTIMKVSGQTDWFWWVFIAGLPFGIHKMRLILIPRGMDTTATLGMAALSVIIGALIGSIMIPVYVIRAIYVFIRYVIGK
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DW953_02605, MFS transporter
Homolog/Ortholog E-Value: N/A
Locus 9: DW953_02610 (Region 2)
Locus: DW953_02610ORF Start: 210835
ORF Stop: 211740
Strand: Backward
Protein Sequence: MPSKKRVTPISLQPLDALFGTNEETTNGISEIAIGSLHPFTNHPFQVRDDKKMEELAESITQYGVLVPGIVRLRESGGYELVAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNIQREELLISEKAFAYKMKYEALKRQGKRSDLTSCQVGKKLAAEEVSQNTGDSSRQILRYIHLTELVAELLELADEKKLPFNTAVELSYLRTEEQQILFQYMSNHNMVPSMKQAKELKQISKERMLTYSEIDQICMNESTEKVQVQIPAKKLKQYFPDTYTKTQMEEIIFMLLASWAEREGKE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02610, hypothetical protein, phage(gi28876350), PHAGE_Strept_315.4_NC_004587
Homolog/Ortholog E-Value: 1.65e-05
Locus 10: DW953_02615 (Region 2)
Locus: DW953_02615ORF Start: 211730
ORF Stop: 212515
Strand: Backward
Protein Sequence: MARIISIVNQKGGTGKSACTANLAVGLAQKNMKVLIVDADPQSDVCAGFGYRDCDDSNETLTALMDAVMKDEDIPSDCYIRHQKEGIDIICSNIGLAGTEVQLVNAMSREYVLKQILYGIKDQYDAVIIDCMPSLGMITINALAASDEVLIPVEASYLPIKGLQQLLKTIGKVRKQINPKLQVGGILFTMVDAHTNDARNNMELLRNVYGSQIHIFDNYIPFSVRMKEAVREGQSIFSYDPKGKATEAYRRVTEEVLKDAI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02615, putative plasmid partitioning protein Soj, phage(gi22091150), PHAGE_Natria_PhiCh1_NC_004084
Homolog/Ortholog E-Value: 1.00e-25
Locus 11: attR (Region 2)
Locus: attRORF Start: 212517
ORF Stop: 212530
Strand: Forward
Protein Sequence: TTTCATCACCTTTC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 12: DW953_02620 (Region 2)
Locus: DW953_02620ORF Start: 212774
ORF Stop: 213835
Strand: Backward
Protein Sequence: MSEKRRDHRGRILHNGEIQLSDGRYRFKYVDEMGKERCVYSWRLDHNDATPKGKRRTLSLREMEKKIQADHFEQIATNGGNMTVLELVEKYTSTKTGVRPTTVAGYGTVINLLKKDPFGKRRIDTVRISDAKCWLIHLQQVEKKSYSSIHSIRGVLRPAFQLAVDDDLIRKNSFQFQLMEVVVNDSVTREAISRAEERKFLRFVKEDPHFCRYYEGIYILFKTGLRISEFCGLTISDIDFKEHTIIIDHQLQKKSKIGYYIQETKTTSGTRKIPMTADVEECFRKIIEKRNPPKAEPMVDGKSGFLYFDKNESICYSLHWEHYFQHIIQKYNNTYKVQMPVITPHGRVIIRTS
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: DW953_02620, integrase, phage(gi571797859), PHAGE_Lactob_phiJB_NC_022775
Homolog/Ortholog E-Value: 1.14e-08
Locus 13: DW953_02625 (Region 2)
Locus: DW953_02625ORF Start: 213971
ORF Stop: 214180
Strand: Backward
Protein Sequence: MNHTEKTIPVWEKYSLNVSEAAEYYGIGEKRLRQIAGENEGADFILEVGSHIRFKRKLFEDYLDTASTV
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DW953_02625, transposase
Homolog/Ortholog E-Value: N/A
Locus 14: DW953_02630 (Region 2)
Locus: DW953_02630ORF Start: 214177
ORF Stop: 214992
Strand: Backward
Protein Sequence: MREEDTVCVGSDGLKYCKVCGEAKEAFFPKGGFMGMKKHSRQCACDRKVYEEEQKYFKDKEHRELVSRNTSICFDESRMEEWTFENADMSDTVMHRAKKYVDNWEEMKRNHIGCLFWGPVGTGKSFIAGCIANELLKQEVMVKMTNFNTIIDDIFPLADKTEYINALASYQLLIIDDLGVERNSEYALGIIFSVIDRRIRSGRPLIITTNLPLKEIKNETMLDKRRIYDRILEMCTPMYVGGTSKREVIASMKMEKAKTLLNTNRGEEDCE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DW953_02630, putative DnaC, phage(gi418488188), PHAGE_Lactob_c5_NC_019449
Homolog/Ortholog E-Value: 1.19e-24
Locus 15: DW953_02635 (Region 2)
Locus: DW953_02635ORF Start: 215007
ORF Stop: 215519
Strand: Backward
Protein Sequence: MKYEYMKESEQMLQYFQFPKFLLKLRISQTAKFLYMILYDRARISRKNSWIDKYGNVYLIFPIDELSVQIDKCKSSVKTALKELDDVGLLVRRSGEFSKPNHLYVKIPSDEIGLQPVDNKAVEKIVATEPEKPPLSGRKNGCGGVGNVAPSKVTEKYKSNKYHEVNYCYG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DW953_02635, hypothetical protein, phage(gi100030), PHAGE_Strept_9872_NC_031094
Homolog/Ortholog E-Value: 2.16e-14
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download